Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67951 | Canola | cytosol | 88.76 | 85.68 |
| AT1G31814.1 | Thale cress | cytosol | 70.11 | 65.96 |
| CDY55572 | Canola | nucleus | 40.67 | 50.56 |
| CDX69452 | Canola | cytosol | 51.01 | 50.33 |
| CDY67200 | Canola | cytosol, nucleus | 15.51 | 49.29 |
| KRH73863 | Soybean | nucleus | 32.81 | 28.13 |
| KRG98570 | Soybean | cytosol, nucleus, plastid | 33.48 | 27.14 |
| VIT_19s0090g01700.t01 | Wine grape | cytosol | 23.37 | 27.01 |
| CDY00062 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.81 | 26.76 |
| KRH46301 | Soybean | cytosol | 32.58 | 26.56 |
| CDY19713 | Canola | cytosol | 15.96 | 23.36 |
| CDY00066 | Canola | cytosol | 27.87 | 23.22 |
| CDY05684 | Canola | cytosol | 26.29 | 22.63 |
| CDX99994 | Canola | peroxisome | 16.85 | 22.46 |
| CDY48750 | Canola | cytosol | 26.29 | 22.2 |
| CDY46317 | Canola | cytosol, nucleus, plastid | 22.7 | 19.24 |
| CDY05835 | Canola | cytosol, nucleus, plastid | 15.28 | 18.94 |
| CDY34252 | Canola | cytosol, nucleus, plastid | 22.02 | 18.77 |
| CDY38318 | Canola | nucleus | 18.88 | 15.82 |
| CDX71688 | Canola | nucleus | 20.45 | 15.56 |
| CDY32645 | Canola | nucleus | 19.55 | 14.92 |
| CDX99996 | Canola | extracellular | 5.39 | 14.91 |
| CDY38847 | Canola | nucleus, plastid | 19.78 | 14.77 |
| CDX86173 | Canola | cytosol | 21.8 | 11.23 |
| CDX80668 | Canola | cytosol, mitochondrion, plasma membrane | 22.02 | 10.99 |
| CDX86307 | Canola | nucleus | 26.97 | 8.04 |
| CDX85335 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 26.74 | 7.36 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 6.07 | 5.64 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 5.84 | 5.43 |
| PGSC0003DMT400036725 | Potato | nucleus | 2.25 | 3.68 |
Protein Annotations
| EnsemblPlants:CDY12290 | EnsemblPlantsGene:GSBRNA2T00061359001 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida | ncoils:Coil | PANTHER:PTHR31791 |
| PANTHER:PTHR31791:SF13 | PFAM:PF07899 | ProteinID:CDY12290 | ProteinID:CDY12290.1 | SEG:seg | UniParc:UPI0004EEAC91 |
| UniProt:A0A078FD38 | MapMan:35.1 | : | : | : | : |
Description
BnaA09g24900DFRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD38]
Coordinates
chrLK032019:+:454940..456495
Molecular Weight (calculated)
49710.7 Da
IEP (calculated)
8.545
GRAVY (calculated)
-0.279
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAPESIALA IKQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSDIDSHF SSLSDRFRLL QSDKTEPPPA VTTETPLLWP ELRTFCENMD GKGLGTFMVD
101: NSNKRLSIKP ELAQAIRSSS SPAALVLDAI EGSYHCSPSS SADARRIFVL LLEALIEVKP NLTFELRERA RTLASDWRLN IGNKPSEALG FLHLVVVFEL
201: VSVFKMEEIL DYVFLISNCK QATTLSKKLG LDYTIVAGIV HKLLHTGRLL AAISFIYEFE MTDRFRPVNV LKTSLYNSRE AAKRVCAQAG NSLKAQNEAT
301: DKELSALRLV IKVIKERNLE IEFFEEDLEE SVQELENLRA RTTQAAKLAS PANPPKRPRA AMGNNLTAPT QSQQPPLLPD PRHGLQVNPF GFVNSTVPRV
401: NVPYGNQLAP YGSVPAPAIA ARPVYYEQQT GYGLRPQYQP PYYPQ
101: NSNKRLSIKP ELAQAIRSSS SPAALVLDAI EGSYHCSPSS SADARRIFVL LLEALIEVKP NLTFELRERA RTLASDWRLN IGNKPSEALG FLHLVVVFEL
201: VSVFKMEEIL DYVFLISNCK QATTLSKKLG LDYTIVAGIV HKLLHTGRLL AAISFIYEFE MTDRFRPVNV LKTSLYNSRE AAKRVCAQAG NSLKAQNEAT
301: DKELSALRLV IKVIKERNLE IEFFEEDLEE SVQELENLRA RTTQAAKLAS PANPPKRPRA AMGNNLTAPT QSQQPPLLPD PRHGLQVNPF GFVNSTVPRV
401: NVPYGNQLAP YGSVPAPAIA ARPVYYEQQT GYGLRPQYQP PYYPQ
001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
Arabidopsis Description
FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.