Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61669 | Canola | nucleus | 69.0 | 70.68 |
| Bra013287.1-P | Field mustard | nucleus | 70.32 | 68.33 |
| CDX78828 | Canola | nucleus | 62.8 | 68.19 |
| KRH38470 | Soybean | endoplasmic reticulum | 6.07 | 58.23 |
| Solyc09g018250.2.1 | Tomato | plastid | 5.41 | 38.68 |
| AT1G29350.1 | Thale cress | nucleus | 39.97 | 36.46 |
| AT1G29370.1 | Thale cress | nucleus | 39.71 | 36.22 |
| KRH59101 | Soybean | nucleus | 39.97 | 35.86 |
| KRH42968 | Soybean | nucleus | 39.31 | 35.6 |
| KRH36716 | Soybean | nucleus | 39.31 | 35.56 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 40.77 | 35.48 |
| KRH11725 | Soybean | nucleus | 39.31 | 35.48 |
| PGSC0003DMT400007972 | Potato | nucleus | 37.73 | 34.21 |
| Solyc02g071180.2.1 | Tomato | nucleus | 37.47 | 34.09 |
| Solyc03g005750.2.1 | Tomato | nucleus | 37.47 | 33.69 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 9.37 | 33.49 |
| Zm00001d035703_P001 | Maize | nucleus | 10.55 | 29.63 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 31.0 | 28.14 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 31.4 | 28.03 |
| Os05t0566900-01 | Rice | extracellular | 30.61 | 27.23 |
| KXG33052 | Sorghum | nucleus | 29.55 | 27.22 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 32.32 | 26.92 |
| Zm00001d011517_P002 | Maize | nucleus | 29.42 | 26.55 |
| Zm00001d017358_P001 | Maize | nucleus | 3.83 | 26.36 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 28.23 | 26.29 |
| KXG22544 | Sorghum | nucleus | 29.68 | 26.29 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 29.29 | 26.27 |
| Zm00001d009591_P006 | Maize | nucleus | 29.55 | 26.14 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 30.08 | 26.12 |
| Zm00001d043962_P001 | Maize | nucleus | 28.89 | 26.01 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 28.89 | 25.98 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 29.82 | 25.98 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 29.68 | 25.95 |
| Os01t0663800-01 | Rice | plasma membrane | 28.89 | 25.73 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 29.42 | 25.63 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 29.68 | 25.63 |
| Zm00001d039138_P012 | Maize | nucleus | 27.18 | 24.85 |
| KXG22612 | Sorghum | nucleus | 27.18 | 24.76 |
| Zm00001d039041_P007 | Maize | nucleus | 29.42 | 24.72 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 27.57 | 24.53 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 27.31 | 24.5 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 29.82 | 23.86 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 4.75 | 23.53 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 6.86 | 23.21 |
| Os05t0581800-01 | Rice | nucleus | 25.33 | 22.54 |
| AT5G46380.2 | Thale cress | nucleus | 19.66 | 22.51 |
| Zm00001d009683_P004 | Maize | nucleus | 25.2 | 22.44 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 24.93 | 21.93 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 24.14 | 21.45 |
| Zm00001d004950_P001 | Maize | nucleus | 8.71 | 21.29 |
| AT3G13222.1 | Thale cress | nucleus | 13.06 | 17.46 |
| AT1G55820.1 | Thale cress | nucleus | 12.66 | 16.7 |
| AT3G07660.1 | Thale cress | nucleus | 18.07 | 16.29 |
| AT3G13990.1 | Thale cress | nucleus | 15.83 | 14.15 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827540 | ProteinID:AEE84004.1 | ArrayExpress:AT4G18150 | EnsemblPlantsGene:AT4G18150 | RefSeq:AT4G18150 |
| TAIR:AT4G18150 | RefSeq:AT4G18150-TAIR-G | EnsemblPlants:AT4G18150.1 | TAIR:AT4G18150.1 | Unigene:At.54386 | UniProt:F4JQR9 |
| InterPro:GIP1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | RefSeq:NP_193549.5 |
| PFAM:PF06972 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | SUPFAM:SSF46934 | InterPro:UBA-like_sf | UniParc:UPI0001A7B10F |
| SEG:seg | : | : | : | : | : |
Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT4G18150]
Coordinates
chr4:+:10050211..10054031
Molecular Weight (calculated)
83594.8 Da
IEP (calculated)
5.608
GRAVY (calculated)
-0.873
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGSVSN ANGGVPASSR KVIQDLKEIV ECSELEIYAM LVECDMNPDE AVNRLLSQDT FHEVKSKREK KKETKDHADS WTRNVPNRGA RSGNDSYNTS
101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE
201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV
301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN
401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN
501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ
601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA
701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ
101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE
201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV
301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN
401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN
501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ
601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA
701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.