Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92706 | Sorghum | plastid | 90.62 | 90.45 |
| TraesCS4B01G266000.1 | Wheat | cytosol, nucleus, plasma membrane | 63.28 | 65.06 |
| TraesCS4D01G265900.1 | Wheat | nucleus | 63.09 | 64.86 |
| HORVU4Hr1G071420.1 | Barley | cytosol, plastid | 61.91 | 63.78 |
| Os03t0193225-01 | Rice | plasma membrane | 60.35 | 60.12 |
| TraesCS4A01G039500.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 59.77 | 59.77 |
| GSMUA_Achr9P09220_001 | Banana | nucleus | 20.7 | 26.77 |
| GSMUA_Achr6P24860_001 | Banana | nucleus | 23.83 | 25.15 |
| KRH73863 | Soybean | nucleus | 20.51 | 20.23 |
| KRG98570 | Soybean | cytosol, nucleus, plastid | 20.12 | 18.76 |
| CDX99994 | Canola | peroxisome | 12.11 | 18.56 |
| CDY19713 | Canola | cytosol | 10.94 | 18.42 |
| KRH46301 | Soybean | cytosol | 19.53 | 18.32 |
| Zm00001d007835_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 19.53 | 17.3 |
| Zm00001d005107_P001 | Maize | cytosol | 17.58 | 16.85 |
| Zm00001d018911_P001 | Maize | cytosol | 19.73 | 16.64 |
| Zm00001d019890_P001 | Maize | nucleus | 17.19 | 16.48 |
| VIT_14s0030g00690.t01 | Wine grape | extracellular, golgi | 13.87 | 16.25 |
| Zm00001d022016_P001 | Maize | extracellular, plasma membrane | 18.36 | 15.09 |
| Zm00001d006752_P003 | Maize | nucleus | 18.75 | 14.66 |
| Zm00001d019892_P001 | Maize | nucleus | 11.52 | 14.57 |
| CDX99996 | Canola | extracellular | 4.1 | 13.04 |
| Zm00001d039594_P001 | Maize | extracellular, plasma membrane | 16.02 | 12.83 |
| Bra036105.1-P | Field mustard | nucleus | 15.62 | 9.59 |
| CDX86173 | Canola | cytosol | 16.02 | 9.49 |
| Bra009973.1-P | Field mustard | cytosol | 16.02 | 9.44 |
| AT5G27230.1 | Thale cress | nucleus | 16.21 | 8.76 |
| CDX80668 | Canola | cytosol, mitochondrion, plasma membrane | 14.84 | 8.52 |
| PGSC0003DMT400036725 | Potato | nucleus | 3.71 | 6.99 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 2.93 | 3.13 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 2.73 | 2.92 |
Protein Annotations
| EMBL:BT054310 | EnsemblPlants:Zm00001d028173_P002 | EnsemblPlants:Zm00001d028173_T002 | EnsemblPlantsGene:Zm00001d028173 | EntrezGene:100279474 | GO:GO:0000003 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 |
| InterPro:Frigida | ncoils:Coil | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF5 | PFAM:PF07899 | ProteinID:ONL94874.1 |
| SEG:seg | UniParc:UPI00019174EE | UniProt:B7ZYB8 | MapMan:35.1 | : | : |
Description
FRIGIDA-like protein 1
Coordinates
chr1:+:25305829..25316655
Molecular Weight (calculated)
55130.1 Da
IEP (calculated)
10.011
GRAVY (calculated)
-0.217
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSAPSIPG VIASLQAYST ALSAFTAAWR AVETHASTLD SALAARLAGF SELELICSAM DGAGLRAYLT EHRDELKDPT RALDAALQVA PDPGLLVLSA
101: AASFCRTLPE VAKSDGSVKA SCRLLIALLD RLRAIGVKPS PEAREEARAV ATDWKRGKRI GTETMFKQET FAFLHLVGVF GLVEDVGGTS EVLDLVVSIS
201: GRERAVDAFV VLGLDLDQHM PILIQKMVNK NKQLEAVKFI QALNIAHKYA LLPIMRSYID HAAVAGKMIR IRGDDLATQN AADAKERTLI GTLQKFIKEQ
301: KLEELPIFEE ANKRMAHLDQ QSAERKRTAA AAAAAARKVS KNIEEQQKRI QELMQPAKRP RSENVVKGSS GQNVNFAGTS TQQFKPQQSI HKAGVSNQYQ
401: AALTQNVLPA IAQISQLVAG SHRPVGIPNQ ALAVPPQYGS GSANYYGVTS TRPYRPITLP PGPGALNGPS AQASSRSRLY SGDPLAAVSR SSDKKGSSYK
501: YSLSSMSTYD RK
101: AASFCRTLPE VAKSDGSVKA SCRLLIALLD RLRAIGVKPS PEAREEARAV ATDWKRGKRI GTETMFKQET FAFLHLVGVF GLVEDVGGTS EVLDLVVSIS
201: GRERAVDAFV VLGLDLDQHM PILIQKMVNK NKQLEAVKFI QALNIAHKYA LLPIMRSYID HAAVAGKMIR IRGDDLATQN AADAKERTLI GTLQKFIKEQ
301: KLEELPIFEE ANKRMAHLDQ QSAERKRTAA AAAAAARKVS KNIEEQQKRI QELMQPAKRP RSENVVKGSS GQNVNFAGTS TQQFKPQQSI HKAGVSNQYQ
401: AALTQNVLPA IAQISQLVAG SHRPVGIPNQ ALAVPPQYGS GSANYYGVTS TRPYRPITLP PGPGALNGPS AQASSRSRLY SGDPLAAVSR SSDKKGSSYK
501: YSLSSMSTYD RK
001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
Arabidopsis Description
FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.