Factsheet for PGSC0003DMT400079099

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400023896
PGSC0003DMT400042166
PGSC0003DMT400067114
PGSC0003DMT400069203
PGSC0003DMT400069312
PGSC0003DMT400092645

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15700.1	PGSC0003DMT400023896	AT1G22920.1	21798944
AT4G15700.1	PGSC0003DMT400069203	AT1G22920.1	21798944
AT4G15700.1	PGSC0003DMT400069312	AT1G73360.1	21798944
AT4G15700.1	PGSC0003DMT400092645	AT2G05230.1	21798944
AT4G15700.1	PGSC0003DMT400092645	AT2G05250.1	21798944
AT4G15700.1	PGSC0003DMT400067114	AT4G32570.1	21798944
AT4G15700.1	PGSC0003DMT400042166	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g054570.1.1	Tomato	cytosol	95.88	90.29
PGSC0003DMT400058374	Potato	cytosol	78.35	74.51
Bra033504.1-P	Field mustard	cytosol	68.04	68.75
CDY66332	Canola	cytosol	68.04	64.71
AT5G18600.1	Thale cress	cytosol	65.98	62.75
Bra002171.1-P	Field mustard	cytosol	65.98	62.75
Bra006467.1-P	Field mustard	cytosol	65.98	62.75
CDX70828	Canola	cytosol	65.98	62.75
CDX88929	Canola	cytosol	65.98	62.75
CDX92597	Canola	cytosol	65.98	62.75
CDY13904	Canola	cytosol	65.98	62.75
CDY54296	Canola	cytosol	65.98	62.75
KRH02215	Soybean	cytosol	65.98	62.75
KRH50911	Soybean	cytosol	65.98	62.75
VIT_05s0020g01750.t01	Wine grape	cytosol	65.98	62.14
AT4G15700.1	Thale cress	cytosol	64.95	61.76
Bra012773.1-P	Field mustard	cytosol	64.95	61.76
CDX90576	Canola	cytosol	64.95	61.76
CDY02610	Canola	cytosol	64.95	61.76
CDY09747	Canola	cytosol	64.95	61.76
Bra033499.1-P	Field mustard	cytosol	61.86	61.22
AT4G15690.1	Thale cress	cytosol	63.92	60.78
Bra023688.1-P	Field mustard	cytosol	63.92	60.78
Bra033503.1-P	Field mustard	cytosol	63.92	60.78
CDY66333	Canola	cytosol	63.92	60.78
CDY68328	Canola	cytosol	63.92	60.78
AT4G15660.1	Thale cress	cytosol, extracellular	62.89	59.8
AT4G15670.1	Thale cress	cytosol	62.89	59.8
AT4G15680.1	Thale cress	cytosol	62.89	59.8
CDY54294	Canola	cytosol	62.89	59.8
Bra033501.1-P	Field mustard	cytosol	61.86	58.82
KRH11237	Soybean	cytosol	61.86	58.82
Bra038076.1-P	Field mustard	cytosol, extracellular	60.82	58.42
CDY09078	Canola	cytosol, extracellular	60.82	58.42
CDY22745	Canola	cytosol, extracellular	60.82	58.42
KRH21036	Soybean	cytosol	60.82	57.84
CDY69190	Canola	cytosol	61.86	57.69
CDY22746	Canola	cytosol	59.79	56.86
Bra038075.1-P	Field mustard	cytosol	58.76	55.88
CDY09079	Canola	cytosol	58.76	55.88
GSMUA_Achr11P...	Banana	cytosol	57.73	54.37
GSMUA_Achr5P00380_001	Banana	extracellular	55.67	52.43
TraesCS5B01G049000.1	Wheat	cytosol	46.39	52.33
PGSC0003DMT400029525	Potato	cytosol	54.64	51.96
PGSC0003DMT400029597	Potato	cytosol	54.64	51.96
TraesCS5D01G107300.1	Wheat	cytosol	54.64	51.46
PGSC0003DMT400058325	Potato	cytosol	53.61	50.98
TraesCS5A01G094500.1	Wheat	cytosol	54.64	50.96
TraesCS5B01G100600.1	Wheat	cytosol	54.64	50.96
TraesCS5D01G106800.1	Wheat	cytosol	54.64	50.96
GSMUA_Achr1P26720_001	Banana	cytosol	53.61	50.49
GSMUA_Achr5P00370_001	Banana	cytosol	53.61	50.49
GSMUA_Achr8P09970_001	Banana	cytosol	53.61	50.49
GSMUA_AchrUn_...	Banana	cytosol, extracellular	53.61	50.49
Os01t0368900-01	Rice	cytosol	53.61	50.49
TraesCS5B01G101000.1	Wheat	cytosol	53.61	50.49
Zm00001d040837_P001	Maize	cytosol	53.61	50.49
HORVU5Hr1G033140.1	Barley	cytosol	54.64	50.48
Os12t0538700-01	Rice	cytosol	53.61	50.0
TraesCS4D01G147300.1	Wheat	cytosol	53.61	50.0
Zm00001d023869_P001	Maize	cytosol	53.61	50.0
EES00745	Sorghum	cytosol	52.58	49.51
