Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59101 | Soybean | nucleus | 93.43 | 92.54 |
| KRH38470 | Soybean | endoplasmic reticulum | 7.17 | 75.95 |
| KRH36716 | Soybean | nucleus | 71.57 | 71.48 |
| KRH11725 | Soybean | nucleus | 71.45 | 71.19 |
| CDY61561 | Canola | cytosol | 4.9 | 62.12 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 62.25 | 59.82 |
| Solyc09g018250.2.1 | Tomato | plastid | 7.53 | 59.43 |
| Solyc02g071180.2.1 | Tomato | nucleus | 51.97 | 52.22 |
| PGSC0003DMT400007972 | Potato | nucleus | 51.85 | 51.91 |
| Bra021900.1-P | Field mustard | nucleus | 48.87 | 49.82 |
| AT1G29370.1 | Thale cress | nucleus | 48.75 | 49.1 |
| Solyc03g005750.2.1 | Tomato | nucleus | 49.34 | 48.99 |
| CDY43334 | Canola | nucleus | 48.03 | 48.91 |
| AT1G29350.1 | Thale cress | nucleus | 48.51 | 48.86 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 12.31 | 48.58 |
| CDX90188 | Canola | nucleus | 47.67 | 48.54 |
| CDY48333 | Canola | nucleus | 47.67 | 48.48 |
| CDY43685 | Canola | nucleus | 47.79 | 48.19 |
| Bra010832.1-P | Field mustard | nucleus | 47.31 | 48.18 |
| CDX99817 | Canola | nucleus | 35.6 | 48.06 |
| CDY15632 | Canola | nucleus | 45.04 | 47.96 |
| Bra022970.1-P | Field mustard | nucleus | 46.36 | 47.96 |
| Bra030134.1-P | Field mustard | nucleus | 44.56 | 47.7 |
| CDX84653 | Canola | nucleus | 46.24 | 47.6 |
| CDX94662 | Canola | nucleus | 45.52 | 47.33 |
| CDY61562 | Canola | nucleus | 42.05 | 46.19 |
| Bra032310.1-P | Field mustard | nucleus | 47.31 | 46.1 |
| Zm00001d035703_P001 | Maize | nucleus | 14.81 | 45.93 |
| Zm00001d017358_P001 | Maize | nucleus | 5.97 | 45.45 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 34.65 | 43.28 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 42.77 | 42.87 |
| CDY61669 | Canola | nucleus | 37.04 | 41.89 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 41.58 | 40.99 |
| Bra013287.1-P | Field mustard | nucleus | 37.99 | 40.77 |
| CDX78828 | Canola | nucleus | 33.69 | 40.4 |
| AT4G18150.1 | Thale cress | nucleus | 35.6 | 39.31 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 42.53 | 39.12 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 40.98 | 39.07 |
| Os05t0566900-01 | Rice | extracellular | 39.07 | 38.38 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 6.93 | 37.91 |
| Os01t0663800-01 | Rice | plasma membrane | 37.87 | 37.25 |
| KXG33052 | Sorghum | nucleus | 36.56 | 37.18 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 37.04 | 36.69 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 36.56 | 36.3 |
| KXG22544 | Sorghum | nucleus | 37.04 | 36.22 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 35.13 | 36.12 |
| Zm00001d011517_P002 | Maize | nucleus | 35.96 | 35.83 |
| Zm00001d043962_P001 | Maize | nucleus | 35.96 | 35.75 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 37.16 | 35.62 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 36.8 | 35.52 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 36.92 | 35.52 |
| Zm00001d009591_P006 | Maize | nucleus | 36.08 | 35.24 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 36.56 | 35.17 |
| Zm00001d039041_P007 | Maize | nucleus | 35.84 | 33.26 |
| Zm00001d039138_P012 | Maize | nucleus | 32.86 | 33.17 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 37.16 | 32.84 |
| KXG22612 | Sorghum | nucleus | 32.62 | 32.81 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 32.38 | 32.07 |
| Zm00001d004950_P001 | Maize | nucleus | 11.83 | 31.94 |
