Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30950 | Canola | nucleus | 58.56 | 73.08 |
| CDY51673 | Canola | nucleus | 39.38 | 32.12 |
| CDY23332 | Canola | nucleus | 39.04 | 32.02 |
| Bra040086.1-P | Field mustard | nucleus | 38.01 | 31.09 |
| CDX75256 | Canola | nucleus | 33.9 | 28.7 |
| CDX68863 | Canola | nucleus | 33.56 | 28.49 |
| AT4G32570.1 | Thale cress | nucleus | 34.59 | 27.98 |
| KRH05071 | Soybean | nucleus | 21.92 | 16.89 |
| KRH52520 | Soybean | cytosol, plastid | 23.29 | 16.46 |
| KRH61848 | Soybean | cytosol, plastid | 21.92 | 15.42 |
| VIT_04s0008g04950.t01 | Wine grape | plastid | 21.92 | 14.51 |
| PGSC0003DMT400067114 | Potato | nucleus | 20.89 | 14.29 |
| Solyc06g065650.2.1 | Tomato | nucleus | 20.89 | 14.29 |
| GSMUA_Achr2P08320_001 | Banana | nucleus | 13.36 | 12.46 |
| GSMUA_Achr6P01670_001 | Banana | cytosol | 13.01 | 10.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.27 | 9.17 |
Protein Annotations
| EnsemblPlants:CDX83601 | EnsemblPlantsGene:GSBRNA2T00139260001 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF8 | ProteinID:CDX83601 | ProteinID:CDX83601.1 |
| SEG:seg | UniParc:UPI0004EEB355 | MapMan:35.1 | : | : | : |
Description
BnaC07g23410D
Coordinates
chrLK031833:+:903953..906756
Molecular Weight (calculated)
32786.4 Da
IEP (calculated)
10.734
GRAVY (calculated)
-0.538
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIKNILNIF RHLLKLRTAV TQNNATGLEA LSDQTDKTNK LCIEDHGLRR KKNTKEELSY DHRIDTDDGR RLSRRLLRIL REKKDRHPAP TRTPRAKLVS
101: TATNGPSLVG LAAPPETRAR SNSDSQFTAL HWSKMLRNGP GSLSMNMNHM ANQPPRGGGG QISHLLHQLS SSRFKDENVV PSVISQTAAD EGSRTGMKGP
201: GVMSPFTMPN PSRFECFTPS RCDVSSLVML CPQVSFNLRT NSCSHQSRTC KALFLYKHVN SCSLVYIKFY LQHNTLLHSS HIFSQVPSQI LF
101: TATNGPSLVG LAAPPETRAR SNSDSQFTAL HWSKMLRNGP GSLSMNMNHM ANQPPRGGGG QISHLLHQLS SSRFKDENVV PSVISQTAAD EGSRTGMKGP
201: GVMSPFTMPN PSRFECFTPS RCDVSSLVML CPQVSFNLRT NSCSHQSRTC KALFLYKHVN SCSLVYIKFY LQHNTLLHSS HIFSQVPSQI LF
001: MMVNHNNGQR PTDIDSRLRQ TEQDKLLFHD FLGSKNPTLA STSMADHRLP PDNKAAKAAM TPSTASASSA GGLGGLSSTS DLVERHSGGG NHLDGIQLFG
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGREHQGSI ISRGRDIRDP VHRSDPEKEA T
101: PRSDVSGSIM SNRFSGNKRS NSDSHFTTQE HPETLHWSKL LRNGPGSFSM NVNPLANQPP RGGGQISHLL HQLSTSRFKD ENVGPSVIAQ TAADEGSRTG
201: MKGPGILSSF TMPNSSKLES FAPSNTGNRK DLASSTKQMT IFYGGQAHVF DDVHPNKADV IMALAGSSGG SWSTGLSHKP KSKNNTSDGP YKLGQMYEGG
301: SSKETPQMPP EFRARPSHQP TSSACHRIFT QPGREHQGSI ISRGRDIRDP VHRSDPEKEA T
Arabidopsis Description
TIFY8Protein TIFY 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84MB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.