GSMUA_Achr11P...	Banana	cytosol, extracellular	52.58	49.51
GSMUA_Achr8P33660_001	Banana	cytosol	52.58	49.51
Os12t0538600-00	Rice	cytosol, extracellular	52.58	49.51
TraesCS5A01G044100.1	Wheat	cytosol	52.58	49.51
TraesCS5A01G094700.1	Wheat	cytosol	52.58	49.51
TraesCS5A01G094800.1	Wheat	cytosol	52.58	49.51
TraesCS5A01G094900.1	Wheat	extracellular	52.58	49.51
TraesCS5B01G048300.1	Wheat	cytosol	52.58	49.51
TraesCS5B01G100900.1	Wheat	cytosol	52.58	49.51
TraesCS5D01G054000.1	Wheat	cytosol	52.58	49.51
TraesCS5D01G107200.1	Wheat	cytosol	52.58	49.51
Zm00001d040836_P001	Maize	cytosol	52.58	49.51
HORVU5Hr1G025610.1	Barley	cytosol	52.58	49.04
PGSC0003DMT400042707	Potato	cytosol	51.55	49.02
EES16093	Sorghum	cytosol	52.58	48.57
EES00746	Sorghum	cytosol	51.55	48.54
HORVU5Hr1G010960.1	Barley	cytosol	51.55	48.54
HORVU5Hr1G025680.1	Barley	cytosol	51.55	48.54
PGSC0003DMT400042706	Potato	cytosol	51.55	48.54
TraesCS5A01G044700.1	Wheat	cytosol	51.55	48.54
TraesCS5A01G095500.1	Wheat	cytosol	51.55	48.54
TraesCS5B01G048400.1	Wheat	cytosol	51.55	48.54
TraesCS5B01G048900.1	Wheat	cytosol	51.55	48.54
TraesCS5B01G049200.1	Wheat	cytosol	51.55	48.54
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	51.55	48.54
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	51.55	48.54
TraesCS5D01G054800.1	Wheat	cytosol	51.55	48.54
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	51.55	48.54
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	51.55	48.54
TraesCS5A01G094600.1	Wheat	cytosol	51.55	48.08
TraesCS5B01G100700.1	Wheat	cytosol	51.55	48.08
TraesCS5D01G106900.1	Wheat	cytosol	51.55	48.08
Zm00001d023870_P001	Maize	cytosol, extracellular	51.55	48.08
Zm00001d023873_P001	Maize	cytosol	51.55	48.08
Zm00001d027695_P001	Maize	cytosol	51.55	48.08
GSMUA_Achr7P03690_001	Banana	cytosol	50.52	47.57
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	50.52	47.57
TraesCS5A01G044400.1	Wheat	cytosol	50.52	47.57
TraesCS5B01G049100.1	Wheat	cytosol	50.52	47.57
TraesCS5D01G055100.1	Wheat	cytosol	50.52	47.57
PGSC0003DMT400027952	Potato	cytosol	46.39	47.37
EES17138	Sorghum	cytosol	51.55	47.17
PGSC0003DMT400041378	Potato	cytosol, plastid	49.48	47.06
EES16092	Sorghum	cytosol	50.52	46.67
TraesCS5A01G044900.1	Wheat	cytosol	49.48	46.6
TraesCS5A01G045000.1	Wheat	cytosol	49.48	46.6
TraesCS5B01G048600.1	Wheat	cytosol	49.48	46.6
TraesCS5D01G054200.1	Wheat	cytosol	49.48	46.6
TraesCS5D01G054900.1	Wheat	cytosol	49.48	46.6
TraesCS5D01G055000.1	Wheat	cytosol	49.48	46.6
HORVU5Hr1G025690.1	Barley	cytosol	53.61	46.43
PGSC0003DMT400041380	Potato	cytosol, plastid	48.45	46.08
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.45	45.63
HORVU5Hr1G010950.1	Barley	cytosol	48.45	45.63
TraesCS5A01G044800.1	Wheat	cytosol	48.45	45.63
TraesCS5D01G054400.1	Wheat	cytosol	48.45	45.63
PGSC0003DMT400013649	Potato	cytosol	47.42	45.1
PGSC0003DMT400027948	Potato	cytosol, plastid	47.42	45.1
PGSC0003DMT400027951	Potato	cytosol, plastid	47.42	45.1
PGSC0003DMT400029596	Potato	cytosol	47.42	45.1
PGSC0003DMT400041381	Potato	cytosol, plastid	47.42	45.1
Os11t0656000-00	Rice	cytosol, plastid	50.52	44.95
Os11t0656400-00	Rice	cytosol, plastid	50.52	44.95
OQU79243	Sorghum	cytosol	49.48	44.86
EES08918	Sorghum	cytosol, plastid	48.45	44.76
HORVU5Hr1G010870.1	Barley	cytosol	47.42	44.66
PGSC0003DMT400077393	Potato	cytosol	47.42	44.66
Os11t0655900-01	Rice	extracellular	49.48	44.44
PGSC0003DMT400077394	Potato	cytosol	47.42	44.23
