Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39164 | Sorghum | nucleus | 87.8 | 82.65 |
| Os03t0411000-01 | Rice | nucleus | 60.03 | 57.46 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 13.01 | 37.5 |
| Solyc12g049230.1.1 | Tomato | nucleus | 31.44 | 29.4 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 31.98 | 29.17 |
| KRH47571 | Soybean | nucleus | 31.57 | 27.0 |
| KRH06147 | Soybean | nucleus | 30.89 | 26.51 |
| Zm00001d037122_P009 | Maize | nucleus | 28.46 | 24.42 |
| Zm00001d044979_P010 | Maize | nucleus | 28.05 | 24.3 |
| AT3G13990.1 | Thale cress | nucleus | 27.78 | 24.17 |
| CDY65326 | Canola | nucleus | 27.37 | 23.74 |
| CDX97535 | Canola | nucleus | 27.51 | 23.52 |
| CDY33258 | Canola | nucleus | 27.37 | 23.19 |
| CDY39087 | Canola | nucleus | 27.24 | 23.02 |
| Bra021524.1-P | Field mustard | nucleus | 26.83 | 22.73 |
| Bra027380.1-P | Field mustard | nucleus | 27.78 | 22.73 |
| Zm00001d017358_P001 | Maize | nucleus | 2.98 | 20.0 |
| Zm00001d035703_P001 | Maize | nucleus | 6.5 | 17.78 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 3.12 | 15.03 |
| Zm00001d050112_P011 | Maize | nucleus | 14.91 | 12.99 |
| Zm00001d004950_P001 | Maize | nucleus | 5.15 | 12.26 |
| Zm00001d011517_P002 | Maize | nucleus | 13.28 | 11.67 |
| Zm00001d043962_P001 | Maize | nucleus | 13.28 | 11.64 |
| Zm00001d009591_P006 | Maize | nucleus | 13.14 | 11.32 |
| Zm00001d039041_P007 | Maize | nucleus | 12.87 | 10.53 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 2.98 | 9.82 |
| Zm00001d039138_P012 | Maize | nucleus | 10.84 | 9.65 |
| Zm00001d009683_P004 | Maize | nucleus | 10.57 | 9.17 |
| Zm00001d050118_P001 | Maize | mitochondrion | 4.47 | 7.86 |
Protein Annotations
| EnsemblPlants:Zm00001d029487_P001 | EnsemblPlants:Zm00001d029487_T001 | EnsemblPlantsGene:Zm00001d029487 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF36 | ProteinID:ONL98834.1 |
| SEG:seg | UniParc:UPI00084296A3 | UniProt:A0A1D6K5H4 | MapMan:35.2 | : | : |
Description
GBF-interacting protein 1
Coordinates
chr1:+:72828318..72836027
Molecular Weight (calculated)
79130.4 Da
IEP (calculated)
7.649
GRAVY (calculated)
-0.515
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRGGSSGF IEYFHNSTKR HGSNRENTSQ QGMNAIRVQK EMKKEWARPG RVFNRNITRG GYSRSSLPGV TQEFRVVKDN RIKLKEVSET LPEASQNGDS
101: SNECAFSNVR DKCSTKKLAA QHHLVTCNVN GHGAAHADNG IKIAAQAHDK EVKPSIVRKM EQYEGTQASL VGSHAVLGKG NQNTVDTAAS GKNNFGGELC
