Factsheet for HORVU0Hr1G036250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G033180.1	Barley	cytosol, nucleus	59.81	76.69
HORVU3Hr1G033120.2	Barley	nucleus	82.78	64.07
HORVU3Hr1G021380.1	Barley	nucleus	83.73	44.3
TraesCS3B01G136400.1	Wheat	cytosol, nucleus, plastid	78.47	24.92
TraesCS3D01G119200.1	Wheat	cytosol, nucleus, plastid	78.47	24.89
TraesCS3A01G117300.1	Wheat	cytosol, nucleus, plastid	77.51	24.77
Os01t0181000-00	Rice	nucleus	46.89	16.47
KXG31679	Sorghum	nucleus	46.89	15.48
Zm00001d039594_P001	Maize	extracellular, plasma membrane	44.02	14.4
GSMUA_Achr10P...	Banana	nucleus	22.01	8.86
VIT_11s0016g04070.t01	Wine grape	nucleus	20.1	7.88
PGSC0003DMT400047832	Potato	nucleus	18.66	7.33
KRH60292	Soybean	nucleus	17.7	7.12
KRH41582	Soybean	nucleus	16.27	6.54
HORVU5Hr1G104870.1	Barley	cytosol	16.75	6.31
HORVU5Hr1G051330.1	Barley	cytosol	14.83	5.75
HORVU1Hr1G088810.2	Barley	nucleus	16.27	5.46
HORVU5Hr1G122680.1	Barley	mitochondrion, peroxisome, plastid	10.53	4.14
HORVU4Hr1G071420.1	Barley	cytosol, plastid	9.09	3.82
HORVU3Hr1G033190.1	Barley	nucleus	1.91	3.77
Solyc11g071340.1.1	Tomato	nucleus	7.66	3.34

Protein Annotations

EnsemblPlants:HORVU0Hr1G036250.1	EnsemblPlantsGene:HORVU0Hr1G036250	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	InterPro:Frigida	ncoils:Coil	PANTHER:PTHR31791
PANTHER:PTHR31791:SF10	PFAM:PF07899	SEG:seg	UniParc:UPI000B485D75	UniProt:A0A287EBP6	MapMan:35.2

Description

FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287EBP6]

Coordinates

chrchrUn:+:223114253..223122073

Molecular Weight (calculated)

20321.6 Da

IEP (calculated)

4.037

GRAVY (calculated)

-0.455

Length

209 amino acids

Sequence
(BLAST)

001: MQXXXXXXXX XXXXXXXXXX XXXXXXXEAE EEGDPEELVA ASGDEEEENP EEVDNETQED PEEAGMEALK EKKGEEVKVV VPADEKIAEE AGKSEVKEES
101: KATGEVVKEG ENGALWQAEA HLFLQMVAAF GLKDKFDGEF LKSLFVANRR RKELARFAYV LGFEETVADV VQELLTSGNV IEGIYIAHEA CLLERFPGTS
201: SSLLYKGLH

Best Arabidopsis Sequence Match ( AT3G22440.1 )
(BLAST)

001: MGSVPDPGEL TELAQPSFEE FQKQTSLMTS CTLLWQELSD HFTSLEQNLM KKSEALKQMI ETLDNQTQTS LESLKRREVT IDHSVEIVAG KVGERARAAL
101: ESLEKARDGC GDGSNDDSGD VDDEEGLLSA LKSLCLKMDA RGFWNFVTAR KKELENLRSK IPAALVDCVD PAMLVLEAIS EVFPVDTRGD KVSNDYGWAC
201: VVILESLTPV IVDPVIGKSR LLVTPSVKEK AKEIAETWKK SLEERGRIEN VKTPDVHTFL QHLVTFGIVK SEDLALYRKL VVGSAWRKQM PKLAVSVGLG
301: DQMPDMIEEL ISRGQQLDAV HFTYEVGLVD KFPPVPLLKA YLRDAKKSAA SIMEDSSNTG RATHLVARKE QSALKAVLKC IEEYKLEEEF PPENLKKRLD
401: QLEKTKTEKR KPAAVPANKR TRASYNGPMP PAKAGRITNA YVSSFPFIRS PSHSPQYASP AAYPSPPTTV YSNRSPPYPY SPEIIPGSYQ GSPIGYPAYN
501: GYCNGPVPAP APPVYHPHHH QHHQFHHQQH YY

Arabidopsis Description

FRL4AFRIGIDA-like protein 4a [Source:UniProtKB/Swiss-Prot;Acc:Q9LUV4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.