Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86173 | Canola | cytosol | 88.12 | 90.97 |
| CDX99994 | Canola | peroxisome | 23.88 | 63.77 |
| CDY19713 | Canola | cytosol | 21.19 | 62.17 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 32.74 | 60.96 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 32.51 | 60.54 |
| AT5G27230.1 | Thale cress | nucleus | 63.23 | 59.49 |
| CDX99996 | Canola | extracellular | 8.52 | 47.2 |
| CDY55572 | Canola | nucleus | 9.08 | 22.63 |
| CDY12290 | Canola | cytosol | 10.99 | 22.02 |
| CDY67951 | Canola | cytosol | 10.99 | 21.26 |
| CDY48750 | Canola | cytosol | 12.33 | 20.87 |
| CDX69452 | Canola | cytosol | 10.54 | 20.84 |
| CDY05684 | Canola | cytosol | 12.0 | 20.7 |
| CDY00066 | Canola | cytosol | 12.33 | 20.6 |
| GSMUA_Achr9P09220_001 | Banana | nucleus | 9.08 | 20.45 |
| CDY46317 | Canola | cytosol, nucleus, plastid | 10.87 | 18.48 |
| CDY34252 | Canola | cytosol, nucleus, plastid | 10.65 | 18.2 |
| CDY00062 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.26 | 17.84 |
| TraesCS4D01G265900.1 | Wheat | nucleus | 9.87 | 17.67 |
| TraesCS4B01G266000.1 | Wheat | cytosol, nucleus, plasma membrane | 9.75 | 17.47 |
| TraesCS4A01G039500.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 9.98 | 17.38 |
| GSMUA_Achr6P24860_001 | Banana | nucleus | 9.3 | 17.11 |
| Os03t0193225-01 | Rice | plasma membrane | 9.64 | 16.73 |
| CDY05835 | Canola | cytosol, nucleus, plastid | 6.61 | 16.43 |
| VIT_14s0030g00690.t01 | Wine grape | extracellular, golgi | 7.96 | 16.25 |
| HORVU4Hr1G071420.1 | Barley | cytosol, plastid | 8.86 | 15.9 |
| CDY67200 | Canola | cytosol, nucleus | 2.47 | 15.71 |
| CDY38318 | Canola | nucleus | 9.3 | 15.63 |
| CDY32645 | Canola | nucleus | 10.2 | 15.61 |
| EER92706 | Sorghum | plastid | 8.97 | 15.59 |
| Zm00001d028173_P002 | Maize | plastid | 8.52 | 14.84 |
| CDY38847 | Canola | nucleus, plastid | 9.87 | 14.77 |
| CDX71688 | Canola | nucleus | 8.97 | 13.68 |
| CDX86307 | Canola | nucleus | 11.88 | 7.1 |
| CDX85335 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 12.11 | 6.68 |
Protein Annotations
| EnsemblPlants:CDX80668 | EnsemblPlantsGene:GSBRNA2T00133817001 | InterPro:Frigida | ncoils:Coil | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF16 |
