Factsheet for AT4G32570.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23332	Canola	nucleus	81.16	82.3
Bra040086.1-P	Field mustard	nucleus	80.89	81.79
CDY51673	Canola	nucleus	79.5	80.17
CDX68863	Canola	nucleus	71.19	74.71
Bra011357.1-P	Field mustard	nucleus	70.36	73.84
CDX75256	Canola	nucleus	70.36	73.62
CDY30950	Canola	nucleus	34.9	53.85
KRH61848	Soybean	cytosol, plastid	42.66	37.11
KRH52520	Soybean	cytosol, plastid	41.55	36.32
VIT_04s0008g04950.t01	Wine grape	plastid	42.94	35.15
CDX83601	Canola	mitochondrion	27.98	34.59
Solyc06g065650.2.1	Tomato	nucleus	37.12	31.38
PGSC0003DMT400067114	Potato	nucleus	36.84	31.15
KRH05071	Soybean	nucleus	32.41	30.87
GSMUA_Achr6P01670_001	Banana	cytosol	25.48	25.34
GSMUA_Achr2P08320_001	Banana	nucleus	20.78	23.96
GSMUA_AchrUn_...	Banana	cytosol	21.05	23.24

Protein Annotations

MapMan:15.5.45	EntrezGene:829392	ProteinID:AEE86081.1	ArrayExpress:AT4G32570	EnsemblPlantsGene:AT4G32570	RefSeq:AT4G32570
TAIR:AT4G32570	RefSeq:AT4G32570-TAIR-G	EnsemblPlants:AT4G32570.1	TAIR:AT4G32570.1	EMBL:AY086431	Unigene:At.48928
EMBL:BT006431	ProteinID:CAA18604.1	ProteinID:CAB79974.1	GO:GO:0003674	GO:GO:0003714	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009987	GO:GO:0031347
GO:GO:1903507	GO:GO:2000022	InterPro:IPR010399	RefSeq:NP_567898.1	PFAM:PF06200	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PFscan:PS51320	PANTHER:PTHR33077
PANTHER:PTHR33077:SF8	UniProt:Q84MB2	SMART:SM00979	Symbol:TIFY8	InterPro:Tify_dom	UniParc:UPI0000162B6E
SEG:seg	:	:	:	:	:

Description

TIFY8Protein TIFY 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84MB2]

Coordinates

chr4:-:15716232..15718867

Molecular Weight (calculated)

38735.0 Da

IEP (calculated)

10.031

GRAVY (calculated)

-0.806

Length

361 amino acids

Sequence
(BLAST)

001: MMVNHNNGQR PTDIDSRLRQ TEQDKLLFHD FLGSKNPTLA STSMADHRLP PDNKAAKAAM TPSTASASSA GGLGGLSSTS DLVERHSGGG NHLDGIQLFG
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGREHQGSI ISRGRDIRDP VHRSDPEKEA T

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.