Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029487_P001 | Maize | nucleus | 82.65 | 87.8 |
| Os03t0411000-01 | Rice | nucleus | 58.55 | 59.53 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 12.12 | 37.11 |
| Solyc12g049230.1.1 | Tomato | nucleus | 31.25 | 31.05 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 30.61 | 29.67 |
| KRH47571 | Soybean | nucleus | 30.99 | 28.16 |
| KRH06147 | Soybean | nucleus | 30.36 | 27.67 |
| AT3G13990.1 | Thale cress | nucleus | 28.32 | 26.18 |
| CDY65326 | Canola | nucleus | 28.06 | 25.85 |
| CDX97535 | Canola | nucleus | 28.19 | 25.61 |
| EER88029 | Sorghum | nucleus | 27.68 | 25.26 |
| CDY33258 | Canola | nucleus | 27.93 | 25.14 |
| CDY39087 | Canola | nucleus | 27.81 | 24.97 |
| Bra027380.1-P | Field mustard | nucleus | 28.44 | 24.72 |
| Bra021524.1-P | Field mustard | nucleus | 27.42 | 24.68 |
| KXG24955 | Sorghum | nucleus | 15.43 | 14.88 |
| KXG22544 | Sorghum | nucleus | 13.14 | 12.03 |
| KXG33052 | Sorghum | nucleus | 12.24 | 11.66 |
| KXG22612 | Sorghum | nucleus | 10.46 | 9.86 |
Protein Annotations
| EnsemblPlants:KXG39164 | EnsemblPlantsGene:SORBI_3001G340300 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF36 | ProteinID:KXG39164 | ProteinID:KXG39164.1 |
| SEG:seg | UniParc:UPI00081AB38C | UniProt:A0A1B6QMM6 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:62780633..62786590
Molecular Weight (calculated)
83858.5 Da
IEP (calculated)
7.810
GRAVY (calculated)
-0.550
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRGGPSGF VDYCHNGAKR HDSNKENTSQ QGSNAIRVQK ERKTEWARPG RVFNRNITRG GYSRSSLPGV TQEFRIVKDN RIKLKEVSET LPEASQNGDS
101: SNECAFSNVK DKSSTEKLAA QQHLVTCNTN GHGAAHADNV IKSATQAHDK EVKPSIVIKL EQSEGGQSSL VGSPAVSGKG NQNTVDTAAS GKNNFGVELC
201: CSSSDPIHVP SPGSKSAGTF GAIKREVGVV GARQRPSNSA ATTTSASNGL VKVVSAPKGN NPSKEQQSGL SSVSLRNIRI NLPVPLSNKQ SHHVVSHTKV
301: SPHLEWKPKS VSPSSISHAV TAAPPAAPSP VDDGSKTEVS ALSKKLSHAN VSHEHVIIPE HIRIPDSERT HFIFGSFESE IDPKASLTAS CDIVAKEELN
401: DHSPSSLAAL DSTSTDRPNG RMDNVVSCSP LPQSESAVSV SEHQQSLTEC VEVRTPGVVG EYGTNEMISS KVTHSQPRLQ HQETTQNFKA YEPDSGYGMS
501: FITKVVDGEA AQSIAYSSEA MVLHSVNAYQ LPASTATQQP VPQMFSQQFQ VPHYPNFLPY RQVFSPQFGS PMVVPNYSSN PAFPQLPHTS SYVVMPNGAS
601: QLSANGMKYG SNHQYKQVFQ GAPAGYGYAN HNGYPVSNGV IGGTGAIEDT NMSKYKDNSL YAPNPQVETA DVWFQGHRES ANMPSAPFYN MVGQPVSPHA
701: AYLPPHSGHT AFNPAPSHPA HLQYPSFAHA LHPTSMTMVQ NPQAMVHQPG APPLAGNLGL DMAAMVPGSQ VGAFQQNQWT TQSF
101: SNECAFSNVK DKSSTEKLAA QQHLVTCNTN GHGAAHADNV IKSATQAHDK EVKPSIVIKL EQSEGGQSSL VGSPAVSGKG NQNTVDTAAS GKNNFGVELC
201: CSSSDPIHVP SPGSKSAGTF GAIKREVGVV GARQRPSNSA ATTTSASNGL VKVVSAPKGN NPSKEQQSGL SSVSLRNIRI NLPVPLSNKQ SHHVVSHTKV
301: SPHLEWKPKS VSPSSISHAV TAAPPAAPSP VDDGSKTEVS ALSKKLSHAN VSHEHVIIPE HIRIPDSERT HFIFGSFESE IDPKASLTAS CDIVAKEELN
401: DHSPSSLAAL DSTSTDRPNG RMDNVVSCSP LPQSESAVSV SEHQQSLTEC VEVRTPGVVG EYGTNEMISS KVTHSQPRLQ HQETTQNFKA YEPDSGYGMS
501: FITKVVDGEA AQSIAYSSEA MVLHSVNAYQ LPASTATQQP VPQMFSQQFQ VPHYPNFLPY RQVFSPQFGS PMVVPNYSSN PAFPQLPHTS SYVVMPNGAS
601: QLSANGMKYG SNHQYKQVFQ GAPAGYGYAN HNGYPVSNGV IGGTGAIEDT NMSKYKDNSL YAPNPQVETA DVWFQGHRES ANMPSAPFYN MVGQPVSPHA
701: AYLPPHSGHT AFNPAPSHPA HLQYPSFAHA LHPTSMTMVQ NPQAMVHQPG APPLAGNLGL DMAAMVPGSQ VGAFQQNQWT TQSF
001: MVTGSRTSGN RGVGLDDEAK KMIQSIKEVV DSHSDADIYT ALKEANMDAN EAVEKLIHQD PFHEVKRKRD RKKEDTVFVE PANIKKPLEN VTSEVKVRTQ
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
Arabidopsis Description
AT3g13990/MDC16_11 [Source:UniProtKB/TrEMBL;Acc:Q8L7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.