Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47571 | Soybean | nucleus | 94.3 | 93.97 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 22.44 | 75.39 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 63.84 | 67.86 |
| Solyc12g049230.1.1 | Tomato | nucleus | 52.56 | 57.29 |
| AT3G13990.1 | Thale cress | nucleus | 49.77 | 50.47 |
| CDY65326 | Canola | nucleus | 48.26 | 48.77 |
| CDX97535 | Canola | nucleus | 48.84 | 48.67 |
| CDY33258 | Canola | nucleus | 48.26 | 47.65 |
| Bra021524.1-P | Field mustard | nucleus | 48.02 | 47.42 |
| CDY39087 | Canola | nucleus | 48.02 | 47.31 |
| Bra027380.1-P | Field mustard | nucleus | 48.6 | 46.34 |
| GSMUA_Achr3P07830_001 | Banana | nucleus | 44.88 | 45.47 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.07 | 44.3 |
| GSMUA_Achr3P20190_001 | Banana | nucleus | 33.6 | 37.34 |
| Os06t0206100-01 | Rice | nucleus | 36.86 | 37.12 |
| EER88029 | Sorghum | nucleus | 36.86 | 36.9 |
| TraesCS7D01G167400.1 | Wheat | cytosol, nucleus | 36.98 | 36.72 |
| TraesCS7B01G071400.2 | Wheat | nucleus | 36.86 | 36.48 |
| Zm00001d044979_P010 | Maize | nucleus | 35.93 | 36.27 |
| Zm00001d037122_P009 | Maize | nucleus | 35.81 | 35.81 |
| TraesCS7A01G166800.4 | Wheat | nucleus | 36.86 | 35.78 |
| HORVU7Hr1G034850.1 | Barley | cytosol, nucleus, plastid | 35.81 | 35.73 |
| Os03t0411000-01 | Rice | nucleus | 30.58 | 34.11 |
| Zm00001d029487_P001 | Maize | nucleus | 26.51 | 30.89 |
| KXG39164 | Sorghum | nucleus | 27.67 | 30.36 |
| KRH72609 | Soybean | nucleus | 26.51 | 25.79 |
| KRH16977 | Soybean | nucleus | 26.16 | 25.63 |
| KRH73929 | Soybean | nucleus | 20.58 | 23.17 |
| KRH14203 | Soybean | nucleus | 20.81 | 23.16 |
| KRH11725 | Soybean | nucleus | 18.84 | 19.29 |
| KRH36716 | Soybean | nucleus | 18.37 | 18.85 |
| KRH42968 | Soybean | nucleus | 18.02 | 18.52 |
| KRH59101 | Soybean | nucleus | 17.79 | 18.11 |
| KRG98923 | Soybean | nucleus | 3.84 | 16.34 |
| KRH46046 | Soybean | nucleus | 11.4 | 12.08 |
Protein Annotations
| EMBL:ACUP02009816 | EnsemblPlants:KRH06147 | EnsemblPlantsGene:GLYMA_16G006000 | EntrezGene:100806038 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF28 | PFAM:PF06972 |
| ProteinID:KRH06147 | ProteinID:KRH06147.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023D7EA4 | UniProt:I1MJY7 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:458422..467350
Molecular Weight (calculated)
92974.6 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.776
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPGSKTEGG GTGTTHLLSA RVRKTIQSIK EIVGNHSDAD IYVALKEANM DPNETTQKLL NQDPFHEVKR RRDRKKETQN VGNRGQPSAD SRRPSENNSG
101: QGMKFHTHSE RNVRRTNYSR STFPGISREF RVVRDNRVNH IYKEVTPLSQ QHSTSVTEQL NVNISDKGSS ISTNHRSSGS RNSSQASNGP SDSHARYAPK
201: TIDRKIVYED KDKQGMISNA AGRVQPIKPN SVHQNSALVA STSSAVGVYS SSTDPVHVPS PDSRSPGVVG AIRREVGFVG VRRQSSDNKA KQSFAPSSPH
301: VVGKDGTSAD SFQSVGAVSK TEQFSQTNVT EPSLSGMPVS RPSLNNQHNN RPHQQLVGHQ RVSQQNKEWK PKSSQKPNCN NSPGVIGTPK KAAAAASPPA
401: ENSGDIESNT VELQDKLSQV NIYENQNVII AQHIRVPETD RCRLTFGTIG TELDSSRPQS KYHIIGASEK SNEELTASLT VPAPELSTDD VSGSKQVDLR
501: DEHIRSLGSD SPVSGATSEQ QLPDNKDSSN TKNLDNYANI GLVRDSSPSY APSEQQQQDS HDMPGFAAYD SPAGYDIPYF RPTIDETVRG QGLSSPQEAL
601: ISHPTNTPAS TIAMVQQQQP PVPQMYPQVH VSHFANLMPY RQFLSPVYVP PMAMPGYSSN PPYPHPTNGS SYLLMPGGGS HLNANNLKYG VQQFKPVPAG
701: SPTGFGNFAN PTGYAMITPG VVGGATALED SSRVKYKDNL YVPNPQAETS EIWLQNPRDH PGMQSTPYYN MPGQTPHAAY MPSHTGHASF NGATAQSSHM
801: QFPGMYHTPP QPAAMASPHH LGPPAIGNNV GVGVAAAAPG AQVGAYQQPQ LGHINWTTNF
101: QGMKFHTHSE RNVRRTNYSR STFPGISREF RVVRDNRVNH IYKEVTPLSQ QHSTSVTEQL NVNISDKGSS ISTNHRSSGS RNSSQASNGP SDSHARYAPK
201: TIDRKIVYED KDKQGMISNA AGRVQPIKPN SVHQNSALVA STSSAVGVYS SSTDPVHVPS PDSRSPGVVG AIRREVGFVG VRRQSSDNKA KQSFAPSSPH
301: VVGKDGTSAD SFQSVGAVSK TEQFSQTNVT EPSLSGMPVS RPSLNNQHNN RPHQQLVGHQ RVSQQNKEWK PKSSQKPNCN NSPGVIGTPK KAAAAASPPA
401: ENSGDIESNT VELQDKLSQV NIYENQNVII AQHIRVPETD RCRLTFGTIG TELDSSRPQS KYHIIGASEK SNEELTASLT VPAPELSTDD VSGSKQVDLR
501: DEHIRSLGSD SPVSGATSEQ QLPDNKDSSN TKNLDNYANI GLVRDSSPSY APSEQQQQDS HDMPGFAAYD SPAGYDIPYF RPTIDETVRG QGLSSPQEAL
601: ISHPTNTPAS TIAMVQQQQP PVPQMYPQVH VSHFANLMPY RQFLSPVYVP PMAMPGYSSN PPYPHPTNGS SYLLMPGGGS HLNANNLKYG VQQFKPVPAG
701: SPTGFGNFAN PTGYAMITPG VVGGATALED SSRVKYKDNL YVPNPQAETS EIWLQNPRDH PGMQSTPYYN MPGQTPHAAY MPSHTGHASF NGATAQSSHM
801: QFPGMYHTPP QPAAMASPHH LGPPAIGNNV GVGVAAAAPG AQVGAYQQPQ LGHINWTTNF
001: MVTGSRTSGN RGVGLDDEAK KMIQSIKEVV DSHSDADIYT ALKEANMDAN EAVEKLIHQD PFHEVKRKRD RKKEDTVFVE PANIKKPLEN VTSEVKVRTQ
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
Arabidopsis Description
AT3g13990/MDC16_11 [Source:UniProtKB/TrEMBL;Acc:Q8L7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.