Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039594_P001 | Maize | extracellular, plasma membrane | 84.99 | 84.19 |
| Os01t0181000-00 | Rice | nucleus | 58.61 | 62.35 |
| TraesCS3A01G117300.1 | Wheat | cytosol, nucleus, plastid | 62.09 | 60.09 |
| TraesCS3D01G119200.1 | Wheat | cytosol, nucleus, plastid | 62.09 | 59.64 |
| TraesCS3B01G136400.1 | Wheat | cytosol, nucleus, plastid | 61.61 | 59.27 |
| HORVU3Hr1G021380.1 | Barley | nucleus | 33.02 | 52.91 |
| HORVU3Hr1G033120.2 | Barley | nucleus | 21.17 | 49.63 |
| HORVU0Hr1G036250.1 | Barley | cytosol | 15.48 | 46.89 |
| HORVU3Hr1G033180.1 | Barley | cytosol, nucleus | 11.53 | 44.79 |
| GSMUA_Achr10P... | Banana | nucleus | 29.23 | 35.65 |
| VIT_11s0016g04070.t01 | Wine grape | nucleus | 26.7 | 31.71 |
| KRH60292 | Soybean | nucleus | 23.7 | 28.85 |
| KRH41582 | Soybean | nucleus | 23.7 | 28.85 |
| PGSC0003DMT400047832 | Potato | nucleus | 22.12 | 26.32 |
| KXG34492 | Sorghum | nucleus | 25.28 | 25.89 |
| Solyc11g071340.1.1 | Tomato | nucleus | 19.43 | 25.68 |
| EES02294 | Sorghum | nucleus | 19.91 | 23.51 |
| EER99638 | Sorghum | cytosol | 18.01 | 18.48 |
| EER92706 | Sorghum | plastid | 13.74 | 16.96 |
| EER93089 | Sorghum | plastid | 11.85 | 16.23 |
Protein Annotations
| EnsemblPlants:KXG31679 | EnsemblPlantsGene:SORBI_3003G041300 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida | ncoils:Coil | PANTHER:PTHR31791 |
| PANTHER:PTHR31791:SF10 | PFAM:PF07899 | ProteinID:KXG31679 | ProteinID:KXG31679.2 | SEG:seg | UniParc:UPI0009DC88DE |
| UniProt:A0A1B6Q184 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:3850484..3854139
Molecular Weight (calculated)
68201.0 Da
IEP (calculated)
4.373
GRAVY (calculated)
-0.588
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTDDSAAV GEVRRLLAHL DSQQQILADC HGAWSRALAH FASLEEDLAS RSAALEEALA AADASTSESL AALEARESAV PARLSEASAA LSAAVAEAET
101: ESTGPPPSDI KGALRWICRR MDAAALWRFM AAHRRELAVV RKEAGPAVAM AVDPPRLVLD VVSDFLAAGS GVGEDQCWVL GMLLRSLLDS NDRKPPEIGD
201: TLVERAFAVT KEWQERFGIN MDKFSSEDKE VEMAEADGLG NSGATEKKEG KEEEEEGQEE EEEEEEEEEE EEEEEEVEEV EEEEEDPEKT SPVSGDEEDP
301: EEVEDPEALE KEGNEVKGEG AEGKVSEEGE GAEGKVSEEG ERAEKIGPEG EKKGAAVGTM EGKTGEGGNK GAPEQPEAQI FVQMVAAFGL KDKFDEEFLR