| PFAM:PF07899 | ProteinID:CDX80668 | ProteinID:CDX80668.1 | SEG:seg | UniParc:UPI0004EEA6E8 | MapMan:35.1 |
Description
BnaC07g27760D
Coordinates
chrLK031821:-:1993169..1996437
Molecular Weight (calculated)
99585.4 Da
IEP (calculated)
7.159
GRAVY (calculated)
-0.444
Length
892 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLMEKTMS GLRLLDLSKR NFKRTLDSLE ENARSLILLS IQWKEIEGFC DSTKAVLEER AKELEAMEES LKVRALELEA KEKEVEAKAS DLEKKDEALG
101: LEEMEKRKEE FEVFTRRIES VEKVSDEKVK ELEEKAKELD LKVRELQQKQ RGGVTTVRSE FEPLVSLLAK SIGTNVSMPT NCSTFHLSGD DLVKRNERLA
201: RTIPCLDPAK LVLDAVEGCF KEGFGEGDDR RGSVVDSCIL LLEKLMEMKV CVTREVKQEA TQLGIDWINK AIITDPKNDS LVLGCLVFLA AYGLDFVTTP
301: EVLLDLSESF LLYEQAPKLF RRLGLEDNVS DVVETLKMKD EYVATLRFIC EFRLSKLCPG WRPRTVLHEF LQSLTRVAGV TDGTGNLLEA EKAKREKRKA
401: DAAMALDCIR EKKAESLFNA NALKELSLLA KKDSAPRATE PVHKSCEKGQ NTANAVEKSK AVSVIPCEQK NEAKRQRLTE PITPCQNSTV NQLNVVSPPC
501: GEKIEELVVH HQPDAKATSP LSTETEPNIL SGSTNAETLR KLLEKQPPKE SDISNAIRCS PDPAKLVLET SMALCPKTPE GGYDFKLLVT SDICLILLDQ
601: LKKLPLQIEH PVKDDAKKLA VHWKDEISKS KTDELEVVCF LKFVGIFGIV SEFKANDLLA LLDTSYWQTV SPDLCQFLGL DSAIPGFIQN LIKSGYRLKA
701: VDYIYSFGMV HRFHPVSAII NDSMRITKES AEKSYRDAKN ESAPQVAAIE RQIKTLRAAI KCISCHKLES EFQLGDLEAQ IKSLLKRRRN LLAGHGSGSN
801: PNSTVKQSQP NSAEVGSVTS NTPSEPSTTA ASSSVTRPGS RSNMKRGQKR SFSENKQSSG RVTSTPRNDF HGNEGQSYPV DHHHSKRFHR NF
101: LEEMEKRKEE FEVFTRRIES VEKVSDEKVK ELEEKAKELD LKVRELQQKQ RGGVTTVRSE FEPLVSLLAK SIGTNVSMPT NCSTFHLSGD DLVKRNERLA
201: RTIPCLDPAK LVLDAVEGCF KEGFGEGDDR RGSVVDSCIL LLEKLMEMKV CVTREVKQEA TQLGIDWINK AIITDPKNDS LVLGCLVFLA AYGLDFVTTP
301: EVLLDLSESF LLYEQAPKLF RRLGLEDNVS DVVETLKMKD EYVATLRFIC EFRLSKLCPG WRPRTVLHEF LQSLTRVAGV TDGTGNLLEA EKAKREKRKA
401: DAAMALDCIR EKKAESLFNA NALKELSLLA KKDSAPRATE PVHKSCEKGQ NTANAVEKSK AVSVIPCEQK NEAKRQRLTE PITPCQNSTV NQLNVVSPPC
501: GEKIEELVVH HQPDAKATSP LSTETEPNIL SGSTNAETLR KLLEKQPPKE SDISNAIRCS PDPAKLVLET SMALCPKTPE GGYDFKLLVT SDICLILLDQ
601: LKKLPLQIEH PVKDDAKKLA VHWKDEISKS KTDELEVVCF LKFVGIFGIV SEFKANDLLA LLDTSYWQTV SPDLCQFLGL DSAIPGFIQN LIKSGYRLKA
701: VDYIYSFGMV HRFHPVSAII NDSMRITKES AEKSYRDAKN ESAPQVAAIE RQIKTLRAAI KCISCHKLES EFQLGDLEAQ IKSLLKRRRN LLAGHGSGSN
801: PNSTVKQSQP NSAEVGSVTS NTPSEPSTTA ASSSVTRPGS RSNMKRGQKR SFSENKQSSG RVTSTPRNDF HGNEGQSYPV DHHHSKRFHR NF
