Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G29370.1 | Thale cress | nucleus | 98.68 | 98.68 |
| CDY15632 | Canola | nucleus | 75.45 | 79.77 |
| CDY43334 | Canola | nucleus | 78.58 | 79.44 |
| Bra030134.1-P | Field mustard | nucleus | 74.73 | 79.41 |
| CDX90188 | Canola | nucleus | 78.22 | 79.08 |
| Bra010832.1-P | Field mustard | nucleus | 78.1 | 78.95 |
| CDX94662 | Canola | nucleus | 76.05 | 78.51 |
| CDY48333 | Canola | nucleus | 77.74 | 78.49 |
| CDX99817 | Canola | nucleus | 58.12 | 77.9 |
| Bra032310.1-P | Field mustard | nucleus | 77.5 | 74.97 |
| KRH38470 | Soybean | endoplasmic reticulum | 5.66 | 59.49 |
| Solyc09g018250.2.1 | Tomato | plastid | 7.1 | 55.66 |
| CDY11787 | Canola | nucleus | 46.69 | 52.65 |
| KRH36716 | Soybean | nucleus | 49.34 | 48.93 |
| KRH11725 | Soybean | nucleus | 49.22 | 48.69 |
| KRH42968 | Soybean | nucleus | 48.86 | 48.51 |
| KRH59101 | Soybean | nucleus | 49.1 | 48.28 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 50.06 | 47.76 |
| Solyc02g071180.2.1 | Tomato | nucleus | 46.33 | 46.22 |
| PGSC0003DMT400007972 | Potato | nucleus | 46.09 | 45.81 |
| Solyc03g005750.2.1 | Tomato | nucleus | 44.4 | 43.77 |
| Zm00001d035703_P001 | Maize | nucleus | 14.08 | 43.33 |
| Zm00001d017358_P001 | Maize | nucleus | 5.54 | 41.82 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 10.23 | 40.09 |
| AT4G18150.1 | Thale cress | nucleus | 36.46 | 39.97 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 37.06 | 36.89 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 37.79 | 35.76 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 35.62 | 34.86 |
| KXG33052 | Sorghum | nucleus | 34.42 | 34.75 |
| Os05t0566900-01 | Rice | extracellular | 35.62 | 34.74 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 36.22 | 34.72 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 36.22 | 34.6 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 36.34 | 34.59 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 37.67 | 34.4 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 6.26 | 33.99 |
| KXG22544 | Sorghum | nucleus | 34.78 | 33.76 |
| Zm00001d011517_P002 | Maize | nucleus | 34.06 | 33.69 |
| Zm00001d043962_P001 | Maize | nucleus | 33.69 | 33.25 |
| Os01t0663800-01 | Rice | plasma membrane | 33.81 | 33.02 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 33.33 | 32.78 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 33.81 | 32.3 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 32.73 | 32.27 |
| Zm00001d009591_P006 | Maize | nucleus | 33.21 | 32.21 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 31.53 | 32.19 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 36.1 | 31.68 |
| Zm00001d039041_P007 | Maize | nucleus | 34.18 | 31.49 |
| Zm00001d039138_P012 | Maize | nucleus | 30.69 | 30.76 |
| KXG22612 | Sorghum | nucleus | 30.2 | 30.17 |
| Zm00001d004950_P001 | Maize | nucleus | 11.07 | 29.68 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 29.96 | 29.47 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 29.84 | 29.11 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 7.58 | 28.12 |
| Zm00001d009683_P004 | Maize | nucleus | 28.52 | 27.85 |
| Os05t0581800-01 | Rice | nucleus | 28.16 | 27.46 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 28.16 | 27.15 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 26.71 | 26.03 |
| AT5G46380.2 | Thale cress | nucleus | 19.74 | 24.77 |
| AT3G13222.1 | Thale cress | nucleus | 14.92 | 21.87 |
| AT3G07660.1 | Thale cress | nucleus | 20.58 | 20.33 |
| AT1G55820.1 | Thale cress | nucleus | 13.0 | 18.78 |
| AT3G13990.1 | Thale cress | nucleus | 16.37 | 16.04 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839809 | ProteinID:AEE31075.1 | ArrayExpress:AT1G29350 | EnsemblPlantsGene:AT1G29350 | RefSeq:AT1G29350 |
| TAIR:AT1G29350 | RefSeq:AT1G29350-TAIR-G | EnsemblPlants:AT1G29350.1 | TAIR:AT1G29350.1 | Unigene:At.48244 | UniProt:F4I1G1 |
| InterPro:GIP1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 |
| GO:GO:0005515 | RefSeq:NP_174229.2 | PFAM:PF06972 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | SUPFAM:SSF46934 | InterPro:UBA-like_sf |
| UniParc:UPI0000162F10 | SEG:seg | : | : | : | : |
Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
Coordinates
chr1:-:10268421..10273821
Molecular Weight (calculated)
90884.2 Da
IEP (calculated)
5.729
GRAVY (calculated)
-0.972
Length
831 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.