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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER89393
EES05647
EES05874
EES07800
EES07899
EES10633
EES10933
KXG27287
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 EES05647 AT3G27960.1 21798944
AT4G15700.1 KXG27287 AT1G22920.1 21798944
AT4G15700.1 EER89393 AT1G73360.1 21798944
AT4G15700.1 EES05874 AT1G73360.1 21798944
AT4G15700.1 EES07899 AT2G05230.1 21798944
AT4G15700.1 EES10633 AT2G05230.1 21798944
AT4G15700.1 EES10933 AT2G05230.1 21798944
AT4G15700.1 KXG34016 AT2G05230.1 21798944
AT4G15700.1 OQU85000 AT2G05230.1 21798944
AT4G15700.1 EES07899 AT2G05250.1 21798944
AT4G15700.1 EES10633 AT2G05250.1 21798944
AT4G15700.1 EES10933 AT2G05250.1 21798944
AT4G15700.1 KXG34016 AT2G05250.1 21798944
AT4G15700.1 OQU85000 AT2G05250.1 21798944
AT4G15700.1 EES07800 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048719_P001 Maize cytosol 86.24 85.45
EES08918 Sorghum cytosol, plastid 80.73 83.81
TraesCS4D01G147300.1 Wheat cytosol 68.81 72.12
EES16092 Sorghum cytosol 67.89 70.48
Os11t0656400-00 Rice cytosol, plastid 69.72 69.72
Os11t0656000-00 Rice cytosol, plastid 68.81 68.81
Os11t0656700-00 Rice cytosol, plastid 68.81 68.81
OQU79243 Sorghum cytosol 65.14 66.36
EES16097 Sorghum cytosol 64.22 65.42
GSMUA_Achr8P09970_001 Banana cytosol 58.72 62.14
EES16093 Sorghum cytosol 59.63 61.9
EES17138 Sorghum cytosol 59.63 61.32
EES00746 Sorghum cytosol 57.8 61.16
EES16096 Sorghum cytosol 55.05 57.14
EES00745 Sorghum cytosol 53.21 56.31
GSMUA_Achr11P... Banana cytosol, extracellular 53.21 56.31
EES02025 Sorghum cytosol 55.05 56.07
VIT_05s0020g01750.t01 Wine grape cytosol 50.46 53.4
Bra023688.1-P Field mustard cytosol 49.54 52.94
CDY68328 Canola cytosol 49.54 52.94
KRH02215 Soybean cytosol 49.54 52.94
VIT_05s0020g01760.t01 Wine grape cytosol 49.54 52.94
Bra006467.1-P Field mustard cytosol 48.62 51.96
CDX70828 Canola cytosol 48.62 51.96
CDX88929 Canola cytosol 48.62 51.96
CDY02610 Canola cytosol 48.62 51.96
KRH11238 Soybean cytosol 48.62 51.96
KRH21035 Soybean cytosol 48.62 51.96
AT5G18600.1 Thale cress cytosol 47.71 50.98
Bra002171.1-P Field mustard cytosol 47.71 50.98
CDX92597 Canola cytosol 47.71 50.98
CDY13904 Canola cytosol 47.71 50.98
KRH11237 Soybean cytosol 47.71 50.98
KRH50911 Soybean cytosol 47.71 50.98
AT3G21460.1 Thale cress mitochondrion 46.79 50.0
AT4G15700.1 Thale cress cytosol 46.79 50.0
Bra033501.1-P Field mustard cytosol 46.79 50.0
Bra033503.1-P Field mustard cytosol 46.79 50.0
CDY66333 Canola cytosol 46.79 50.0
KRH21036 Soybean cytosol 46.79 50.0
KRH50912 Soybean cytosol 46.79 50.0
PGSC0003DMT400058325 Potato cytosol 46.79 50.0
Solyc01g067460.1.1 Tomato cytosol 46.79 50.0
Solyc06g054570.1.1 Tomato cytosol 46.79 49.51
