Factsheet for HORVU3Hr1G033180.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G036250.1	Barley	cytosol	76.69	59.81
HORVU3Hr1G033120.2	Barley	nucleus	77.3	46.67
HORVU3Hr1G021380.1	Barley	nucleus	77.3	31.9
TraesCS3D01G119200.1	Wheat	cytosol, nucleus, plastid	74.85	18.51
TraesCS3B01G136400.1	Wheat	cytosol, nucleus, plastid	74.23	18.39
TraesCS3A01G117300.1	Wheat	cytosol, nucleus, plastid	73.62	18.35
KXG31679	Sorghum	nucleus	44.79	11.53
Os01t0181000-00	Rice	nucleus	40.49	11.09
Zm00001d039594_P001	Maize	extracellular, plasma membrane	39.26	10.02
GSMUA_Achr10P...	Banana	nucleus	20.86	6.55
VIT_11s0016g04070.t01	Wine grape	nucleus	19.63	6.0
KRH60292	Soybean	nucleus	18.4	5.77
KRH41582	Soybean	nucleus	17.18	5.38
PGSC0003DMT400047832	Potato	nucleus	15.95	4.89
HORVU5Hr1G104870.1	Barley	cytosol	16.56	4.86
HORVU1Hr1G088810.2	Barley	nucleus	17.18	4.49
HORVU5Hr1G051330.1	Barley	cytosol	14.72	4.45
HORVU4Hr1G071420.1	Barley	cytosol, plastid	8.59	2.82
HORVU5Hr1G122680.1	Barley	mitochondrion, peroxisome, plastid	7.36	2.26
HORVU3Hr1G033190.1	Barley	nucleus	1.23	1.89
Solyc11g071340.1.1	Tomato	nucleus	3.07	1.04

Protein Annotations

EnsemblPlants:HORVU3Hr1G033180.1	EnsemblPlantsGene:HORVU3Hr1G033180	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	InterPro:Frigida	PANTHER:PTHR31791	PANTHER:PTHR31791:SF10
PFAM:PF07899	SEG:seg	UniParc:UPI000B468CA3	UniProt:A0A287KPG9	MapMan:35.2	:

Description

FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287KPG9]

Coordinates

chrchr3H:-:173231762..173232251

Molecular Weight (calculated)

18322.4 Da

IEP (calculated)

4.105

GRAVY (calculated)

-0.402

Length

163 amino acids

Sequence
(BLAST)

001: ENPEEVDNET QEDPEEAGME ALKEKKGEEV KVVVPADEKI AEEAGKSEVK EESKATGEVV KEGENGALWQ AEAHLFLQMV AAFGLKDKFD GEFLKSLFVA
101: NRRRKELARF AYVLGFEETV AGDDDLLTWF LNFLLLLSDL VTGLQFIEYE DCGHSSEFTL QIK

Best Arabidopsis Sequence Match ( AT5G48385.1 )
(BLAST)

001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH

Arabidopsis Description

FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.