Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86307 | Canola | nucleus | 89.36 | 96.78 |
| CDY00062 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.12 | 92.02 |
| CDY05684 | Canola | cytosol | 28.2 | 88.2 |
| CDY48750 | Canola | cytosol | 28.57 | 87.67 |
| CDY00066 | Canola | cytosol | 28.01 | 84.83 |
| AT5G48385.1 | Thale cress | cytosol | 28.94 | 83.87 |
| KRH66282 | Soybean | cytosol | 20.78 | 61.54 |
| KRH07289 | Soybean | cytosol | 20.72 | 61.36 |
| KRH66280 | Soybean | cytosol | 20.53 | 61.03 |
| VIT_07s0151g00650.t01 | Wine grape | endoplasmic reticulum, extracellular | 21.15 | 60.75 |
| PGSC0003DMT400071153 | Potato | nucleus | 20.35 | 60.37 |
| Solyc06g082930.2.1 | Tomato | nucleus | 19.91 | 60.19 |
| PGSC0003DMT400053214 | Potato | cytosol | 19.98 | 59.16 |
| Solyc06g007640.2.1 | Tomato | nucleus | 19.54 | 58.96 |
| GSMUA_Achr2P05710_001 | Banana | nucleus | 6.74 | 56.19 |
| GSMUA_Achr8P29000_001 | Banana | nucleus | 17.87 | 53.52 |
| GSMUA_Achr9P08130_001 | Banana | cytosol | 17.69 | 52.96 |
| TraesCS5A01G168100.1 | Wheat | cytosol | 17.5 | 52.5 |
| HORVU5Hr1G051330.1 | Barley | cytosol | 17.44 | 52.32 |
| Zm00001d019892_P001 | Maize | nucleus | 12.99 | 51.85 |
| EES02294 | Sorghum | nucleus | 17.13 | 51.68 |
| TraesCS5D01G172300.2 | Wheat | cytosol | 17.69 | 51.62 |
| TraesCS5B01G164900.2 | Wheat | cytosol | 17.63 | 51.44 |
| Zm00001d019890_P001 | Maize | nucleus | 16.95 | 51.31 |
| Zm00001d005107_P001 | Maize | cytosol | 16.88 | 51.12 |
| Os09t0248300-01 | Rice | cytosol | 16.88 | 50.37 |
| GSMUA_Achr3P16830_001 | Banana | endoplasmic reticulum, golgi | 18.18 | 50.0 |
| Os09t0248200-01 | Rice | cytosol | 16.64 | 49.36 |
| CDY55572 | Canola | nucleus | 6.18 | 27.93 |
| CDY46317 | Canola | cytosol, nucleus, plastid | 8.97 | 27.62 |
| CDY34252 | Canola | cytosol, nucleus, plastid | 8.78 | 27.2 |
| CDY67951 | Canola | cytosol | 7.73 | 27.11 |
| CDX69452 | Canola | cytosol | 7.54 | 27.05 |
| CDY12290 | Canola | cytosol | 7.36 | 26.74 |
| CDY38318 | Canola | nucleus | 7.98 | 24.29 |
| CDY67200 | Canola | cytosol, nucleus | 2.1 | 24.29 |
| CDY19713 | Canola | cytosol | 4.27 | 22.7 |
| CDX99994 | Canola | peroxisome | 4.27 | 20.66 |
| CDY05835 | Canola | cytosol, nucleus, plastid | 4.51 | 20.33 |
| CDY38847 | Canola | nucleus, plastid | 6.37 | 17.28 |
| CDY32645 | Canola | nucleus | 6.18 | 17.15 |
| CDX71688 | Canola | nucleus | 5.88 | 16.24 |
