Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022016_P001 | Maize | extracellular, plasma membrane | 82.9 | 87.16 |
| Os07t0592300-01 | Rice | nucleus | 67.18 | 72.37 |
| HORVU1Hr1G088810.2 | Barley | nucleus | 62.75 | 65.97 |
| TraesCS1B01G432600.1 | Wheat | nucleus | 62.75 | 65.03 |
| TraesCS1D01G411200.1 | Wheat | nucleus | 62.44 | 64.92 |
| TraesCS1A01G403200.1 | Wheat | nucleus | 62.44 | 64.82 |
| GSMUA_Achr5P16090_001 | Banana | nucleus | 44.27 | 47.7 |
| VIT_07s0129g00610.t01 | Wine grape | cytosol | 36.95 | 41.94 |
| KRH04492 | Soybean | nucleus | 32.98 | 39.06 |
| KRH58029 | Soybean | nucleus | 32.52 | 38.52 |
| Solyc04g008840.2.1 | Tomato | nucleus | 34.35 | 37.38 |
| PGSC0003DMT400065090 | Potato | nucleus | 34.66 | 37.34 |
| Zm00001d019892_P001 | Maize | nucleus | 21.22 | 34.32 |
| Zm00001d005107_P001 | Maize | cytosol | 27.48 | 33.71 |
| Zm00001d019890_P001 | Maize | nucleus | 26.87 | 32.96 |
| Zm00001d007835_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 20.92 | 23.7 |
| Zm00001d018911_P001 | Maize | cytosol | 21.68 | 23.39 |
| Zm00001d039594_P001 | Maize | extracellular, plasma membrane | 18.47 | 18.94 |
| Zm00001d028173_P002 | Maize | plastid | 14.66 | 18.75 |
Protein Annotations
| EnsemblPlants:Zm00001d006752_P003 | EnsemblPlants:Zm00001d006752_T003 | EnsemblPlantsGene:Zm00001d006752 | EntrezGene:100191985 | GO:GO:0000003 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | InterPro:Frigida |
| ncoils:Coil | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF4 | PFAM:PF07899 | ProteinID:ONM24918.1 | SEG:seg |
| UniParc:UPI0008442D0B | UniProt:A0A1D6F071 | MapMan:35.1 | : | : | : |
Description
FRIGIDA-like protein 3
Coordinates
chr2:-:215863053..215868900
Molecular Weight (calculated)
70907.6 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.434
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSLFSDVA DYYWFCCKMD TEATLNKSGG SESVMSLLEQ LAEVFGNLKS HTEAFLQLQN GMQWEDIKGH FLSLDKSYGS KFDELVEKQK ALEEKKAEAC
101: RLIAEKEADI SIKERASLNQ LQELRDAAVS SLAEVRQKYK VELAEILDTS ESKYKKVSTS INDSNASLAS EENTLATGSG EASEASPVET KPRSVLKQLC
201: EQMDTKGLLK FLSVNCRKLA TASLRAELSV ALKCATDPAR LVLNSLEGFF PPEQTNSPGS EHNGLQVQRK SCIVLMDAIA PALGTKEPGG NDPWSSEIKE
301: QAKAIAEEWK SKLAEVDLDA SNGYSLEAQA FLQLLTTFNV DSVLDEDELC KIVVAVSRRK QTAVSCRSLG LNEKIPGIIE ELVKRHRQID AVHFIQAFGL
401: SETFPPAPLL KTYIEEFKDT IENNGDATVS LLKDDPKSRE LLTLRAVIKC IEEYKLQKEY SLGPLQKRVS ELKPKGEKRP STDAGGRTYA KKPRGPGISF
501: TRRPGGSIGS AARRPPFPGY SWQRAPAPMP SHGPAPMPSR APLPDGYGAA DRYHYTPPAP AYDAGAFSSY GEPFSTPKPF QYAPGSVAAS YNSSPYKIAY
601: GGPGAPAASA YAGYSGGAQA PAASAYTGYS GGSGPAASSS YANYLGSVYC PPQQP
101: RLIAEKEADI SIKERASLNQ LQELRDAAVS SLAEVRQKYK VELAEILDTS ESKYKKVSTS INDSNASLAS EENTLATGSG EASEASPVET KPRSVLKQLC
201: EQMDTKGLLK FLSVNCRKLA TASLRAELSV ALKCATDPAR LVLNSLEGFF PPEQTNSPGS EHNGLQVQRK SCIVLMDAIA PALGTKEPGG NDPWSSEIKE
301: QAKAIAEEWK SKLAEVDLDA SNGYSLEAQA FLQLLTTFNV DSVLDEDELC KIVVAVSRRK QTAVSCRSLG LNEKIPGIIE ELVKRHRQID AVHFIQAFGL
401: SETFPPAPLL KTYIEEFKDT IENNGDATVS LLKDDPKSRE LLTLRAVIKC IEEYKLQKEY SLGPLQKRVS ELKPKGEKRP STDAGGRTYA KKPRGPGISF
501: TRRPGGSIGS AARRPPFPGY SWQRAPAPMP SHGPAPMPSR APLPDGYGAA DRYHYTPPAP AYDAGAFSSY GEPFSTPKPF QYAPGSVAAS YNSSPYKIAY
601: GGPGAPAASA YAGYSGGAQA PAASAYTGYS GGSGPAASSS YANYLGSVYC PPQQP
001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH
Arabidopsis Description
FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.