Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065650.2.1 | Tomato | nucleus | 91.8 | 91.8 |
| VIT_04s0008g04950.t01 | Wine grape | plastid | 55.27 | 53.51 |
| KRH52520 | Soybean | cytosol, plastid | 45.67 | 47.22 |
| KRH61848 | Soybean | cytosol, plastid | 45.43 | 46.75 |
| KRH05071 | Soybean | nucleus | 34.43 | 38.79 |
| AT4G32570.1 | Thale cress | nucleus | 31.15 | 36.84 |
| Bra040086.1-P | Field mustard | nucleus | 30.45 | 36.41 |
| CDY23332 | Canola | nucleus | 30.21 | 36.24 |
| CDY51673 | Canola | nucleus | 29.98 | 35.75 |
| CDX68863 | Canola | nucleus | 28.57 | 35.47 |
| Bra011357.1-P | Field mustard | nucleus | 28.57 | 35.47 |
| CDX75256 | Canola | nucleus | 28.34 | 35.07 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.7 | 34.86 |
| GSMUA_Achr6P01670_001 | Banana | cytosol | 29.04 | 34.16 |
| GSMUA_Achr2P08320_001 | Banana | nucleus | 23.65 | 32.27 |
| CDY30950 | Canola | nucleus | 16.16 | 29.49 |
| CDX83601 | Canola | mitochondrion | 14.29 | 20.89 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400067114 | EnsemblPlantsGene:PGSC0003DMG400026089 | EntrezGene:102603871 | InterPro:IPR010399 | InterPro:Tify_dom | PANTHER:PTHR33077 |
| PANTHER:PTHR33077:SF8 | PFAM:PF06200 | PFscan:PS51320 | PGSC:PGSC0003DMG400026089 | RefSeq:XP_006353654.1 | SEG:seg |
| SMART:SM00979 | UniParc:UPI000295493F | UniProt:M1CGQ2 | MapMan:15.5.45 | : | : |
Description
Protein TIFY 8 [Source:PGSC_GENE;Acc:PGSC0003DMG400026089]
Coordinates
chr6:-:46128484..46135940
Molecular Weight (calculated)
44705.0 Da
IEP (calculated)
9.812
GRAVY (calculated)
-0.544
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHIQSNKSV SGTATAADEV KPAATTFHDF LGKGYPQDSS PGMSGRVVLP SEASPSASVS LGASSGGGRG PISTTSDLGS ERVVGNHFEG VPFYGLRGEL
101: SGPETSNRLL GTKRSNSDSL MGSTRDKFAM LRSDALESSH MQKLLRNAGG ERRGRPQDQE MSFVMHPMRP LHASLISQPS ATGRTDVNAS KWDRVIPVNV
201: GPTLQYPPRA SHVLPFGYQS SSNRFADANA GPSNISQAAD EGSRTGIKGS GILSSINASG GISDRSLSGV PLSGAKQKST LHFSDLESSN PCRQGSSPAG
301: SQMTIFYGGQ AHVFDNVHPN KADVIMSLAG SNGGSWSTTY APKPAARPST GENYSPKAEN ETTKGNNLAL IREFHGRSSG KAGFTHGFGS GDHISIPQGV
401: LRGVSTTKEA KTAVQVAENV TDEKRDM
101: SGPETSNRLL GTKRSNSDSL MGSTRDKFAM LRSDALESSH MQKLLRNAGG ERRGRPQDQE MSFVMHPMRP LHASLISQPS ATGRTDVNAS KWDRVIPVNV
201: GPTLQYPPRA SHVLPFGYQS SSNRFADANA GPSNISQAAD EGSRTGIKGS GILSSINASG GISDRSLSGV PLSGAKQKST LHFSDLESSN PCRQGSSPAG
301: SQMTIFYGGQ AHVFDNVHPN KADVIMSLAG SNGGSWSTTY APKPAARPST GENYSPKAEN ETTKGNNLAL IREFHGRSSG KAGFTHGFGS GDHISIPQGV
401: LRGVSTTKEA KTAVQVAENV TDEKRDM
001: MMVNHNNGQR PTDIDSRLRQ TEQDKLLFHD FLGSKNPTLA STSMADHRLP PDNKAAKAAM TPSTASASSA GGLGGLSSTS DLVERHSGGG NHLDGIQLFG
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGDFFLKKT RFQQKFWLAS YKY
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGDFFLKKT RFQQKFWLAS YKY
Arabidopsis Description
TIFY8Protein TIFY 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84MB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.