Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06147 | Soybean | nucleus | 93.97 | 94.3 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 22.71 | 76.56 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 64.54 | 68.85 |
| Solyc12g049230.1.1 | Tomato | nucleus | 53.19 | 58.17 |
| AT3G13990.1 | Thale cress | nucleus | 50.29 | 51.18 |
| CDX97535 | Canola | nucleus | 49.59 | 49.59 |
| CDY65326 | Canola | nucleus | 48.9 | 49.59 |
| CDY33258 | Canola | nucleus | 48.9 | 48.45 |
| CDY39087 | Canola | nucleus | 48.78 | 48.22 |
| Bra021524.1-P | Field mustard | nucleus | 48.67 | 48.22 |
| Bra027380.1-P | Field mustard | nucleus | 49.48 | 47.34 |
| GSMUA_Achr3P07830_001 | Banana | nucleus | 45.08 | 45.82 |
| KRH38470 | Soybean | endoplasmic reticulum | 3.94 | 43.04 |
| GSMUA_Achr3P20190_001 | Banana | nucleus | 34.07 | 37.98 |
| EER88029 | Sorghum | nucleus | 37.31 | 37.49 |
| Os06t0206100-01 | Rice | nucleus | 36.85 | 37.24 |
| TraesCS7D01G167400.1 | Wheat | cytosol, nucleus | 37.08 | 36.95 |
| Zm00001d044979_P010 | Maize | nucleus | 36.38 | 36.85 |
| TraesCS7B01G071400.2 | Wheat | nucleus | 36.96 | 36.71 |
| Zm00001d037122_P009 | Maize | nucleus | 36.38 | 36.51 |
| TraesCS7A01G166800.4 | Wheat | nucleus | 36.96 | 36.0 |
| HORVU7Hr1G034850.1 | Barley | cytosol, nucleus, plastid | 35.92 | 35.96 |
| Os03t0411000-01 | Rice | nucleus | 30.94 | 34.63 |
| Zm00001d029487_P001 | Maize | nucleus | 27.0 | 31.57 |
| KXG39164 | Sorghum | nucleus | 28.16 | 30.99 |
| KRH72609 | Soybean | nucleus | 26.19 | 25.57 |
| KRH16977 | Soybean | nucleus | 25.96 | 25.51 |
| KRH14203 | Soybean | nucleus | 20.74 | 23.16 |
| KRH73929 | Soybean | nucleus | 20.39 | 23.04 |
| KRH11725 | Soybean | nucleus | 18.66 | 19.17 |
| KRH36716 | Soybean | nucleus | 18.19 | 18.74 |
| KRH42968 | Soybean | nucleus | 18.08 | 18.64 |
| KRH59101 | Soybean | nucleus | 17.84 | 18.22 |
| KRG98923 | Soybean | nucleus | 3.94 | 16.83 |
| KRH46046 | Soybean | nucleus | 11.94 | 12.7 |
Protein Annotations
| EMBL:ACUP02004154 | EnsemblPlants:KRH47571 | EnsemblPlantsGene:GLYMA_07G036600 | EntrezGene:100807606 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF28 | PFAM:PF06972 |
| ProteinID:KRH47571 | ProteinID:KRH47571.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023381C8 | UniProt:I1KH95 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:2983274..2992468
Molecular Weight (calculated)
93049.7 Da
IEP (calculated)
9.116
GRAVY (calculated)
-0.761
Length
863 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPGSRTEGG TGTHLLSARV RKTIQSIKEI VGNHSDADIY VALKETNMDP NETTQKLLNQ DPFHEVKRRR DRKKETQNVG NKGQPSADSR RSSENNSGQG
101: MKFNAPSERN VRRTNYSRNT LPGISKEFRV VRDNRVNHIY KEVKPLTQQH STSATEQLNV NTPDKGSSTS TNHRSSGSRN SSLASNGPSD SHARYLKDAV
