Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022016_P001 | Maize | extracellular, plasma membrane | 90.28 | 89.41 |
| Os07t0592300-01 | Rice | nucleus | 74.23 | 75.33 |
| HORVU1Hr1G088810.2 | Barley | nucleus | 69.69 | 69.02 |
| TraesCS1B01G432600.1 | Wheat | nucleus | 68.72 | 67.09 |
| TraesCS1A01G403200.1 | Wheat | nucleus | 68.56 | 67.04 |
| TraesCS1D01G411200.1 | Wheat | nucleus | 68.23 | 66.83 |
| GSMUA_Achr5P16090_001 | Banana | nucleus | 46.52 | 47.2 |
| VIT_07s0129g00610.t01 | Wine grape | cytosol | 39.22 | 41.94 |
| KRH04492 | Soybean | nucleus | 34.85 | 38.88 |
| KRH58029 | Soybean | nucleus | 34.36 | 38.34 |
| Solyc04g008840.2.1 | Tomato | nucleus | 35.33 | 36.21 |
| PGSC0003DMT400065090 | Potato | nucleus | 35.33 | 35.86 |
| EES02294 | Sorghum | nucleus | 29.17 | 33.58 |
| KXG34492 | Sorghum | nucleus | 22.2 | 22.17 |
| EER92706 | Sorghum | plastid | 15.07 | 18.13 |
| KXG31679 | Sorghum | nucleus | 18.48 | 18.01 |
| EER93089 | Sorghum | plastid | 12.32 | 16.45 |
Protein Annotations
| EnsemblPlants:EER99638 | EnsemblPlantsGene:SORBI_3002G361400 | EntrezGene:8058388 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida | ncoils:Coil |
| PANTHER:PTHR31791 | PANTHER:PTHR31791:SF4 | PFAM:PF07899 | ProteinID:EER99638 | ProteinID:EER99638.1 | RefSeq:XP_002463117.1 |
| SEG:seg | unigene:Sbi.20730 | UniParc:UPI0001A83C99 | UniProt:C5XD59 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr2:-:72300819..72305524
Molecular Weight (calculated)
67016.1 Da
IEP (calculated)
7.709
GRAVY (calculated)
-0.553
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEATLNNS GGSESATPLL EQLAEVFGKL KSHTEASLQL QNGMQWEDIK GHFLSLDKSY RSKCDELVEK QKALEEKKAE ARRLIAEKET NVSTKERASL
101: NQLQELRDAA VSSLAEVRQK YKVELAEILD ASGSKDKKVS TSINDNNASR ASEENTPASG LGEASEASPV ETKPRPVLKQ LCEQMDTKGL LKFLSENSRK
201: LASLRDELSV ALKCATDPAR FVLNSLEGFF PPPEQTNSPG SKHNALEVQR KSCIVLMEAI APALGTTEPG GNDPWSSEIK EQAKAIAEEW KSKLAEVDLD
301: ASNGYSLEAQ AFLQLLTTFN VDSVLDEDEL CKIVVAVSRR KQTAVCCRSL GLNEKIPGII EELVKRHRQI DAVHFVQAFG LSEAFPPAPL LKTYVEELKD
401: TIENNVDATA TSLKDDPKSR ELLALRAVIK CIEEYKLQKE CSLGPLQKRV SELKPKGEKR PSTDAGRTYA KKPRGPGISF PRRPAGSVGS AARRPPFPGF
501: NWQRAPAPMP SHGPAPMPSR APLPDRYGAP DRYHHTPPAP VYEAGPFSSY GEPFSAPKPF QYTPGSVAAS YNSSPYKVAY GGPGAPAAST YAGYGGASGP
601: AGSSSYANYL VYRPPQP
101: NQLQELRDAA VSSLAEVRQK YKVELAEILD ASGSKDKKVS TSINDNNASR ASEENTPASG LGEASEASPV ETKPRPVLKQ LCEQMDTKGL LKFLSENSRK
201: LASLRDELSV ALKCATDPAR FVLNSLEGFF PPPEQTNSPG SKHNALEVQR KSCIVLMEAI APALGTTEPG GNDPWSSEIK EQAKAIAEEW KSKLAEVDLD
301: ASNGYSLEAQ AFLQLLTTFN VDSVLDEDEL CKIVVAVSRR KQTAVCCRSL GLNEKIPGII EELVKRHRQI DAVHFVQAFG LSEAFPPAPL LKTYVEELKD
401: TIENNVDATA TSLKDDPKSR ELLALRAVIK CIEEYKLQKE CSLGPLQKRV SELKPKGEKR PSTDAGRTYA KKPRGPGISF PRRPAGSVGS AARRPPFPGF
501: NWQRAPAPMP SHGPAPMPSR APLPDRYGAP DRYHHTPPAP VYEAGPFSSY GEPFSAPKPF QYTPGSVAAS YNSSPYKVAY GGPGAPAAST YAGYGGASGP
601: AGSSSYANYL VYRPPQP
001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
Arabidopsis Description
FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.