Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G432600.1 | Wheat | nucleus | 97.46 | 97.31 |
| TraesCS1D01G411200.1 | Wheat | nucleus | 97.15 | 97.3 |
| HORVU1Hr1G088810.2 | Barley | nucleus | 89.54 | 90.69 |
| Os07t0592300-01 | Rice | nucleus | 66.09 | 68.59 |
| EER99638 | Sorghum | cytosol | 67.04 | 68.56 |
| Zm00001d022016_P001 | Maize | extracellular, plasma membrane | 65.13 | 65.97 |
| Zm00001d006752_P003 | Maize | nucleus | 64.82 | 62.44 |
| GSMUA_Achr5P16090_001 | Banana | nucleus | 42.79 | 44.41 |
| VIT_07s0129g00610.t01 | Wine grape | cytosol | 39.78 | 43.5 |
| KRH04492 | Soybean | nucleus | 33.91 | 38.7 |
| Solyc04g008840.2.1 | Tomato | nucleus | 36.45 | 38.21 |
| PGSC0003DMT400065090 | Potato | nucleus | 36.61 | 37.99 |
| KRH58029 | Soybean | nucleus | 33.12 | 37.79 |
| TraesCS5A01G168100.1 | Wheat | cytosol | 29.95 | 35.06 |
| TraesCS5A01G434500.1 | Wheat | cytosol | 22.35 | 25.45 |
| TraesCS4A01G039500.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 16.64 | 20.51 |
| TraesCS3A01G117300.1 | Wheat | cytosol, nucleus, plastid | 18.07 | 17.43 |
| TraesCS4A01G329000.1 | Wheat | plastid | 12.52 | 15.96 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G403200.1 | EnsemblPlantsGene:TraesCS1A01G403200 | InterPro:Frigida | ncoils:Coil | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF4 |
| PFAM:PF07899 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:566497676..566500308
Molecular Weight (calculated)
68167.5 Da
IEP (calculated)
8.595
GRAVY (calculated)
-0.543
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEAASHIS GGSDSTTVAL LEQLTEVFGK LKSHTEASLQ LQSGIQWEDI KVHFLNLEKS YRSKCDELED KQKALEEQKA GGRRLIAEKE ADLSAKERAS
101: VNKLQELKDA AVSTLAEVRK KYNVELSEIL DANGSKDKKV KTPTDDTNTS LPSDEHNSAK GSGKPSEPSP VEVKPRPALK ELCEQMDAKG LLKYISENSK
201: KLAGFRDELC VALKCATDPA RFVLDSLEGF FPDQLPGDKN YSAQGQRRSC IVLMEALAHS LGMKEPGGKH PWSSEIMEQA KAIAKEWKSK IAEVDLDASD
301: GYSLEAHAFL QLLTTFNVDL VLDEDELYKI VVAISRRRQT AELCRSLGLT ERIPGVIEEL IKKHRQIDAV QFIQAFGLSE AFPPAPLVKA YVDEIKGSLN
401: NKGDAGATPS VDDLKNRELV ALRAIIKCIE EYKLQKECPL GPLQKRINEL KPKGAKRPSG SANRNYAKKQ RVSGSGTSAP RRPTGAVAPR RPAAPVGTWQ
501: QRAPPPVAAY PDRYGVAADR YHYAPPPAAA YDAATYAAYG GGGEQYRAAA PKPYQYNPGS AAAAAAAASY NNIPQYKVVY GGPGAQPSTA AAGYAPYGGG
601: SVGQQQPQPA ASSGGYLSYA AGFGYRPSQQ Q
101: VNKLQELKDA AVSTLAEVRK KYNVELSEIL DANGSKDKKV KTPTDDTNTS LPSDEHNSAK GSGKPSEPSP VEVKPRPALK ELCEQMDAKG LLKYISENSK
201: KLAGFRDELC VALKCATDPA RFVLDSLEGF FPDQLPGDKN YSAQGQRRSC IVLMEALAHS LGMKEPGGKH PWSSEIMEQA KAIAKEWKSK IAEVDLDASD
301: GYSLEAHAFL QLLTTFNVDL VLDEDELYKI VVAISRRRQT AELCRSLGLT ERIPGVIEEL IKKHRQIDAV QFIQAFGLSE AFPPAPLVKA YVDEIKGSLN
401: NKGDAGATPS VDDLKNRELV ALRAIIKCIE EYKLQKECPL GPLQKRINEL KPKGAKRPSG SANRNYAKKQ RVSGSGTSAP RRPTGAVAPR RPAAPVGTWQ
501: QRAPPPVAAY PDRYGVAADR YHYAPPPAAA YDAATYAAYG GGGEQYRAAA PKPYQYNPGS AAAAAAAASY NNIPQYKVVY GGPGAQPSTA AAGYAPYGGG
601: SVGQQQPQPA ASSGGYLSYA AGFGYRPSQQ Q
001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
Arabidopsis Description
FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.