201: PNIIDRKIAS EDKDKQGMIS NAAGRVQPIK PNNAHQNSAS VASTSSAVGV YSSSTDPVHV PSPDSRSSGV VGAIRREVGV VGVRRQSSDN KAKQSFAPSI
301: SYVVGKDGTS ADSFQSVGAV SKTEQFSQTN VTEPSLSGMP VSRPSLNNQY NNRPHQQLVG HQRVSQQNKE WKPKSSQKPN SNSPGVIGTP KKAAVAAASP
401: PAENSGDIES NTTELQDKLS QVNIYENQNV IIAQHIRVPE TDRCQLTFGT IGTELDSSRL QSKYHIIGAS EKSNEELTAS LTVPAPELST DDVSGSKQVD
501: LRDEHIRSSR SDSPVSGAAS EQQLPDNKDS SNTQNLDNYA NIGLVRDSSP SYAPSEPQQQ DSHDMPGFAA YDPPAGYDIP YFRPTIDETV RGQGLSSPQE
601: ALISHATNNP PASTIAMVQQ QQPPVPQMYP QVHVSHFANL MPYRQFLSPV YVPPMAMPGY SSNPPYPHPT NGSSYLLMPG GGSHLNANNL KYGVQQFKPV
701: PAGSPTGFGN FANPTGYAMI TPGVVGGATA LEDSSRVKYK DNLYVPNPQA ETSEIWLQNP RDLPGMQSTP YYNMPGQTPH AAYMPSHTGH ASFNAAAAQS
801: SHMQFPGMYH TPPQPAAMAS PHHLGPPAIG NNVGVGVAAA APGAQVGAYQ QPQLGHINWT TNF
101: MKFNAPSERN VRRTNYSRNT LPGISKEFRV VRDNRVNHIY KEVKPLTQQH STSATEQLNV NTPDKGSSTS TNHRSSGSRN SSLASNGPSD SHARYLKDAV
201: PNIIDRKIAS EDKDKQGMIS NAAGRVQPIK PNNAHQNSAS VASTSSAVGV YSSSTDPVHV PSPDSRSSGV VGAIRREVGV VGVRRQSSDN KAKQSFAPSI
301: SYVVGKDGTS ADSFQSVGAV SKTEQFSQTN VTEPSLSGMP VSRPSLNNQY NNRPHQQLVG HQRVSQQNKE WKPKSSQKPN SNSPGVIGTP KKAAVAAASP
401: PAENSGDIES NTTELQDKLS QVNIYENQNV IIAQHIRVPE TDRCQLTFGT IGTELDSSRL QSKYHIIGAS EKSNEELTAS LTVPAPELST DDVSGSKQVD
501: LRDEHIRSSR SDSPVSGAAS EQQLPDNKDS SNTQNLDNYA NIGLVRDSSP SYAPSEPQQQ DSHDMPGFAA YDPPAGYDIP YFRPTIDETV RGQGLSSPQE
601: ALISHATNNP PASTIAMVQQ QQPPVPQMYP QVHVSHFANL MPYRQFLSPV YVPPMAMPGY SSNPPYPHPT NGSSYLLMPG GGSHLNANNL KYGVQQFKPV
701: PAGSPTGFGN FANPTGYAMI TPGVVGGATA LEDSSRVKYK DNLYVPNPQA ETSEIWLQNP RDLPGMQSTP YYNMPGQTPH AAYMPSHTGH ASFNAAAAQS
801: SHMQFPGMYH TPPQPAAMAS PHHLGPPAIG NNVGVGVAAA APGAQVGAYQ QPQLGHINWT TNF
001: MVTGSRTSGN RGVGLDDEAK KMIQSIKEVV DSHSDADIYT ALKEANMDAN EAVEKLIHQD PFHEVKRKRD RKKEDTVFVE PANIKKPLEN VTSEVKVRTQ
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
101: PEHNVRRGGY SRNFFPRNAA QRNASPRNPA TGSNKEFRVV RDNRSNPNVD EELKHSSAQS SGSNINKVVA TVNKLGSRGG LGNRNSSGAQ DSTDECNAPA
201: DARLRQAEIR PLHCPVNKEL GGVTLPSTNS VLGVYSSSKD PVHVPSPVSR SSPVGAIKRE VRGGGLGGKP SENVGKDPSV PSFSGSSIRK NGPPNAHRPS
301: SPTSKIDHSR TTARESVMPS GVEKNRSYLN RQRGNRGSQY ARTQQVGGHT KGASQNKEWK PKSNQKPVGH NPGVIGTPTK SQARRPADNS INVETEAVKL
401: QNKLSHVHIS ESQNVIIADH IRVPETDRCQ LTFGSFVQEF NSSRNSESAF EESHSSEEVR ESDRSSPVTC PEASADGPGV LPITIDDHVR VSRSDSPVSA
501: VSEPQLPEQK ETHRSDNLDA YSGIELLNRN GPPYTPLEFE QQQDPPELQK FSAYDNHGSY EFPYFSPAMD ETVRVQGLPS PHEQGLSAHM LNNAPPSTIP
601: MLQQQQQASM QQMYPQVHVS HFPNLMPYRQ FLSPVYVPQM PMPGYSGNPA AYAHPSNGNS YVLMPGGGSH LGSNGVKYGI HQQYKPVPTG GPAGFGTYNN
701: PNGYPTNPPN VVGNATGLED PSRMINKHGN IYVPNPQAET SEIWMQNPRD LSSLQSPYYN VAGQSPHGAY LSSHTAHQSF NPTAQSSHMQ FQGLFHPSQP
801: GTMANPHHMG PGLSGNVGVG VVPSPPPSQI GTYQQSQLGH PNWPSNF
Arabidopsis Description
AT3g13990/MDC16_11 [Source:UniProtKB/TrEMBL;Acc:Q8L7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.