KRG96386 Soybean cytosol 45.87 49.51
KRH68125 Soybean cytosol 45.87 49.51
PGSC0003DMT400079099 Potato cytosol 44.04 49.48
AT4G15680.1 Thale cress cytosol 45.87 49.02
Bra001831.1-P Field mustard cytosol 45.87 49.02
CDY32431 Canola cytosol 45.87 49.02
CDY48891 Canola cytosol 45.87 49.02
PGSC0003DMT400058374 Potato cytosol 45.87 49.02
Solyc01g067440.2.1 Tomato cytosol 45.87 49.02
Bra033504.1-P Field mustard cytosol 43.12 48.96
AT4G15660.1 Thale cress cytosol, extracellular 44.95 48.04
AT4G15690.1 Thale cress cytosol 44.95 48.04
Bra023883.1-P Field mustard cytosol, plastid 44.95 48.04
CDY19270 Canola cytosol, plastid 44.95 48.04
CDY32430 Canola cytosol, plastid 44.95 48.04
CDY37292 Canola cytosol, plastid 44.95 48.04
CDY66332 Canola cytosol 44.95 48.04
PGSC0003DMT400029596 Potato cytosol 44.95 48.04
AT2G47870.1 Thale cress cytosol 44.95 47.57
KRH31919 Soybean cytosol, plasma membrane 44.04 47.52
KRH71536 Soybean extracellular 44.04 47.52
AT4G15670.1 Thale cress cytosol 44.04 47.06
Bra001830.1-P Field mustard cytosol, plastid 44.04 47.06
CDY22746 Canola cytosol 44.04 47.06
CDY48890 Canola cytosol, plastid 44.04 47.06
CDY54294 Canola cytosol 44.04 47.06
CDY54296 Canola cytosol 44.04 47.06
KRH31918 Soybean cytosol 44.04 47.06
KRH71537 Soybean cytosol 44.04 47.06
Solyc06g008750.1.1 Tomato cytosol 44.04 47.06
VIT_07s0104g01390.t01 Wine grape plasma membrane 44.04 47.06
EES05136 Sorghum cytosol 55.05 46.51
Bra012773.1-P Field mustard cytosol 43.12 46.08
Bra038075.1-P Field mustard cytosol 43.12 46.08
CDX90576 Canola cytosol 43.12 46.08
CDY09079 Canola cytosol 43.12 46.08
CDY09747 Canola cytosol 43.12 46.08
PGSC0003DMT400013649 Potato cytosol 43.12 46.08
Solyc09g074580.1.1 Tomato cytosol 43.12 46.08
Bra033499.1-P Field mustard cytosol 41.28 45.92
AT3G62950.1 Thale cress cytosol 43.12 45.63
Bra014380.1-P Field mustard cytosol 43.12 45.63
CDX89161 Canola cytosol 43.12 45.63
Bra038076.1-P Field mustard cytosol, extracellular 42.2 45.54
CDY09078 Canola cytosol, extracellular 42.2 45.54
CDY22745 Canola cytosol, extracellular 42.2 45.54
Bra007717.1-P Field mustard cytosol 32.11 45.45
CDY69190 Canola cytosol 43.12 45.19
KRG96387 Soybean cytosol 42.2 45.1
KRH68127 Soybean cytosol 42.2 45.1
PGSC0003DMT400029525 Potato cytosol 42.2 45.1
Solyc09g074590.1.1 Tomato cytosol 42.2 45.1
Solyc09g074600.1.1 Tomato cytosol 42.2 45.1
VIT_07s0104g01400.t01 Wine grape cytosol 42.2 45.1
CDX76677 Canola cytosol 42.2 44.66
CDY11464 Canola cytosol 42.2 44.66
CDY11465 Canola cytosol 42.2 44.66
PGSC0003DMT400042706 Potato cytosol 42.2 44.66
AT2G30540.1 Thale cress cytosol 41.28 44.12
Bra004424.1-P Field mustard cytosol 41.28 44.12
CDX80139 Canola cytosol 41.28 44.12
CDY53024 Canola cytosol 41.28 44.12
