Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G265900.1 | Wheat | nucleus | 91.35 | 91.16 |
| TraesCS4B01G266000.1 | Wheat | cytosol, nucleus, plasma membrane | 90.54 | 90.36 |
| TraesCS4A01G039500.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 85.92 | 83.4 |
| Os03t0193225-01 | Rice | plasma membrane | 66.0 | 63.81 |
| EER92706 | Sorghum | plastid | 64.79 | 62.77 |
| Zm00001d028173_P002 | Maize | plastid | 63.78 | 61.91 |
| GSMUA_Achr9P09220_001 | Banana | nucleus | 20.93 | 26.26 |
| GSMUA_Achr6P24860_001 | Banana | nucleus | 24.14 | 24.74 |
| KRH73863 | Soybean | nucleus | 22.13 | 21.19 |
| CDY19713 | Canola | cytosol | 12.68 | 20.72 |
| CDX99994 | Canola | peroxisome | 13.28 | 19.76 |
| HORVU5Hr1G104870.1 | Barley | cytosol | 21.93 | 19.64 |
| KRG98570 | Soybean | cytosol, nucleus, plastid | 20.72 | 18.76 |
| KRH46301 | Soybean | cytosol | 20.32 | 18.5 |
| HORVU5Hr1G051330.1 | Barley | cytosol | 19.11 | 17.63 |
| CDX99996 | Canola | extracellular | 5.63 | 17.39 |
| VIT_14s0030g00690.t01 | Wine grape | extracellular, golgi | 15.09 | 17.16 |
| HORVU1Hr1G088810.2 | Barley | nucleus | 21.13 | 16.85 |
| HORVU3Hr1G033190.1 | Barley | nucleus | 2.82 | 13.21 |
| HORVU5Hr1G122680.1 | Barley | mitochondrion, peroxisome, plastid | 14.08 | 13.16 |
| HORVU3Hr1G021380.1 | Barley | nucleus | 8.45 | 10.63 |
| Bra009973.1-P | Field mustard | cytosol | 17.91 | 10.24 |
| CDX86173 | Canola | cytosol | 17.3 | 9.95 |
| Bra036105.1-P | Field mustard | nucleus | 16.7 | 9.95 |
| AT5G27230.1 | Thale cress | nucleus | 18.51 | 9.7 |
| HORVU0Hr1G036250.1 | Barley | cytosol | 3.82 | 9.09 |
| HORVU3Hr1G033120.2 | Barley | nucleus | 4.83 | 8.89 |
| CDX80668 | Canola | cytosol, mitochondrion, plasma membrane | 15.9 | 8.86 |
| HORVU3Hr1G033180.1 | Barley | cytosol, nucleus | 2.82 | 8.59 |
| PGSC0003DMT400036725 | Potato | nucleus | 3.82 | 6.99 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 2.41 | 2.51 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 2.21 | 2.3 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G071420.1 | EnsemblPlantsGene:HORVU4Hr1G071420 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF5 |
| PFAM:PF07899 | SEG:seg | UniParc:UPI000B487EC9 | UniProt:A0A287PKT1 | MapMan:35.1 | : |
Description
FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287PKT1]
Coordinates
chrchr4H:-:580566011..580574138
Molecular Weight (calculated)
53278.8 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.122
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAERQANPS VLDAVASLQT YSTALSAFTS AWRSLYSDAT TIDSTLASRL EGFSQLELLC SAMDGPGLRA YLSEHRDELR EPARALDAAL LVAPDPGLLV
101: LAAAAGFCRA PPDNGKADAE SKVSCRLLID LLDRIRALGV KPSPEALEEA RAVAADWRRS KRIEAQSLFK NEAIAFLLLI GVFGLVEDVG GAVQVLDLVV
201: SISSRERAVE IFLGLGLDLD KHLPVLTQAM ISKGKQLDAV KFIQALNLVH KYPLLPILRS YVNDAKNAGN MIRIRGGGPA SQDAGDAKER TLLGALQKFI
301: KEHNLEELPI SEEANNRMTQ LDLQSAERKR AANAAAAAAR EVSKNILDFR KRPQLAENAV QGSLGQNIRP VGTLGQQLML RQNIPAVGVA NKYQAVSSHS
401: VLPAIAHNPL LPAGNQRPTG IQTQTLAASS VQAQYSGVAD FYNLASIRPG GLSVPGGSTS SRSKLYSEDP LVYVSRASDK KGSSYSYSLS NMSKYNP
101: LAAAAGFCRA PPDNGKADAE SKVSCRLLID LLDRIRALGV KPSPEALEEA RAVAADWRRS KRIEAQSLFK NEAIAFLLLI GVFGLVEDVG GAVQVLDLVV
201: SISSRERAVE IFLGLGLDLD KHLPVLTQAM ISKGKQLDAV KFIQALNLVH KYPLLPILRS YVNDAKNAGN MIRIRGGGPA SQDAGDAKER TLLGALQKFI
301: KEHNLEELPI SEEANNRMTQ LDLQSAERKR AANAAAAAAR EVSKNILDFR KRPQLAENAV QGSLGQNIRP VGTLGQQLML RQNIPAVGVA NKYQAVSSHS
401: VLPAIAHNPL LPAGNQRPTG IQTQTLAASS VQAQYSGVAD FYNLASIRPG GLSVPGGSTS SRSKLYSEDP LVYVSRASDK KGSSYSYSLS NMSKYNP
001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
Arabidopsis Description
FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.