Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99638 | Sorghum | cytosol | 75.33 | 74.23 |
| Zm00001d022016_P001 | Maize | extracellular, plasma membrane | 73.52 | 71.75 |
| HORVU1Hr1G088810.2 | Barley | nucleus | 70.07 | 68.38 |
| Zm00001d006752_P003 | Maize | nucleus | 72.37 | 67.18 |
| TraesCS1D01G411200.1 | Wheat | nucleus | 68.91 | 66.51 |
| TraesCS1B01G432600.1 | Wheat | nucleus | 69.08 | 66.46 |
| TraesCS1A01G403200.1 | Wheat | nucleus | 68.59 | 66.09 |
| GSMUA_Achr5P16090_001 | Banana | nucleus | 45.72 | 45.72 |
| VIT_07s0129g00610.t01 | Wine grape | cytosol | 41.78 | 44.02 |
| KRH04492 | Soybean | nucleus | 36.51 | 40.14 |
| KRH58029 | Soybean | nucleus | 35.36 | 38.88 |
| Solyc04g008840.2.1 | Tomato | nucleus | 37.01 | 37.38 |
| PGSC0003DMT400065090 | Potato | nucleus | 37.01 | 37.01 |
| Os09t0248300-01 | Rice | cytosol | 31.74 | 35.61 |
| Os09t0248200-01 | Rice | cytosol | 31.25 | 34.86 |
| Os07t0173200-02 | Rice | cytosol | 23.52 | 26.78 |
| Os03t0794900-01 | Rice | nucleus | 23.68 | 26.18 |
| Os03t0193225-01 | Rice | plasma membrane | 16.94 | 20.04 |
| Os01t0181000-00 | Rice | nucleus | 17.93 | 18.32 |
| Os03t0851400-01 | Rice | extracellular | 12.01 | 16.67 |
Protein Annotations
| EnsemblPlants:Os07t0592300-01 | EnsemblPlantsGene:Os07g0592300 | EntrezGene:4343784 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida | ncoils:Coil |
| PANTHER:PTHR31791 | PANTHER:PTHR31791:SF4 | PFAM:PF07899 | ProteinID:BAC79626.1 | ProteinID:BAF22076.1 | ProteinID:BAT02450.1 |
| RefSeq:XP_015647752.1 | SEG:seg | UniParc:UPI00001B398D | UniProt:Q7XIP0 | MapMan:35.1 | : |
Description
Frigida-like family protein. (Os07t0592300-01)
Coordinates
chr7:-:24137963..24142912
Molecular Weight (calculated)
66733.4 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.603
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEDTSHIS GSSESTIPLL EQLAEVFGKL KSHTETSLQL QNGINWEDIK AHFLNLEKSY KSKCDELAEK QKALEEKKAE SCRLIAEKEA NVSAKERAFL
101: NQFQELRDTA VSALSEVRQK YKVELAGILD ANGSKDKKVR TSTNDMNALC ASEENTTASG LGEPSEASPV DVKPRPVLKQ LCEQMDTAGL LKFLSENWKK
201: LSSLRDELSA ALRCATDPAR FVLGSLEGFF PSDHTSSPGN KQIILQGQRR SCIILMEAIT PALATKEPGD NHPWSSEIRE LAKAIAEEWK SKLAEVDLDA
301: SDGYSLEAQA FLQLLTTFNV DSVLDEDELC KLVVAVSRRK QTAELCRSLC LNERIPDIIK ELVNRHRQID AVQFIHAFGL SESFPPAPLL KTYVEELKDS
401: LGNNGDGNAA SLKDDPKTRE LLALRAVIKC IEEYKLQKDY PLGPLQKRVA ELKSKGEKRP LEAGRHNAKK PRTFGNSAAR RPPNPVGSAG RRPSGPAGTW
501: QRPPPPMPSY PDRYGHADRY HYTAPSATYD PPAYASYSEP YSASKPYQYT PGSVAPASYN SNQFKVAYGG PGAPPTAGGY GSYNDAAGQS TSSSYSGYSG
601: YHPSLPRL
101: NQFQELRDTA VSALSEVRQK YKVELAGILD ANGSKDKKVR TSTNDMNALC ASEENTTASG LGEPSEASPV DVKPRPVLKQ LCEQMDTAGL LKFLSENWKK
201: LSSLRDELSA ALRCATDPAR FVLGSLEGFF PSDHTSSPGN KQIILQGQRR SCIILMEAIT PALATKEPGD NHPWSSEIRE LAKAIAEEWK SKLAEVDLDA
301: SDGYSLEAQA FLQLLTTFNV DSVLDEDELC KLVVAVSRRK QTAELCRSLC LNERIPDIIK ELVNRHRQID AVQFIHAFGL SESFPPAPLL KTYVEELKDS
401: LGNNGDGNAA SLKDDPKTRE LLALRAVIKC IEEYKLQKDY PLGPLQKRVA ELKSKGEKRP LEAGRHNAKK PRTFGNSAAR RPPNPVGSAG RRPSGPAGTW
501: QRPPPPMPSY PDRYGHADRY HYTAPSATYD PPAYASYSEP YSASKPYQYT PGSVAPASYN SNQFKVAYGG PGAPPTAGGY GSYNDAAGQS TSSSYSGYSG
601: YHPSLPRL
001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
Arabidopsis Description
FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.