| Os05t0581800-01 | Rice | nucleus | 32.14 | 31.57 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 31.9 | 31.34 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 8.36 | 31.25 |
| KRG98923 | Soybean | nucleus | 7.41 | 30.69 |
| CDY11787 | Canola | nucleus | 26.76 | 30.39 |
| Zm00001d009683_P004 | Maize | nucleus | 30.7 | 30.2 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 29.15 | 28.31 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 28.55 | 28.02 |
| CDY08888 | Canola | nucleus | 18.64 | 27.04 |
| CDX76544 | Canola | nucleus | 17.8 | 26.19 |
| KRH46046 | Soybean | nucleus | 24.25 | 25.03 |
| Bra021022.1-P | Field mustard | nucleus | 18.28 | 24.64 |
| AT5G46380.2 | Thale cress | nucleus | 18.16 | 22.96 |
| KRH16977 | Soybean | nucleus | 22.58 | 21.53 |
| KRH72609 | Soybean | nucleus | 22.58 | 21.38 |
| KRH14203 | Soybean | nucleus | 17.68 | 19.15 |
| KRH73929 | Soybean | nucleus | 16.85 | 18.46 |
| KRH47571 | Soybean | nucleus | 18.64 | 18.08 |
| KRH06147 | Soybean | nucleus | 18.52 | 18.02 |
Protein Annotations
| EMBL:ACUP02004841 | EnsemblPlants:KRH42968 | EnsemblPlantsGene:GLYMA_08G122700 | EntrezGene:100803908 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | PFAM:PF06972 |
| ProteinID:KRH42968 | ProteinID:KRH42968.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI000233842E | UniProt:I1KSL3 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:9451686..9458014
Molecular Weight (calculated)
89917.3 Da
IEP (calculated)
5.309
GRAVY (calculated)
-0.735
Length
837 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKGGGSQK AGIPPASRKM VQSLREIVSN IPEHEIYATL KDCNMDPNEA VSRLLSQDPF HEVKSKREKK KEGKDTTDTR SRGISNASSR GGGGARVGSD
101: RYVGRGDSGL LQGKPVFKKE NGTPAYGGYT APASSSLDNN VNRQLPSYSD SVRVCDGLSS SQHGGLQSPW AANPGQVSMA DIVRMGRPQA KASMPNSSLH
201: SGSHQNDFAL PSASQNNLHS VQVHASKLSE TNNDHGFAID SNVEQTDEWP SIEHQPAVSV SLVVDGHPTS EYHTNSSNSG EANQQLKTHV NEFVAEDDPV
301: ENPDIVGSAK SISEENPEST SVFDGSLYKD INSYQPHRHP FENNEAEDGV SSVATNLEQL NLHSNDQGTE PEEENSSVVI PNHLQLHSAE CLNLSFGSFG
401: SANDASLSGS GPYASRPLKS NLEDTSGAND VSTIGSSDVR NPDYYADEHL TTTSDGNLAH ITGVDAGTYE HSSISQSEAL KSEPPETAQE NQYSFPSSSH
501: EFTYENAQQP DVTYPHSQTS SQIQNLSPFS SVMQAYTNSL PSALLASTVQ TAREDIPYSP FPATQSMPSK YSNIASSIGG PSITMSEALR ANNISTPQPN
601: PQALPGANVA TGPALPQHLA VHPYSQPTLP LGHFANMIGY QFLPQSYTYM PSAFQQAFPG NSTYHQSLAA MLPQYKNSIS VSSLPQSAAV ASGYGFGSST
701: SIPGGNYPLN PPAAPTSTTI GYDDVINSQY KDNNHMISLQ QNENSPMWVH GPSSRTMSAV PANTYYSFQG QNQQPGGFRQ NQQPSQQHFG SLGYPNFYHS
801: QTGISLEHQQ QNPREASLAG SQTQPPKQSP QIWQNSY
101: RYVGRGDSGL LQGKPVFKKE NGTPAYGGYT APASSSLDNN VNRQLPSYSD SVRVCDGLSS SQHGGLQSPW AANPGQVSMA DIVRMGRPQA KASMPNSSLH
201: SGSHQNDFAL PSASQNNLHS VQVHASKLSE TNNDHGFAID SNVEQTDEWP SIEHQPAVSV SLVVDGHPTS EYHTNSSNSG EANQQLKTHV NEFVAEDDPV
301: ENPDIVGSAK SISEENPEST SVFDGSLYKD INSYQPHRHP FENNEAEDGV SSVATNLEQL NLHSNDQGTE PEEENSSVVI PNHLQLHSAE CLNLSFGSFG
401: SANDASLSGS GPYASRPLKS NLEDTSGAND VSTIGSSDVR NPDYYADEHL TTTSDGNLAH ITGVDAGTYE HSSISQSEAL KSEPPETAQE NQYSFPSSSH
501: EFTYENAQQP DVTYPHSQTS SQIQNLSPFS SVMQAYTNSL PSALLASTVQ TAREDIPYSP FPATQSMPSK YSNIASSIGG PSITMSEALR ANNISTPQPN
601: PQALPGANVA TGPALPQHLA VHPYSQPTLP LGHFANMIGY QFLPQSYTYM PSAFQQAFPG NSTYHQSLAA MLPQYKNSIS VSSLPQSAAV ASGYGFGSST
701: SIPGGNYPLN PPAAPTSTTI GYDDVINSQY KDNNHMISLQ QNENSPMWVH GPSSRTMSAV PANTYYSFQG QNQQPGGFRQ NQQPSQQHFG SLGYPNFYHS
801: QTGISLEHQQ QNPREASLAG SQTQPPKQSP QIWQNSY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
RNA polymerase II degradation factor-like protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q8VZT4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.