CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028173_P002	Maize	plastid	90.45	90.62
TraesCS4D01G265900.1	Wheat	nucleus	63.35	65.26
TraesCS4B01G266000.1	Wheat	cytosol, nucleus, plasma membrane	63.16	65.06
HORVU4Hr1G071420.1	Barley	cytosol, plastid	62.77	64.79
Os03t0193225-01	Rice	plasma membrane	61.21	61.09
TraesCS4A01G039500.1	Wheat	cytosol, nucleus, plasma membrane, plastid	60.04	60.16
GSMUA_Achr9P09220_001	Banana	nucleus	21.64	28.03
GSMUA_Achr6P24860_001	Banana	nucleus	24.56	25.98
KRH73863	Soybean	nucleus	21.25	21.0
KRG98570	Soybean	cytosol, nucleus, plastid	20.27	18.94
KRH46301	Soybean	cytosol	19.69	18.5
CDY19713	Canola	cytosol	10.33	17.43
CDX99994	Canola	peroxisome	11.31	17.37
EES02294	Sorghum	nucleus	18.13	17.35
VIT_14s0030g00690.t01	Wine grape	extracellular, golgi	14.62	17.16
KXG34492	Sorghum	nucleus	20.27	16.83
EER93089	Sorghum	plastid	14.04	15.58
EER99638	Sorghum	cytosol	18.13	15.07
CDX99996	Canola	extracellular	4.68	14.91
KXG31679	Sorghum	nucleus	16.96	13.74
CDX86173	Canola	cytosol	16.37	9.72
Bra009973.1-P	Field mustard	cytosol	16.37	9.67
Bra036105.1-P	Field mustard	nucleus	14.81	9.11
AT5G27230.1	Thale cress	nucleus	16.76	9.07
CDX80668	Canola	cytosol, mitochondrion, plasma membrane	15.59	8.97
PGSC0003DMT400036725	Potato	nucleus	3.9	7.35
CDX99995	Canola	cytosol, nucleus, peroxisome	2.92	3.13
CDY19712	Canola	cytosol, nucleus, peroxisome	2.73	2.92

Protein Annotations

EnsemblPlants:EER92706	EnsemblPlantsGene:SORBI_3001G472100	EntrezGene:8081895	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	InterPro:Frigida	ncoils:Coil
PANTHER:PTHR31791	PANTHER:PTHR31791:SF5	PFAM:PF07899	ProteinID:EER92706	ProteinID:EER92706.1	RefSeq:XP_002465708.1
SEG:seg	unigene:Sbi.11966	UniParc:UPI0001A82956	UniProt:C5WUQ8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:+:74464664..74469142

Molecular Weight (calculated)

55236.2 Da

IEP (calculated)

9.768

GRAVY (calculated)

-0.227

Length

513 amino acids

Sequence
(BLAST)

001: MADATPSIPS AIASLQAYST ALSAFTAAWR AVETHASSLD STLAARLAGY TELELICSAM DGAGLLAYLT EHRDELKEPA RALDAALQVA PDPGLLVLSA
101: AATFCRTPPE KAKNDGSVKA SCRLLMALLD RLRAIGFKPS PEARDEARAV AADWKRGKRI GTEVMFKQET FAFLHLVGVF GLVEDVGGAG EVLDLVVSIS
201: GRERAVEAFL VLGLDLDQHM PILIQKMVNK SKQLEAVKFI QALNIVHKYP LLPIMRSYID HAAVAGKMIR IRGDDLATQN AADAKERTLL GTLQKFIKEQ
301: KLEELPIFEE ANKRMAHLDQ QSAERKRTAA AAAAAAQKVS KNIEEQQKKI QELMQPAKRP RPENVVQGSL GQNVNPARTS TQQFKPQHSI HKAGVSNQYQ
401: AALTQNVLPA INQISQLVAG SHRPVGIQNQ AIAVPPQYGS GSLASYYGVT STTPYRSSTL APGPGALNGP SAQASSRSKL YSGDPLAAVS RSSDKKGSSY
501: KYSLSSMSTY DHK

Best Arabidopsis Sequence Match ( AT1G31814.1 )
(BLAST)

001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ

Arabidopsis Description

FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.