001: MEKVTSGLEL VDISKRNFRK TLESLQEGAH SLLLLTIQWK EIESYFDSTR SVLEERAKEL EALEESIKVK ALELEKKEKE LCLIDESMKA KQSEFEKKEK
101: DFDLEQKAEV EKRKREVEQL EKFTTRMESV ERVSDEKLME LGLRATELEL KMEEVEKHRE RIVAGDKLRG EFEPLVSLLA KNMGLSVTMP VKCSTLYLNE
201: NADEMVKKNT ALARMVPYLD PAKVVLDAIE GSFKEYWKKD LGEADDRVVN SWIVLLENLI KMNLKITPQV KQEATPLGIA WLGKAKANMK NDPPQVFGCA
301: LFLAAYGLGS LTTHGVLLTL VERFLLYDHA PKLFRLLGLE EKVSGAVETL KKKEEYLATL KFICEFRLYK LCPGGRPGEL LIEFFDSSDK AARVIAGTGT
401: SMEAQKARRE KKKADAAMAI KYIKEAKAET MFPAKILKRL AVVKNDESAQ RAMEPVQKSY EKRQSTTKGV EKSEAKSSIP YEQKHVIKRP RLTEPTAPSQ
501: NLTVKQPEVV CVPTGKQVKE SGADHQPDTI ATHPSGTETK LNILSGSIKA DMLRELVEKQ PLKESEDLSN ALKCTPDPAK LFLDTSMALC PTNTEGGYEF
601: KMLITSASCS LLLNQLKKLL PKIGHPVKGD AKKLAVYWKD KIAKSKRDQL EVICFLQFLG IFGIVSEFKA DDLLGLLDNS YWQTVSPDLC QFLGLDDAIP
701: GFIQNLIKTG HRIKAIDYIY SFGMVHRFQP VSAIINDSLR ITKESAEKSY REAKNESTTQ VAAIDRQVRA LRAAIKCISC HKLESEFQLG DLEEQIKSLL
801: KLRRNTSNGS GSGSASSKPD STIKQSQTAK PPTVAEVAPV TSNIPLEPST EAASSSASKP FSKKNKRGKK RSMSGNNQSS GHIASHTSNH YPSHDYSLNQ
901: RLTWPVDNYD RGFTGFPNPD YNNNQWGQPE GPQFYHLYQP LDPRYRNY
101: DFDLEQKAEV EKRKREVEQL EKFTTRMESV ERVSDEKLME LGLRATELEL KMEEVEKHRE RIVAGDKLRG EFEPLVSLLA KNMGLSVTMP VKCSTLYLNE
201: NADEMVKKNT ALARMVPYLD PAKVVLDAIE GSFKEYWKKD LGEADDRVVN SWIVLLENLI KMNLKITPQV KQEATPLGIA WLGKAKANMK NDPPQVFGCA
301: LFLAAYGLGS LTTHGVLLTL VERFLLYDHA PKLFRLLGLE EKVSGAVETL KKKEEYLATL KFICEFRLYK LCPGGRPGEL LIEFFDSSDK AARVIAGTGT
401: SMEAQKARRE KKKADAAMAI KYIKEAKAET MFPAKILKRL AVVKNDESAQ RAMEPVQKSY EKRQSTTKGV EKSEAKSSIP YEQKHVIKRP RLTEPTAPSQ
501: NLTVKQPEVV CVPTGKQVKE SGADHQPDTI ATHPSGTETK LNILSGSIKA DMLRELVEKQ PLKESEDLSN ALKCTPDPAK LFLDTSMALC PTNTEGGYEF
601: KMLITSASCS LLLNQLKKLL PKIGHPVKGD AKKLAVYWKD KIAKSKRDQL EVICFLQFLG IFGIVSEFKA DDLLGLLDNS YWQTVSPDLC QFLGLDDAIP
701: GFIQNLIKTG HRIKAIDYIY SFGMVHRFQP VSAIINDSLR ITKESAEKSY REAKNESTTQ VAAIDRQVRA LRAAIKCISC HKLESEFQLG DLEEQIKSLL
801: KLRRNTSNGS GSGSASSKPD STIKQSQTAK PPTVAEVAPV TSNIPLEPST EAASSSASKP FSKKNKRGKK RSMSGNNQSS GHIASHTSNH YPSHDYSLNQ
901: RLTWPVDNYD RGFTGFPNPD YNNNQWGQPE GPQFYHLYQP LDPRYRNY
Arabidopsis Description
FRL5FRIGIDA-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XV31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.