Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72609 | Soybean | nucleus | 94.99 | 94.34 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 62.19 | 60.94 |
| Solyc05g018750.2.1 | Tomato | nucleus | 48.75 | 52.45 |
| Solyc07g045230.2.1 | Tomato | nucleus | 52.28 | 52.4 |
| CDY35953 | Canola | nucleus | 47.27 | 50.92 |
| CDY28028 | Canola | nucleus | 46.81 | 50.87 |
| CDY22126 | Canola | nucleus | 47.27 | 50.67 |
| Bra040021.1-P | Field mustard | nucleus | 47.27 | 50.49 |
| Bra029667.1-P | Field mustard | nucleus | 47.04 | 50.0 |
| AT3G07660.1 | Thale cress | nucleus | 47.61 | 49.7 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 46.81 | 48.99 |
| Os09t0261400-01 | Rice | plasma membrane | 4.44 | 48.75 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 47.95 | 48.0 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 46.01 | 46.87 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 27.9 | 45.88 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 41.23 | 43.93 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 41.12 | 43.81 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 41.0 | 43.69 |
| KRH38470 | Soybean | endoplasmic reticulum | 3.76 | 41.77 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 30.07 | 41.12 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 41.0 | 40.4 |
| KXG24955 | Sorghum | nucleus | 35.19 | 38.01 |
| KRH73929 | Soybean | nucleus | 33.03 | 37.96 |
| KRH14203 | Soybean | nucleus | 33.03 | 37.52 |
| Zm00001d050112_P011 | Maize | nucleus | 34.51 | 35.77 |
| KRH06147 | Soybean | nucleus | 25.63 | 26.16 |
| KRH47571 | Soybean | nucleus | 25.51 | 25.96 |
| KRH59101 | Soybean | nucleus | 22.67 | 23.55 |
| KRH42968 | Soybean | nucleus | 21.53 | 22.58 |
| KRH11725 | Soybean | nucleus | 21.18 | 22.14 |
| KRH36716 | Soybean | nucleus | 20.73 | 21.72 |
| KRG98923 | Soybean | nucleus | 4.21 | 18.32 |
| KRH46046 | Soybean | nucleus | 13.33 | 14.43 |
Protein Annotations
| EMBL:ACUP02009038 | EnsemblPlants:KRH16977 | EnsemblPlantsGene:GLYMA_14G189900 | EntrezGene:100809372 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | PFAM:PF06972 |
| ProteinID:KRH16977 | ProteinID:KRH16977.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI000233AB35 | UniProt:I1MB74 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:45471265..45483220
Molecular Weight (calculated)
92064.4 Da
IEP (calculated)
6.633
GRAVY (calculated)
-0.608
Length
878 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAGFRASI PSSVRRTIQN IKEITGNHSE EDIYAMLKEC SMDPNETTQK LLLQDTFHEV KRKKDRRKEN LNNRESVEPR WRHGTQGRGA RGGRGNFSPH
101: NVSHDAAGSK NSGTGKDSGT HQATEKVVPP LSASQETISK EKSSGTSSVP INANGQTSVT SGTTSGASPS PLSAGTGDRL GSSSCDVNNL NSALPSDSSN
201: KVAAVASGSG SMLSSSNHPA SSSAAHFSSS DPVLVPSDDL WFPGAVGAIR REVGNLHPPG ELSAVNSAEN KLTAASEIGS SPAQGKIQGK SQGAAKNHVT
301: EMSSTSSAVT HSSPSTSRPS SNYTSRSQQL IGPQKAGSNK EWKPKPTNTI NQGSGPASAS EALVSVDPTG QLQSASSALN SEEATSKLQR KLEDLHLPQR
401: QHVILPNHII VPDSEKNKFS FGSLGVALGV NTSYVSGPES EKSSTPVSET SQTIEETVEE QDSSQNAAVT SEVGDYPDHP QSPTNGAENL SSSEVDGSSS
501: AIQEYNESKQ DTALPSGGHQ YSGVHTSPNY SFGFMPPMLG TQLTQFDNSE SQTRDASRLP SFIVHQQLDP ASYYAQFYRT GGDSDGRLSP FSSAGTNTKY
601: NGNVTVLPAP TSQSPQEGGV LSTAGPTPLV TQAAGLMQSS IAVTQQPVPV FRPSGVHISH YPPNYIPYSP YFSPFYVSPP AIHQFMGNGA FPQQPQASTV
701: YPPPPAVAPT GMKYPLPQFK PGANAANPTH LVMPSAYGVY GSSAAGYNHN SAAAAGNSTS NEDLGSSQFK ESNVYIGGQQ SEGSAVWVAA PGRDITSLPT
801: STFYNLPPQG QHVTFAPTQA GHGNFAGMYH PAQAVTAATV HPLLQQSQTM AGAVDMVGPG GNVYQQPQHS QINWPSNY
101: NVSHDAAGSK NSGTGKDSGT HQATEKVVPP LSASQETISK EKSSGTSSVP INANGQTSVT SGTTSGASPS PLSAGTGDRL GSSSCDVNNL NSALPSDSSN
201: KVAAVASGSG SMLSSSNHPA SSSAAHFSSS DPVLVPSDDL WFPGAVGAIR REVGNLHPPG ELSAVNSAEN KLTAASEIGS SPAQGKIQGK SQGAAKNHVT
301: EMSSTSSAVT HSSPSTSRPS SNYTSRSQQL IGPQKAGSNK EWKPKPTNTI NQGSGPASAS EALVSVDPTG QLQSASSALN SEEATSKLQR KLEDLHLPQR
401: QHVILPNHII VPDSEKNKFS FGSLGVALGV NTSYVSGPES EKSSTPVSET SQTIEETVEE QDSSQNAAVT SEVGDYPDHP QSPTNGAENL SSSEVDGSSS
501: AIQEYNESKQ DTALPSGGHQ YSGVHTSPNY SFGFMPPMLG TQLTQFDNSE SQTRDASRLP SFIVHQQLDP ASYYAQFYRT GGDSDGRLSP FSSAGTNTKY
601: NGNVTVLPAP TSQSPQEGGV LSTAGPTPLV TQAAGLMQSS IAVTQQPVPV FRPSGVHISH YPPNYIPYSP YFSPFYVSPP AIHQFMGNGA FPQQPQASTV
701: YPPPPAVAPT GMKYPLPQFK PGANAANPTH LVMPSAYGVY GSSAAGYNHN SAAAAGNSTS NEDLGSSQFK ESNVYIGGQQ SEGSAVWVAA PGRDITSLPT
801: STFYNLPPQG QHVTFAPTQA GHGNFAGMYH PAQAVTAATV HPLLQQSQTM AGAVDMVGPG GNVYQQPQHS QINWPSNY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.