PGSC0003DMT400029597 Potato cytosol 41.28 44.12
PGSC0003DMT400041381 Potato cytosol, plastid 41.28 44.12
CDY53023 Canola cytosol 41.28 43.69
AT1G06830.1 Thale cress cytosol 39.45 43.43
Bra031540.1-P Field mustard cytosol 39.45 43.43
CDY06230 Canola cytosol 39.45 43.43
CDY09953 Canola cytosol 39.45 43.43
Bra021641.1-P Field mustard cytosol 40.37 43.14
CDY23990 Canola cytosol 40.37 43.14
CDY29666 Canola cytosol 40.37 43.14
CDY52638 Canola cytosol 40.37 43.14
EES10652 Sorghum cytosol 54.13 43.07
Bra004426.1-P Field mustard cytosol 40.37 42.72
CDX80138 Canola cytosol 40.37 42.72
CDY10229 Canola cytosol 38.53 42.42
AT2G47880.1 Thale cress cytosol 39.45 42.16
Bra018307.1-P Field mustard cytosol 39.45 42.16
CDX84825 Canola cytosol 39.45 42.16
CDX95739 Canola cytosol 39.45 42.16
CDX97824 Canola cytosol 39.45 42.16
CDY10745 Canola cytosol 39.45 42.16
KRH68129 Soybean cytosol 39.45 42.16
PGSC0003DMT400041380 Potato cytosol, plastid 39.45 42.16
Solyc04g011790.1.1 Tomato cytosol, plastid 39.45 42.16
CDY27469 Canola cytosol 40.37 41.9
CDY55528 Canola cytosol 40.37 41.9
CDY54881 Canola cytosol 37.61 41.41
AT3G62960.1 Thale cress cytosol 38.53 41.18
Bra007718.1-P Field mustard cytosol 38.53 41.18
CDX76678 Canola cytosol 38.53 41.18
CDY11466 Canola cytosol 38.53 41.18
KRG96389 Soybean cytosol 38.53 41.18
KRH31917 Soybean cytosol 38.53 41.18
KRH71538 Soybean cytosol 38.53 41.18
Solyc04g011840.1.1 Tomato cytosol 38.53 41.18
Solyc04g011870.1.1 Tomato cytosol, plastid 38.53 41.18
Bra021444.1-P Field mustard cytosol 39.45 40.95
Solyc06g008760.1.1 Tomato cytosol 37.61 40.59
Bra014379.1-P Field mustard cytosol 37.61 40.2
CDX89162 Canola cytosol 37.61 40.2
CDY68061 Canola cytosol 37.61 40.2
PGSC0003DMT400027946 Potato cytosol, plastid 37.61 40.2
PGSC0003DMT400041382 Potato cytosol 37.61 40.2
Solyc04g011830.1.1 Tomato cytosol, plastid 37.61 40.2
Solyc04g011850.1.1 Tomato cytosol 37.61 40.2
KRH31916 Soybean cytosol 34.86 40.0
PGSC0003DMT400041379 Potato cytosol, plastid 34.86 40.0
Bra003515.1-P Field mustard cytosol 36.7 39.22
Bra003517.1-P Field mustard cytosol, extracellular 36.7 39.22
CDX67910 Canola cytosol 36.7 39.22
PGSC0003DMT400027948 Potato cytosol, plastid 36.7 39.22
PGSC0003DMT400027950 Potato cytosol, plastid 36.7 39.22
PGSC0003DMT400027954 Potato cytosol, plastid 36.7 39.22
Solyc04g011860.1.1 Tomato cytosol, plastid 36.7 39.22
PGSC0003DMT400027952 Potato cytosol 33.95 38.95
Solyc04g011820.1.1 Tomato cytosol 33.95 38.95
PGSC0003DMT400027953 Potato cytosol, plastid 35.78 38.61
Solyc05g051720.1.1 Tomato cytosol 36.7 38.46
AT1G03020.1 Thale cress cytosol 35.78 38.24
Bra014382.1-P Field mustard cytosol 35.78 38.24
Bra032563.1-P Field mustard cytosol 35.78 38.24
