Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G32570.1 | KRH14510 | AT2G30880.1 | 21798944 |
| AT4G32570.1 | KRH73621 | AT2G30880.1 | 21798944 |
| AT4G32570.1 | KRH25249 | AT3G03000.1 | 21798944 |
| AT4G32570.1 | KRH30413 | AT3G03000.1 | 21798944 |
| AT4G32570.1 | KRH02371 | AT3G06430.1 | 21798944 |
| AT4G32570.1 | KRH02451 | AT3G06430.1 | 21798944 |
| AT4G32570.1 | KRH37687 | AT3G06430.1 | 21798944 |
| AT4G32570.1 | KRH01133 | AT3G28715.1 | 21798944 |
| AT4G32570.1 | KRH40128 | AT3G28715.1 | 21798944 |
| AT4G32570.1 | KRH56450 | AT4G36690.1 | 21798944 |
| AT4G32570.1 | KRH64800 | AT4G36690.1 | 21798944 |
| AT4G32570.1 | KRH07289 | AT5G48385.1 | 21798944 |
| AT4G32570.1 | KRH66280 | AT5G48385.1 | 21798944 |
| AT4G32570.1 | KRH66282 | AT5G48385.1 | 21798944 |
| AT4G32570.1 | KRH10215 | AT5G59210.1 | 21798944 |
| AT4G32570.1 | KRH23112 | AT5G59210.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61848 | Soybean | cytosol, plastid | 91.28 | 90.84 |
| KRH05071 | Soybean | nucleus | 52.06 | 56.73 |
| VIT_04s0008g04950.t01 | Wine grape | plastid | 56.66 | 53.06 |
| PGSC0003DMT400067114 | Potato | nucleus | 47.22 | 45.67 |
| Solyc06g065650.2.1 | Tomato | nucleus | 46.73 | 45.2 |
| AT4G32570.1 | Thale cress | nucleus | 36.32 | 41.55 |
| Bra040086.1-P | Field mustard | nucleus | 34.38 | 39.78 |
| CDY51673 | Canola | nucleus | 34.38 | 39.66 |
| CDY23332 | Canola | nucleus | 34.14 | 39.61 |
| CDX68863 | Canola | nucleus | 32.45 | 38.95 |
| Bra011357.1-P | Field mustard | nucleus | 32.2 | 38.66 |
| CDX75256 | Canola | nucleus | 32.2 | 38.55 |
| GSMUA_Achr6P01670_001 | Banana | cytosol | 28.33 | 32.23 |
| CDY30950 | Canola | nucleus | 18.16 | 32.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.94 | 31.5 |
| GSMUA_Achr2P08320_001 | Banana | nucleus | 23.24 | 30.67 |
| CDX83601 | Canola | mitochondrion | 16.46 | 23.29 |
Protein Annotations
| EntrezGene:100807222 | MapMan:15.5.45 | EMBL:ACUP02003423 | EnsemblPlantsGene:GLYMA_06G072700 | GO:GO:0003674 | GO:GO:0003714 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 | GO:GO:1903507 | GO:GO:2000022 | UniProt:I1K8Z7 |
| InterPro:IPR010399 | EnsemblPlants:KRH52520 | ProteinID:KRH52520 | ProteinID:KRH52520.1 | PFAM:PF06200 | PFscan:PS51320 |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF8 | SMART:SM00979 | InterPro:Tify_dom | UniParc:UPI000233A453 | : |
Description
hypothetical protein
Coordinates
chr6:-:5601351..5607592
Molecular Weight (calculated)
43500.9 Da
IEP (calculated)
10.094
GRAVY (calculated)
-0.515
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVLLRMAQP HNGNTNNTSN QQLVLHDFLG MRPAADSPKT ADVRLPEPSA SASSTGGRGP FSATSDIASE KQVGNHLEGV PFYGPRSDFS GTEISNRLVG
101: SKRSNSDSTF MGSSRDAFQL VPDSFQNSHL MKVLRNAAGG ERPRRPNDDA VLLGMQSMKP SSSQIFQPPT STKIDANKWE RSILMNVGPS MQHPPRGVQL
201: APFVHQMASS KIRDTNAGPS FISQSAADEG SRTGIKGPGI LSSAAATATE KSIPSAVMLG GSRPKPGTNV VESSTHPSSQ HGLTSASRQM TIFYGGQAHV
301: FDDVHPHKAD VIMALAGSNG GSWSTAFSPK SAVKMVNDGI LHSGENETGV VSNAAFPQEL HGKLSITGSS SHAIGLGDRV TTPAGKHHGN VFAKDTRNPV
401: QPPDPSSEDK RAQ
101: SKRSNSDSTF MGSSRDAFQL VPDSFQNSHL MKVLRNAAGG ERPRRPNDDA VLLGMQSMKP SSSQIFQPPT STKIDANKWE RSILMNVGPS MQHPPRGVQL
201: APFVHQMASS KIRDTNAGPS FISQSAADEG SRTGIKGPGI LSSAAATATE KSIPSAVMLG GSRPKPGTNV VESSTHPSSQ HGLTSASRQM TIFYGGQAHV
301: FDDVHPHKAD VIMALAGSNG GSWSTAFSPK SAVKMVNDGI LHSGENETGV VSNAAFPQEL HGKLSITGSS SHAIGLGDRV TTPAGKHHGN VFAKDTRNPV
401: QPPDPSSEDK RAQ
001: MMVNHNNGQR PTDIDSRLRQ TEQDKLLFHD FLGSKNPTLA STSMADHRLP PDNKAAKAAM TPSTASASSA GGLGGLSSTS DLVERHSGGG NHLDGIQLFG
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGREHQGSI ISRGRDIRDP VHRSDPEKEA T
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGREHQGSI ISRGRDIRDP VHRSDPEKEA T
Arabidopsis Description
TIFY8Protein TIFY 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84MB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.