Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88029 | Sorghum | nucleus | 71.43 | 71.01 |
| Zm00001d044979_P010 | Maize | nucleus | 70.02 | 70.19 |
| TraesCS7D01G167400.1 | Wheat | cytosol, nucleus | 69.56 | 68.59 |
| HORVU7Hr1G034850.1 | Barley | cytosol, nucleus, plastid | 68.85 | 68.21 |
| Zm00001d037122_P009 | Maize | nucleus | 68.27 | 67.79 |
| TraesCS7B01G071400.2 | Wheat | nucleus | 68.85 | 67.66 |
| TraesCS7A01G166800.4 | Wheat | nucleus | 69.32 | 66.82 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 14.05 | 46.88 |
| Os09t0261400-01 | Rice | plasma membrane | 4.1 | 43.75 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 37.82 | 39.93 |
| GSMUA_Achr3P07830_001 | Banana | nucleus | 39.46 | 39.69 |
| Solyc12g049230.1.1 | Tomato | nucleus | 34.54 | 37.39 |
| KRH06147 | Soybean | nucleus | 37.12 | 36.86 |
| KRH47571 | Soybean | nucleus | 37.24 | 36.85 |
| GSMUA_Achr3P20190_001 | Banana | nucleus | 30.56 | 33.72 |
| AT3G13990.1 | Thale cress | nucleus | 32.32 | 32.55 |
| CDY65326 | Canola | nucleus | 30.68 | 30.79 |
| CDX97535 | Canola | nucleus | 31.03 | 30.71 |
| Bra021524.1-P | Field mustard | nucleus | 30.56 | 29.97 |
| CDY33258 | Canola | nucleus | 30.56 | 29.97 |
| Bra027380.1-P | Field mustard | nucleus | 31.03 | 29.38 |
| CDY39087 | Canola | nucleus | 29.98 | 29.32 |
| Os03t0411000-01 | Rice | nucleus | 23.77 | 26.33 |
| Os05t0566900-01 | Rice | extracellular | 16.04 | 16.08 |
| Os01t0663800-01 | Rice | plasma membrane | 15.69 | 15.75 |
| Os05t0581800-01 | Rice | nucleus | 14.17 | 14.2 |
Protein Annotations
| EMBL:AK121282 | EnsemblPlants:Os06t0206100-01 | EnsemblPlantsGene:Os06g0206100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF28 | PFAM:PF06972 | ProteinID:BAD35846.1 |
| ProteinID:BAD36202.1 | ProteinID:BAF19008.1 | ProteinID:BAS96697.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00004038E1 |
| UniProt:Q69NN2 | MapMan:35.2 | : | : | : | : |
Description
Similar to Gb protein. (Os06t0206100-01);Similar to Gb protein. (Os06t0206100-02)
Coordinates
chr6:+:5359594..5367027
Molecular Weight (calculated)
92203.3 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.786
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGRAGTE KGAAAGRGQT AIQSTIQSIK EVVGGHSDAD IYAALRECNM DPNETTQKLL NQDPFHEVKR KRDKKRESAG QKTVPDASAQ AEHNSQWTKP
101: RTQRVENDQR RAYSHGQASG PNREFRVVRD SRHGVVENRP ELGHKGSPNV KVSDRSVPVV QTGRNHPPAT TSEGQITQGA KHSYNSDVHQ VKRQAQGTAQ
201: KYVKPHLKNS QDEQHPPTSD PAHTRPNLKA AEGAVGSVRR HVGVVNVQRQ PSGRSSSHLH VQSGGSHVNN QRGNFVPGGP SGRHFMSKNM QSVHRTALDS
301: VHRGRSGGRS FVASSSKYQQ GPASNQKVTQ PAKEWKPKST KKSSNIDTDN NNGTDVITTS ASNTENSNVL DENALCEKTS QACIHEVEHV IIPEHLRVPE
401: YEQTGLRFGS FSPGSGADQV SSSESPSESE EQEHVQEPVQ LVVEDDSLRA GHDEVDVEAR SSQLNLSTLT AEISLPPSED SVEMNGEEVE NDDGLGLVQS
501: DTPLAPVDGQ NMQSASNLTA FSTYGHEDPN MHPSNEAQLY RLVEPNVHPQ VMASPSQGYP SENPEADNAV QVFRIPESNV HSQVLPSTSE AISSQIVSSS
601: PVAISQQLQH MSQPQQAAQL YPPVHMQHYP NFMPYRHHIY SPVYVPPMAM PNFPTNIPYP SNGNNYLQMP GGGSHLAAGG MKYGVSQYKP VPAGSPSGYG
701: NYTHPAGFTF SSPGVGVIGG AVGVDDVNRI KYKDNNLYAP SPQVETSDIW IQTPREMPTL QCPPYFNLSG QATSGAFVPN PGNASFNATA QSSHAQFPGL
801: YHAQQPSSIV SPHPMVHQQV QSAIGPNGGV GVATPAPQVG AYQQPQLGHW RPGF
101: RTQRVENDQR RAYSHGQASG PNREFRVVRD SRHGVVENRP ELGHKGSPNV KVSDRSVPVV QTGRNHPPAT TSEGQITQGA KHSYNSDVHQ VKRQAQGTAQ
201: KYVKPHLKNS QDEQHPPTSD PAHTRPNLKA AEGAVGSVRR HVGVVNVQRQ PSGRSSSHLH VQSGGSHVNN QRGNFVPGGP SGRHFMSKNM QSVHRTALDS
301: VHRGRSGGRS FVASSSKYQQ GPASNQKVTQ PAKEWKPKST KKSSNIDTDN NNGTDVITTS ASNTENSNVL DENALCEKTS QACIHEVEHV IIPEHLRVPE
401: YEQTGLRFGS FSPGSGADQV SSSESPSESE EQEHVQEPVQ LVVEDDSLRA GHDEVDVEAR SSQLNLSTLT AEISLPPSED SVEMNGEEVE NDDGLGLVQS
501: DTPLAPVDGQ NMQSASNLTA FSTYGHEDPN MHPSNEAQLY RLVEPNVHPQ VMASPSQGYP SENPEADNAV QVFRIPESNV HSQVLPSTSE AISSQIVSSS
601: PVAISQQLQH MSQPQQAAQL YPPVHMQHYP NFMPYRHHIY SPVYVPPMAM PNFPTNIPYP SNGNNYLQMP GGGSHLAAGG MKYGVSQYKP VPAGSPSGYG
701: NYTHPAGFTF SSPGVGVIGG AVGVDDVNRI KYKDNNLYAP SPQVETSDIW IQTPREMPTL QCPPYFNLSG QATSGAFVPN PGNASFNATA QSSHAQFPGL
801: YHAQQPSSIV SPHPMVHQQV QSAIGPNGGV GVATPAPQVG AYQQPQLGHW RPGF
001: MVTGSRTSGN RGVGLDDEAK KMIQSIKEVV DSHSDADIYT ALKEANMDAN EAVEKLIHQD PFHEVKRKRD RKKEDTVFVE PANIKKPLEN VTSEVKVRTQ
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
Arabidopsis Description
AT3g13990/MDC16_11 [Source:UniProtKB/TrEMBL;Acc:Q8L7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.