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	47.42	44.23
TraesCS3A01G462200.1	Wheat	cytosol	47.42	44.23
TraesCS3A01G463000.1	Wheat	cytosol	47.42	44.23
TraesCS3B01G504700.1	Wheat	cytosol	47.42	44.23
TraesCS3B01G506200.1	Wheat	cytosol	47.42	44.23
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	47.42	44.23
TraesCS3D01G456900.1	Wheat	cytosol	47.42	44.23
Zm00001d048720_P001	Maize	cytosol	50.52	44.14
PGSC0003DMT400027954	Potato	cytosol, plastid	46.39	44.12
EES08919	Sorghum	cytosol	49.48	44.04
Os11t0656700-00	Rice	cytosol, plastid	49.48	44.04
EES02025	Sorghum	cytosol	48.45	43.93
EES16097	Sorghum	cytosol	48.45	43.93
PGSC0003DMT400027953	Potato	cytosol, plastid	45.36	43.56
PGSC0003DMT400029673	Potato	cytosol	47.42	43.4
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	46.39	43.27
PGSC0003DMT400027946	Potato	cytosol, plastid	45.36	43.14
PGSC0003DMT400027949	Potato	cytosol, plastid	45.36	43.14
PGSC0003DMT400027950	Potato	cytosol, plastid	45.36	43.14
PGSC0003DMT400041382	Potato	cytosol	45.36	43.14
Zm00001d048719_P001	Maize	cytosol	48.45	42.73
TraesCS3A01G463200.1	Wheat	cytosol	45.36	42.31
TraesCS3B01G505300.1	Wheat	cytosol	45.36	42.31
PGSC0003DMT400027947	Potato	cytosol, plastid	44.33	42.16
Zm00001d023872_P001	Maize	cytosol, mitochondrion	45.36	41.9
Zm00001d042187_P001	Maize	cytosol	47.42	41.44
HORVU3Hr1G099090.1	Barley	cytosol	44.33	41.35
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	44.33	41.35
TraesCS3B01G506400.1	Wheat	cytosol	44.33	41.35
TraesCS3B01G506500.1	Wheat	cytosol	44.33	41.35
TraesCS3D01G457200.1	Wheat	cytosol	44.33	41.35
PGSC0003DMT400041379	Potato	cytosol, plastid	40.21	41.05
Os05t0149950-00	Rice	cytosol, mitochondrion	47.42	40.35
EES16096	Sorghum	cytosol	42.27	39.05
HORVU5Hr1G025560.1	Barley	cytosol	54.64	38.97
HORVU3Hr1G099050.2	Barley	cytosol	43.3	38.89
PGSC0003DMT400013427	Potato	mitochondrion, plastid	47.42	38.33
Os01t0936000-00	Rice	cytosol	47.42	36.8
PGSC0003DMT400013435	Potato	cytosol, plastid	44.33	35.83
PGSC0003DMT400013430	Potato	cytosol	46.39	34.62
PGSC0003DMT400006076	Potato	plastid	47.42	34.33
HORVU0Hr1G010190.2	Barley	cytosol	37.11	34.29
TraesCS3A01G462800.1	Wheat	extracellular	28.87	34.15
TraesCS3B01G506000.1	Wheat	mitochondrion	28.87	34.15
PGSC0003DMT400046079	Potato	cytosol	45.36	34.11
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	20.62	30.77
PGSC0003DMT400013650	Potato	cytosol	37.11	12.2

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M1D183	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400030784	PGSC:PGSC0003DMG400030784
EnsemblPlants:PGSC0003DMT400079099	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF115	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000295D621	:	:	:

Description

Glutaredoxin family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030784]

Coordinates

chr6:+:40917983..40918948

Molecular Weight (calculated)

10384.8 Da

IEP (calculated)

5.792

GRAVY (calculated)

0.281

Length

97 amino acids

Sequence
(BLAST)

1: MVTEKPVVIF SKTGCCMSYS IKSFFSDLGV NTAVYELDEM QRAGREIEAV LSNLGCNPTV PAVFIGGQMV GGESEVMSLH LQGALKPKLK TAGALWV

Best Arabidopsis Sequence Match ( AT4G15700.1 )
(BLAST)

001: MENLQKMISE KSVVIFSKNS CCMSHTIKTL FLDLGVNPTI YELDEISRGK EIEHALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL

Arabidopsis Description

GRXS3Monothiol glutaredoxin-S3 [Source:UniProtKB/Swiss-Prot;Acc:O23421]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.