| CDX86173 | Canola | cytosol | 6.56 | 12.27 |
| CDX80668 | Canola | cytosol, mitochondrion, plasma membrane | 6.68 | 12.11 |
| CDX99996 | Canola | extracellular | 0.93 | 9.32 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 1.98 | 6.68 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 1.98 | 6.68 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.6.5.1.5 | GO:A0A078D824 | EnsemblPlants:CDX85335 | ProteinID:CDX85335 | ProteinID:CDX85335.1 |
| ncoils:Coil | InterPro:Frigida | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051321 | EnsemblPlantsGene:GSBRNA2T00143004001 | InterPro:IPR011990 |
| InterPro:IPR019734 | PFAM:PF07899 | PFAM:PF08631 | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF8 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:Spo22/ZIP4/TEX11 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EE2EA9 | SEG:seg |
Description
BnaC07g26460D
Coordinates
chrLK031841:+:1272111..1279140
Molecular Weight (calculated)
179433.0 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.207
Length
1617 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKITHRET LHFRSSHRAE WCRKSHHTHT TQPITCLDLI LLKKKKKTKE ESVCYKSLCF CLSSTFLFPS SQPLGIFCTF LFSLSPTLII FDGSTIFRCF
0101: LNISDLFLRH LILQFLSLDL FKFAMEDTRS VASLMDSTSS KIQQLQKAFA ELESQRAVTL NLKWKEIEEH FHGLERSLKR RFHELEDQEK EYETKTRKAQ
0201: ELLEKKKAAV EAKEKVSLER LQKKRDAAVF AINSALVKYN NPPPITITSA EDSPNNAFVA DGTDENPDGT VQEAEISPEV KAYPQLLKLC GDMDSAGLHK
0301: FVSDNRKNLA SLKEEIPAAF KAAANPASLV LDSLEGFYPV EAPNGDGKKD GNLLGMRRTC IMLMECLSVL LSGLDGNSLG AVLSESVKQR AKSIAEGWSP
0401: LLGSLEMDAC NGNSLEAHAF LQLLATFGIV SGFEEDGILK LIPMVSRRRQ AAALCRSLGL SEKMPGVIEV LMNSGKQIDA VNLAFAFELT EQFPPVELLK
0501: SYLTEAKRSS SQGGPGNASP AVQDEFNERE LTGLKAVAKC VEEHNLEEQY PVEPLQKRIL QLEKAKAEKK RATEPTKPQT KRPRGAQPRV PDNHNHNNNN
0601: NNKTGYGRVI PERYPQYVYD NRPFLSGPIM AAQAPPPPPP QTYTFSPAAA AHGNFYGNCY QYQAPPPPSL TPPLLLVYES EMRIAEISTP DYRQLHRETE
0701: SNTHHPLLSE IELLIQQSES ISKDQPLPQI LPHSLRQSLT RLSQLAPFPG NSFKLTIWKL SFRLWNACVD LSNAASLQSS SSSAESIANL RHAAADMLFL
0801: ARDVTGVPSP TIKSSLIYYR TGLVWHDLKK FDLASDCFER ATEILSKIDI AKITDAGERK LILDLNLARS RTAWEISDRT LAVTLLNRAK NMLFGSPDHY
0901: KALSNQFLAF GKSALSREDD DCSLNDALRL MNESLDLCEK GLGTAKNRED TMEFKSMRIN TLRFISAVHL QKGEFESVIK CVKVLRSDGA DQHASLPVLA
1001: MKAWLGLGKH SEAEKELRGM VGNKDIPEAV WVSAVEAYFE VVGTAGAETA KGVFLGLLGR CHVSAKTALR VAHRVLGESR GGDCGSRIRA NVVAQLVSDE
1101: RVVALFAGEA VTNERKAIHS VLWNSASAHF GAKDFETSAE MFEKSMLYIP HNIENRVFRA KGFRVLCLCY LGLSQLDRAH EYIEEAEKLE PNIHCSFLKF