201: CSSSDPIHVP SPGSKSAGTF GAIKREVGVV GARQRPADSA AIYTSTSNGL VKVVSAPKVS PHLEWKPKSV SPSTAAPPGA PSPVDDGSKT EVSALSKKLS
301: HANVSHEHVI IPEHIRIPDS ERTHFIFGSF ESEIYPKASL AAYYDAVAKE DLNDHSPSSV AALGFTSTDG TLNDRMDNVG SCSPLPQSEP AVSVSEHEQS
401: LTECVDVRSP GVVGGTNETI SSKVTHSQPR LQHQEAAQNF KAYEPDSGYG MSFITKVDGE AAQGIAYSSE AMVLHSVNGY QLPASTATQQ PVPQMFSQQF
501: QAPQYPNFLP YRHVFSPQFG SLMVVPNYSS NHAFPQLPHA SSYLVMPNGA SQLAANGMKY GSNHQYKQVF QGAPAGYGYG NHNGYPNGVI GGTGAIEDMN
601: MSKYKDNCLY APNPQVETAD VWIQSQKESP NMPSAPFYNM VGQPVSPHAA YLPPQSGHTA FSPAPSHPGH LQYPGFVHAL QPTSMTMVQN PQTMIHQPAA
701: PPLAGNLGLD MSAMVPGNQV GAFQHNQLAH LGWTTQSF
101: SNECAFSNVR DKCSTKKLAA QHHLVTCNVN GHGAAHADNG IKIAAQAHDK EVKPSIVRKM EQYEGTQASL VGSHAVLGKG NQNTVDTAAS GKNNFGGELC
201: CSSSDPIHVP SPGSKSAGTF GAIKREVGVV GARQRPADSA AIYTSTSNGL VKVVSAPKVS PHLEWKPKSV SPSTAAPPGA PSPVDDGSKT EVSALSKKLS
301: HANVSHEHVI IPEHIRIPDS ERTHFIFGSF ESEIYPKASL AAYYDAVAKE DLNDHSPSSV AALGFTSTDG TLNDRMDNVG SCSPLPQSEP AVSVSEHEQS
401: LTECVDVRSP GVVGGTNETI SSKVTHSQPR LQHQEAAQNF KAYEPDSGYG MSFITKVDGE AAQGIAYSSE AMVLHSVNGY QLPASTATQQ PVPQMFSQQF
501: QAPQYPNFLP YRHVFSPQFG SLMVVPNYSS NHAFPQLPHA SSYLVMPNGA SQLAANGMKY GSNHQYKQVF QGAPAGYGYG NHNGYPNGVI GGTGAIEDMN
601: MSKYKDNCLY APNPQVETAD VWIQSQKESP NMPSAPFYNM VGQPVSPHAA YLPPQSGHTA FSPAPSHPGH LQYPGFVHAL QPTSMTMVQN PQTMIHQPAA
701: PPLAGNLGLD MSAMVPGNQV GAFQHNQLAH LGWTTQSF
001: MVTGSRTSGN RGVGLDDEAK KMIQSIKEVV DSHSDADIYT ALKEANMDAN EAVEKLIHQD PFHEVKRKRD RKKEDTVFVE PANIKKPLEN VTSEVKVRTQ
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSQAYDNHGS YEFPYFSPAM DETVRVQGLP SPHEQGLSAH MLNNAPPSTI
601: PMLQQQQQAS MQQMYPQVHV SHFPNLMPYR QFLSPVYVPQ MPMPGYSGNP AAYAHPSNGN SYVLMPGGGS HLGSNGVKYG IHQQYKPVPT GGPAGFGTYN
701: NPNGYPTNPP NVVGNATGLE DPSRMINKHG NIYVPNPQAE TSEIWMQNPR DLSSLQSPYY NVAGQSPHGA YLSSHTAHQS FNPTAQSSHM QFQGLFHPSQ
801: PGTMANPHHM GPGLSGNVGV GVVPSPPPSQ IGTYQQSQLG HPNWPSNF
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSQAYDNHGS YEFPYFSPAM DETVRVQGLP SPHEQGLSAH MLNNAPPSTI
601: PMLQQQQQAS MQQMYPQVHV SHFPNLMPYR QFLSPVYVPQ MPMPGYSGNP AAYAHPSNGN SYVLMPGGGS HLGSNGVKYG IHQQYKPVPT GGPAGFGTYN
701: NPNGYPTNPP NVVGNATGLE DPSRMINKHG NIYVPNPQAE TSEIWMQNPR DLSSLQSPYY NVAGQSPHGA YLSSHTAHQS FNPTAQSSHM QFQGLFHPSQ
801: PGTMANPHHM GPGLSGNVGV GVVPSPPPSQ IGTYQQSQLG HPNWPSNF
Arabidopsis Description
AT3g13990/MDC16_11 [Source:UniProtKB/TrEMBL;Acc:Q8L7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.