401: RLFVANGRKR ELARFACVLG FEESLRGIVE ELIKSGNVIE AIFVAHEADL LERFPPVPLL KSYLRNSTDK AQAVLKSGRH SSSALEEANN LEGNAYRSII
501: RCVESCQLQS VCPIEVMKKK LAKLEKDKSE RKKAAGPSRF QNKRSRGAAG PYPFPAAKAA RGSNFGPRFQ NPISRSLNYA AHAGYINPAA ASSYYVPGSV
601: SGRRGGVPFG GSGATYGGSP NFAAGGGQQS FRR
101: ESTGPPPSDI KGALRWICRR MDAAALWRFM AAHRRELAVV RKEAGPAVAM AVDPPRLVLD VVSDFLAAGS GVGEDQCWVL GMLLRSLLDS NDRKPPEIGD
201: TLVERAFAVT KEWQERFGIN MDKFSSEDKE VEMAEADGLG NSGATEKKEG KEEEEEGQEE EEEEEEEEEE EEEEEEVEEV EEEEEDPEKT SPVSGDEEDP
301: EEVEDPEALE KEGNEVKGEG AEGKVSEEGE GAEGKVSEEG ERAEKIGPEG EKKGAAVGTM EGKTGEGGNK GAPEQPEAQI FVQMVAAFGL KDKFDEEFLR
401: RLFVANGRKR ELARFACVLG FEESLRGIVE ELIKSGNVIE AIFVAHEADL LERFPPVPLL KSYLRNSTDK AQAVLKSGRH SSSALEEANN LEGNAYRSII
501: RCVESCQLQS VCPIEVMKKK LAKLEKDKSE RKKAAGPSRF QNKRSRGAAG PYPFPAAKAA RGSNFGPRFQ NPISRSLNYA AHAGYINPAA ASSYYVPGSV
601: SGRRGGVPFG GSGATYGGSP NFAAGGGQQS FRR
001: MGSVPDPGEL TELAQPSFEE FQKQTSLMTS CTLLWQELSD HFTSLEQNLM KKSEALKQMI ETLDNQTQTS LESLKRREVT IDHSVEIVAG KVGERARAAL
101: ESLEKARDGC GDGSNDDSGD VDDEEGLLSA LKSLCLKMDA RGFWNFVTAR KKELENLRSK IPAALVDCVD PAMLVLEAIS EVFPVDTRGD KVSNDYGWAC
201: VVILESLTPV IVDPVIGKSR LLVTPSVKEK AKEIAETWKK SLEERGRIEN VKTPDVHTFL QHLVTFGIVK SEDLALYRKL VVGSAWRKQM PKLAVSVGLG
301: DQMPDMIEEL ISRGQQLDAV HFTYEVGLVD KFPPVPLLKA YLRDAKKSAA SIMEDSSNTG RATHLVARKE QSALKAVLKC IEEYKLEEEF PPENLKKRLD
401: QLEKTKTEKR KPAAVPANKR TRASYNGPMP PAKAGRITNA YVSSFPFIRS PSHSPQYASP AAYPSPPTTV YSNRSPPYPY SPEIIPGSYQ GSPIGYPAYN
501: GYCNGPVPAP APPVYHPHHH QHHQFHHQQH YY
101: ESLEKARDGC GDGSNDDSGD VDDEEGLLSA LKSLCLKMDA RGFWNFVTAR KKELENLRSK IPAALVDCVD PAMLVLEAIS EVFPVDTRGD KVSNDYGWAC
201: VVILESLTPV IVDPVIGKSR LLVTPSVKEK AKEIAETWKK SLEERGRIEN VKTPDVHTFL QHLVTFGIVK SEDLALYRKL VVGSAWRKQM PKLAVSVGLG
301: DQMPDMIEEL ISRGQQLDAV HFTYEVGLVD KFPPVPLLKA YLRDAKKSAA SIMEDSSNTG RATHLVARKE QSALKAVLKC IEEYKLEEEF PPENLKKRLD
401: QLEKTKTEKR KPAAVPANKR TRASYNGPMP PAKAGRITNA YVSSFPFIRS PSHSPQYASP AAYPSPPTTV YSNRSPPYPY SPEIIPGSYQ GSPIGYPAYN
501: GYCNGPVPAP APPVYHPHHH QHHQFHHQQH YY
Arabidopsis Description
FRL4AFRIGIDA-like protein 4a [Source:UniProtKB/Swiss-Prot;Acc:Q9LUV4]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.