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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 2
  • cytosol 2
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041378 Potato cytosol, plastid 94.12 94.12
Solyc04g011810.1.1 Tomato cytosol, plastid 73.53 73.53
Solyc05g051720.1.1 Tomato cytosol 74.51 73.08
Solyc05g051730.1.1 Tomato cytosol 73.53 72.82
Solyc04g011830.1.1 Tomato cytosol, plastid 72.55 72.55
Solyc04g011840.1.1 Tomato cytosol 72.55 72.55
Solyc04g011860.1.1 Tomato cytosol, plastid 72.55 72.55
Solyc04g011870.1.1 Tomato cytosol, plastid 72.55 72.55
Solyc04g011790.1.1 Tomato cytosol, plastid 71.57 71.57
Solyc04g011800.1.1 Tomato cytosol, plastid 71.57 71.57
Solyc04g011850.1.1 Tomato cytosol 71.57 71.57
Solyc04g011780.1.1 Tomato extracellular 70.59 70.59
Solyc04g011820.1.1 Tomato cytosol 62.75 67.37
Solyc04g053110.1.1 Tomato cytosol 63.73 63.73
Solyc09g074590.1.1 Tomato cytosol 59.8 59.8
Solyc09g074600.1.1 Tomato cytosol 58.82 58.82
Solyc01g067460.1.1 Tomato cytosol 53.92 53.92
VIT_07s0104g01420.t01 Wine grape cytosol 54.9 52.83
GSMUA_Achr5P00380_001 Banana extracellular 51.96 51.46
TraesCS5B01G048400.1 Wheat cytosol 51.96 51.46
TraesCS5B01G049200.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054200.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054900.1 Wheat cytosol 51.96 51.46
TraesCS5A01G044100.1 Wheat cytosol 50.98 50.49
TraesCS5A01G044400.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048300.1 Wheat cytosol 50.98 50.49
TraesCS5D01G055000.1 Wheat cytosol 50.98 50.49
HORVU5Hr1G010870.1 Barley cytosol 50.0 49.51
HORVU5Hr1G010950.1 Barley cytosol 50.0 49.51
HORVU5Hr1G010960.1 Barley cytosol 50.0 49.51
TraesCS5A01G044700.1 Wheat cytosol 50.0 49.51
TraesCS5A01G044800.1 Wheat cytosol 50.0 49.51
TraesCS5A01G044900.1 Wheat cytosol 50.0 49.51
TraesCS5A01G045000.1 Wheat cytosol 50.0 49.51
TraesCS5B01G048900.1 Wheat cytosol 50.0 49.51
TraesCS5B01G049100.1 Wheat cytosol 50.0 49.51
TraesCS5D01G054000.1 Wheat cytosol 50.0 49.51
TraesCS5D01G054800.1 Wheat cytosol 50.0 49.51
TraesCS5A01G094600.1 Wheat cytosol 50.0 49.04
TraesCS5B01G100700.1 Wheat cytosol 50.0 49.04
TraesCS5B01G049000.1 Wheat cytosol 41.18 48.84
GSMUA_Achr11P... Banana cytosol, extracellular 49.02 48.54
GSMUA_Achr11P... Banana cytosol, extracellular 49.02 48.54
Os12t0538600-00 Rice cytosol, extracellular 49.02 48.54
TraesCS5B01G048600.1 Wheat cytosol 49.02 48.54
TraesCS5D01G055100.1 Wheat cytosol 49.02 48.54
Zm00001d040837_P001 Maize cytosol 49.02 48.54
HORVU5Hr1G025610.1 Barley cytosol 49.02 48.08
TraesCS5D01G106900.1 Wheat cytosol 49.02 48.08
EES00746 Sorghum cytosol 48.04 47.57
GSMUA_Achr11P... Banana cytosol 48.04 47.57
Os01t0368900-01 Rice cytosol 48.04 47.57
TraesCS5B01G101100.1 Wheat cytosol, extracellular 48.04 47.57
TraesCS5D01G054400.1 Wheat cytosol 48.04 47.57
Zm00001d027695_P001 Maize cytosol 48.04 47.12
Solyc01g067440.2.1 Tomato cytosol 47.06 47.06
EES00745 Sorghum cytosol 47.06 46.6
GSMUA_Achr8P09970_001 Banana cytosol 47.06 46.6
HORVU5Hr1G025680.1 Barley cytosol 47.06 46.6
HORVU5Hr1G025710.1 Barley cytosol, extracellular 47.06 46.6
Solyc06g054570.1.1 Tomato cytosol 47.06 46.6
TraesCS5A01G094900.1 Wheat extracellular 47.06 46.6
TraesCS5A01G095500.1 Wheat cytosol 47.06 46.6
TraesCS5B01G101600.1 Wheat cytosol, extracellular 47.06 46.6
TraesCS5D01G107500.1 Wheat cytosol, extracellular 47.06 46.6
TraesCS5D01G108100.1 Wheat cytosol, extracellular 47.06 46.6
TraesCS5A01G094700.1 Wheat cytosol 46.08 45.63
TraesCS5D01G107200.1 Wheat cytosol 46.08 45.63
Zm00001d040836_P001 Maize cytosol 46.08 45.63
Zm00001d023873_P001 Maize cytosol 46.08 45.19
GSMUA_Achr1P26720_001 Banana cytosol 45.1 44.66
GSMUA_AchrUn_... Banana cytosol, extracellular 45.1 44.66
TraesCS5B01G100900.1 Wheat cytosol 45.1 44.66
EES16092 Sorghum cytosol 45.1 43.81
GSMUA_Achr5P00370_001 Banana cytosol 44.12 43.69
Solyc06g008760.1.1 Tomato cytosol 43.14 43.56