Bra033366.1-P Field mustard cytosol 35.78 38.24
CDX89159 Canola cytosol 35.78 38.24
CDX89921 Canola cytosol 35.78 38.24
CDX93949 Canola cytosol 35.78 38.24
CDY25124 Canola cytosol 35.78 38.24
CDY32493 Canola cytosol 35.78 38.24
PGSC0003DMT400027947 Potato cytosol, plastid 35.78 38.24
PGSC0003DMT400027949 Potato cytosol, plastid 35.78 38.24
PGSC0003DMT400027951 Potato cytosol, plastid 35.78 38.24
PGSC0003DMT400041378 Potato cytosol, plastid 35.78 38.24
Solyc04g011800.1.1 Tomato cytosol, plastid 35.78 38.24
Solyc04g011810.1.1 Tomato cytosol, plastid 35.78 38.24
VIT_07s0104g01420.t01 Wine grape cytosol 36.7 37.74
PGSC0003DMT400077394 Potato cytosol 35.78 37.5
PGSC0003DMT400042707 Potato cytosol 34.86 37.25
Solyc04g053110.1.1 Tomato cytosol 34.86 37.25
Solyc05g051730.1.1 Tomato cytosol 34.86 36.89
Solyc09g074570.1.1 Tomato cytosol 35.78 36.79
AT3G62930.1 Thale cress cytosol 33.95 36.27
CDX76675 Canola cytosol 33.95 36.27
CDY18141 Canola cytosol 33.95 36.27
KRH31915 Soybean cytosol, plastid 34.86 36.19
PGSC0003DMT400077393 Potato cytosol 33.95 35.92
PGSC0003DMT400029673 Potato cytosol 34.86 35.85
Bra007714.1-P Field mustard cytosol 33.03 35.29
CDY11462 Canola cytosol 33.03 35.29
Solyc04g011780.1.1 Tomato extracellular 33.03 35.29
Solyc04g011880.1.1 Tomato cytosol, plastid 33.03 35.29
KRG96390 Soybean cytosol, plastid 33.95 35.24
KRH68130 Soybean cytosol, plastid 33.95 35.24
EER95872 Sorghum cytosol 51.38 33.73
Bra015532.1-P Field mustard cytosol 33.95 25.52
CDY71728 Canola cytosol 33.03 25.35
CDX97821 Canola mitochondrion 30.28 24.81
PGSC0003DMT400013650 Potato cytosol 27.52 10.17
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10UniProt:C5Y7E3EnsemblPlants:EES08919ProteinID:EES08919ProteinID:EES08919.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900
GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:IPR002109PFAM:PF00462
PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF72EnsemblPlantsGene:SORBI_3005G204000SUPFAM:SSF52833TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI0001A8660FRefSeq:XP_002449931.1SEG:seg::
Description
hypothetical protein
Coordinates
chr5:+:68949657..68950395
Molecular Weight (calculated)
11181.7 Da
IEP (calculated)
7.622
GRAVY (calculated)
0.295
Length
109 amino acids
Sequence
(BLAST)
001: MDRMAKLASE RAVVVFTASN CSMGDVVASL LNSLGVNAAV HDLDRDPRGQ EMERELASRL GAGAGGRGSP AVPAVFVGGH LVGGTSRVMA LHLAGELVPM
101: LKSAGALWL
Best Arabidopsis Sequence Match ( AT4G15680.1 )
(BLAST)
001: MDKLQKMISE KSVVIFSKNS CCMSHTIKTL FIDFGVNPTI YELDEINRGK EIEQALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRVGAL
101: WL
Arabidopsis Description
GRXS4Monothiol glutaredoxin-S4 [Source:UniProtKB/Swiss-Prot;Acc:O23419]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.