1201: KICLQRKEHS SAISQIDAML SCLDFSPHYL SLAAHEAISC QALSVAVASL SKFLSFYISG KTMPTTEVVV FRTLVSLLTQ DAGSETEALN FMLQAHSRAS
1301: KLGTECFFGS GETGKRELKW FALTSWNLGS RCGNAKKYEL CGEFCRLASD FYSYLDTGES GENSVMILRS LVLGVTAIIA LEKQNKNTLT ETQVKLAAEL
1401: LVRAGKIMAS LLSDGKDCIM EPELIFMYTL TAYEIHGRLN NSAFQLLVVK TFAGSKSCNY NYLLQLGIFA SQSPRSNPDV STFALNECLS ALIASASPEY
1501: PTIALIIRKL IALSSVHKGD TEDGEAIQKM YKQAYRIMVG LKEGEYPTDE GKWLAMTAWN RAALPVRLGQ LETARKWLSI GLEIAEKVSG MDTYRACMED
1601: FLGGFQTKVS SEAADMI
0101: LNISDLFLRH LILQFLSLDL FKFAMEDTRS VASLMDSTSS KIQQLQKAFA ELESQRAVTL NLKWKEIEEH FHGLERSLKR RFHELEDQEK EYETKTRKAQ
0201: ELLEKKKAAV EAKEKVSLER LQKKRDAAVF AINSALVKYN NPPPITITSA EDSPNNAFVA DGTDENPDGT VQEAEISPEV KAYPQLLKLC GDMDSAGLHK
0301: FVSDNRKNLA SLKEEIPAAF KAAANPASLV LDSLEGFYPV EAPNGDGKKD GNLLGMRRTC IMLMECLSVL LSGLDGNSLG AVLSESVKQR AKSIAEGWSP
0401: LLGSLEMDAC NGNSLEAHAF LQLLATFGIV SGFEEDGILK LIPMVSRRRQ AAALCRSLGL SEKMPGVIEV LMNSGKQIDA VNLAFAFELT EQFPPVELLK
0501: SYLTEAKRSS SQGGPGNASP AVQDEFNERE LTGLKAVAKC VEEHNLEEQY PVEPLQKRIL QLEKAKAEKK RATEPTKPQT KRPRGAQPRV PDNHNHNNNN
0601: NNKTGYGRVI PERYPQYVYD NRPFLSGPIM AAQAPPPPPP QTYTFSPAAA AHGNFYGNCY QYQAPPPPSL TPPLLLVYES EMRIAEISTP DYRQLHRETE
0701: SNTHHPLLSE IELLIQQSES ISKDQPLPQI LPHSLRQSLT RLSQLAPFPG NSFKLTIWKL SFRLWNACVD LSNAASLQSS SSSAESIANL RHAAADMLFL
0801: ARDVTGVPSP TIKSSLIYYR TGLVWHDLKK FDLASDCFER ATEILSKIDI AKITDAGERK LILDLNLARS RTAWEISDRT LAVTLLNRAK NMLFGSPDHY
0901: KALSNQFLAF GKSALSREDD DCSLNDALRL MNESLDLCEK GLGTAKNRED TMEFKSMRIN TLRFISAVHL QKGEFESVIK CVKVLRSDGA DQHASLPVLA
1001: MKAWLGLGKH SEAEKELRGM VGNKDIPEAV WVSAVEAYFE VVGTAGAETA KGVFLGLLGR CHVSAKTALR VAHRVLGESR GGDCGSRIRA NVVAQLVSDE
1101: RVVALFAGEA VTNERKAIHS VLWNSASAHF GAKDFETSAE MFEKSMLYIP HNIENRVFRA KGFRVLCLCY LGLSQLDRAH EYIEEAEKLE PNIHCSFLKF
1201: KICLQRKEHS SAISQIDAML SCLDFSPHYL SLAAHEAISC QALSVAVASL SKFLSFYISG KTMPTTEVVV FRTLVSLLTQ DAGSETEALN FMLQAHSRAS
1301: KLGTECFFGS GETGKRELKW FALTSWNLGS RCGNAKKYEL CGEFCRLASD FYSYLDTGES GENSVMILRS LVLGVTAIIA LEKQNKNTLT ETQVKLAAEL
1401: LVRAGKIMAS LLSDGKDCIM EPELIFMYTL TAYEIHGRLN NSAFQLLVVK TFAGSKSCNY NYLLQLGIFA SQSPRSNPDV STFALNECLS ALIASASPEY
1501: PTIALIIRKL IALSSVHKGD TEDGEAIQKM YKQAYRIMVG LKEGEYPTDE GKWLAMTAWN RAALPVRLGQ LETARKWLSI GLEIAEKVSG MDTYRACMED
1601: FLGGFQTKVS SEAADMI
001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
Arabidopsis Description
ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.