Factsheet for Os09t0248300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0621300-01
Os02t0258300-01
Os03t0411000-01
Os03t0794900-01
Os05t0586400-01
Os06t0206100-01
Os06t0524300-01
Os07t0173200-02
Os11t0104866-00
Os11t0104900-00
Os12t0104766-00
Os12t0104800-01
Os12t0502300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48385.1	Os01t0621300-01	AT1G01440.1	21798944
AT5G48385.1	Os02t0258300-01	AT1G01440.1	21798944
AT5G48385.1	Os05t0586400-01	AT1G01440.1	21798944
AT5G48385.1	Os06t0524300-01	AT1G01440.1	21798944
AT5G48385.1	Os12t0502300-01	AT1G15570.1	21798944
AT5G48385.1	Os11t0104866-00	AT3G08530.1	21798944
AT5G48385.1	Os11t0104900-00	AT3G08530.1	21798944
AT5G48385.1	Os12t0104766-00	AT3G08530.1	21798944
AT5G48385.1	Os12t0104800-01	AT3G08530.1	21798944
AT5G48385.1	Os03t0411000-01	AT3G13990.1	21798944
AT5G48385.1	Os06t0206100-01	AT3G13990.1	21798944
AT5G48385.1	Os03t0794900-01	AT3G22440.1	21798944
AT5G48385.1	Os07t0173200-02	AT3G22440.1	21798944
AT5G48385.1	Os03t0794900-01	AT4G14900.1	21798944
AT5G48385.1	Os07t0173200-02	AT4G14900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0248200-01	Rice	cytosol	92.44	91.93
HORVU5Hr1G051330.1	Barley	cytosol	78.78	79.22
TraesCS5A01G168100.1	Wheat	cytosol	78.6	79.04
TraesCS5D01G172300.2	Wheat	cytosol	78.78	77.08
TraesCS5B01G164900.2	Wheat	cytosol	78.04	76.35
EES02294	Sorghum	nucleus	75.09	75.93
Zm00001d005107_P001	Maize	cytosol	73.8	74.91
Zm00001d019890_P001	Maize	nucleus	72.88	73.97
Zm00001d019892_P001	Maize	nucleus	55.17	73.83
GSMUA_Achr2P05710_001	Banana	nucleus	23.99	67.01
GSMUA_Achr8P29000_001	Banana	nucleus	62.55	62.78
GSMUA_Achr9P08130_001	Banana	cytosol	58.12	58.33
GSMUA_Achr3P16830_001	Banana	endoplasmic reticulum, golgi	62.92	57.99
VIT_07s0151g00650.t01	Wine grape	endoplasmic reticulum, extracellular	56.27	54.17
KRH66282	Soybean	cytosol	54.43	54.03
KRH07289	Soybean	cytosol	54.24	53.85
Solyc06g007640.2.1	Tomato	nucleus	52.77	53.36
KRH66280	Soybean	cytosol	53.32	53.12
PGSC0003DMT400053214	Potato	cytosol	53.51	53.11
Solyc06g082930.2.1	Tomato	nucleus	51.84	52.52
PGSC0003DMT400071153	Potato	nucleus	52.4	52.11
Bra020704.1-P	Field mustard	cytosol	48.89	51.06
CDY05684	Canola	cytosol	48.52	50.87
CDY48750	Canola	cytosol	49.26	50.66
Bra036176.1-P	Field mustard	cytosol	47.97	50.0
Bra037489.1-P	Field mustard	cytosol	50.0	49.54
CDY00062	Canola	cytosol, mitochondrion, nucleus, plastid	19.37	49.3
CDY00066	Canola	cytosol	48.52	49.25
AT5G48385.1	Thale cress	cytosol	50.55	49.1
Os07t0592300-01	Rice	nucleus	35.61	31.74
Os07t0173200-02	Rice	cytosol	27.31	27.72
Os03t0794900-01	Rice	nucleus	25.83	25.45
Os01t0181000-00	Rice	nucleus	22.69	20.67
Os03t0193225-01	Rice	plasma membrane	18.63	19.65
CDX86307	Canola	nucleus	49.82	18.08
Os03t0851400-01	Rice	extracellular	14.58	18.04
CDX85335	Canola	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	50.37	16.88
Bra037488.1-P	Field mustard	cytosol	0.18	0.11

Protein Annotations

MapMan:35.1	EntrezGene:4346501	EMBL:AK099919	ProteinID:BAF24582.1	ProteinID:BAT07029.1	ncoils:Coil
ProteinID:EEE69257.1	InterPro:Frigida	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	EnsemblPlantsGene:Os09g0248300	EnsemblPlants:Os09t0248300-01	PFAM:PF07899
PANTHER:PTHR31791	PANTHER:PTHR31791:SF12	UniProt:Q0J383	UniParc:UPI0000DD9638	RefSeq:XP_015612228.1	SEG:seg

Description

Tektin domain containing protein. (Os09t0248300-01)

Coordinates

chr9:-:3670047..3675486

Molecular Weight (calculated)

60765.0 Da

IEP (calculated)

7.651

GRAVY (calculated)

-0.390

Length

542 amino acids

Sequence
(BLAST)

001: MSDMESMTAL MESTGSKLQL LQRAFAELES QSAVSLNLKW KQLEDHFHGL EQSLKKKFDE LKEQEKEFKE TVTKSEQMLE QQEAAVVAKE LTSLERLQQK
101: RDAALAMIFG KSKLNLSMPV INPISKSVSN NAVLNGNIAS LWPKPATAHG AYLQDGNTAV KPRSQLVILC EEMNVNGLHK FISDNRKDLT SIREEIPVAL
201: RGATDPYGLV LASLEDFYFG DNLILDGKKD GNLLGVRRTC LMLMESLAQL QTDATTGFIS KGQMLTASIK ERAKKIALEW KSKLDSLDFD ASNGNCLEAH
301: AFLQLLATFA IFSEFAEDEL CKLLPSVSRR RQTPELCRIL GLSQNMPGVI GVLIENGRTI DAINLAYAFE LTDQFEPVEL LKAYLKEVKS MSHVKTGKMS
401: PGVQNEINER ELSALKAVIK CIEEHKLDEK YPIDPLQRRV IQLEKAKADK RRAVEAGKPQ SKRPRANGSV YAPHITSFSD KSFYQAAAPQ RHSYPYERQY
501: VYGAEAHHHP TMISSAPYGM SPAHTTYYGN GYQVQYQVPY IH

Best Arabidopsis Sequence Match ( AT5G48385.1 )
(BLAST)

001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH

Arabidopsis Description

FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.