Zm00001d023870_P001 Maize cytosol, extracellular 44.12 43.27
EES16097 Sorghum cytosol 45.1 42.99
OQU79243 Sorghum cytosol 45.1 42.99
GSMUA_Achr8P33660_001 Banana cytosol 43.14 42.72
TraesCS5A01G094800.1 Wheat cytosol 43.14 42.72
TraesCS3B01G504700.1 Wheat cytosol 43.14 42.31
Solyc06g008750.1.1 Tomato cytosol 42.16 42.16
TraesCS5B01G101000.1 Wheat cytosol 42.16 41.75
EES17138 Sorghum cytosol 43.14 41.51
Os12t0538700-01 Rice cytosol 42.16 41.35
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 42.16 41.35
TraesCS3A01G463000.1 Wheat cytosol 42.16 41.35
TraesCS3A01G463200.1 Wheat cytosol 42.16 41.35
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 42.16 41.35
TraesCS3D01G456900.1 Wheat cytosol 42.16 41.35
TraesCS5A01G094500.1 Wheat cytosol 42.16 41.35
TraesCS5B01G100600.1 Wheat cytosol 42.16 41.35
TraesCS5D01G106800.1 Wheat cytosol 42.16 41.35
HORVU5Hr1G033140.1 Barley cytosol 42.16 40.95
GSMUA_Achr7P03690_001 Banana cytosol 41.18 40.78
TraesCS5D01G107300.1 Wheat cytosol 41.18 40.78
HORVU3Hr1G099050.2 Barley cytosol 43.14 40.74
TraesCS3B01G506200.1 Wheat cytosol 41.18 40.38
TraesCS3B01G506500.1 Wheat cytosol 41.18 40.38
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 41.18 40.38
TraesCS3D01G457200.1 Wheat cytosol 41.18 40.38
TraesCS4D01G147300.1 Wheat cytosol 41.18 40.38
Zm00001d023869_P001 Maize cytosol 41.18 40.38
EES16093 Sorghum cytosol 41.18 40.0
HORVU3Hr1G099090.1 Barley cytosol 40.2 39.42
TraesCS3A01G462200.1 Wheat cytosol 40.2 39.42
TraesCS3B01G505300.1 Wheat cytosol 40.2 39.42
TraesCS3B01G506400.1 Wheat cytosol 40.2 39.42
EES02025 Sorghum cytosol 41.18 39.25
Solyc09g074580.1.1 Tomato cytosol 39.22 39.22
Solyc01g009910.1.1 Tomato mitochondrion, plastid 46.08 39.17
HORVU3Hr1G099150.1 Barley cytosol, extracellular 24.51 38.46
TraesCS3A01G462900.1 Wheat cytosol, extracellular 39.22 38.46
Solyc09g074570.1.1 Tomato cytosol 39.22 37.74
Os05t0149950-00 Rice cytosol, mitochondrion 42.16 37.72
HORVU5Hr1G025690.1 Barley cytosol 41.18 37.5
Solyc01g009900.2.1 Tomato cytosol, plastid 44.12 37.5
Zm00001d023872_P001 Maize cytosol, mitochondrion 38.24 37.14
Os11t0655900-01 Rice extracellular 39.22 37.04
Zm00001d042187_P001 Maize cytosol 40.2 36.94
Os11t0656000-00 Rice cytosol, plastid 39.22 36.7
Os11t0656400-00 Rice cytosol, plastid 39.22 36.7
Solyc01g009890.1.1 Tomato cytosol, plastid 46.08 36.15
Os11t0656700-00 Rice cytosol, plastid 38.24 35.78
EES16096 Sorghum cytosol 36.27 35.24
Zm00001d048720_P001 Maize cytosol 38.24 35.14
Solyc05g015910.1.1 Tomato cytosol 45.1 35.11
Os01t0936000-00 Rice cytosol 42.16 34.4
EES08918 Sorghum cytosol, plastid 35.29 34.29
TraesCS3A01G462800.1 Wheat extracellular 27.45 34.15
TraesCS3B01G506000.1 Wheat mitochondrion 27.45 34.15
Zm00001d048719_P001 Maize cytosol 36.27 33.64
EES08919 Sorghum cytosol 35.29 33.03
HORVU5Hr1G025560.1 Barley cytosol 42.16 31.62
Solyc08g036570.1.1 Tomato cytosol 36.27 29.37
HORVU0Hr1G010190.2 Barley cytosol 29.41 28.57
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgrInterPro:IPR002109UniProt:K4BPP1PFAM:PF00462PRINTS:PR00160PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF200SUPFAM:SSF52833EnsemblPlantsGene:Solyc04g011880.1EnsemblPlants:Solyc04g011880.1.1TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI00027661EB::::
Description
No Description!
Coordinates
chr4:-:4280042..4280350
Molecular Weight (calculated)
11375.2 Da
IEP (calculated)
7.186
GRAVY (calculated)
0.282
Length
102 amino acids
Sequence
(BLAST)
001: MEMVMKMGAQ SPVVIFSRST CCISHTIETL IRNFGANPIV YELDRLQNGK ELERALVDLG CQQIVPVVFI GNELVGGSNE IMSLNIRDKL KQLLIKANAI
101: WV
Best Arabidopsis Sequence Match ( AT1G03020.1 )
(BLAST)
001: MEKISNLLED KPVVIFSKTS CCMSHSIKSL ISGYGANSTV YELDEMSNGP EIERALVELG CKPTVPAVFI GQELVGGANQ LMSLQVRNQL ASLLRRAGAI
101: WI
Arabidopsis Description
GRXS1Monothiol glutaredoxin-S1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA68]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.