Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99817 | Canola | nucleus | 48.85 | 58.06 |
| CDX90188 | Canola | nucleus | 60.92 | 54.62 |
| CDY43334 | Canola | nucleus | 60.24 | 54.01 |
| Solyc09g018250.2.1 | Tomato | plastid | 7.33 | 50.94 |
| CDY15632 | Canola | nucleus | 52.24 | 48.98 |
| CDY48333 | Canola | nucleus | 54.27 | 48.6 |
| CDX94662 | Canola | nucleus | 52.92 | 48.45 |
| AT1G29350.1 | Thale cress | nucleus | 52.65 | 46.69 |
| AT1G29370.1 | Thale cress | nucleus | 52.1 | 46.21 |
| CDY61562 | Canola | nucleus | 41.11 | 39.76 |
| CDX84653 | Canola | nucleus | 41.66 | 37.76 |
| CDY43685 | Canola | nucleus | 40.71 | 36.14 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 31.89 | 35.07 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.82 | 30.66 |
| KRH42968 | Soybean | nucleus | 30.39 | 26.76 |
| KRH59101 | Soybean | nucleus | 30.26 | 26.39 |
| KRH36716 | Soybean | nucleus | 29.58 | 26.01 |
| KRH11725 | Soybean | nucleus | 29.58 | 25.95 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 30.12 | 25.49 |
| PGSC0003DMT400007972 | Potato | nucleus | 28.77 | 25.36 |
| Solyc02g071180.2.1 | Tomato | nucleus | 28.49 | 25.21 |
| Solyc03g005750.2.1 | Tomato | nucleus | 27.27 | 23.84 |
| CDY61669 | Canola | nucleus | 23.2 | 23.11 |
| CDX78828 | Canola | nucleus | 21.57 | 22.78 |
| Zm00001d017358_P001 | Maize | nucleus | 3.26 | 21.82 |
| Zm00001d035703_P001 | Maize | nucleus | 7.87 | 21.48 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 6.38 | 20.98 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 23.74 | 19.93 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 22.39 | 19.76 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 3.93 | 18.95 |
| KXG33052 | Sorghum | nucleus | 20.62 | 18.47 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 22.8 | 18.46 |
| CDY61561 | Canola | cytosol | 1.63 | 18.18 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 21.03 | 17.88 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 21.03 | 17.82 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 21.03 | 17.75 |
| Zm00001d043962_P001 | Maize | nucleus | 20.22 | 17.7 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 20.22 | 17.55 |
| Zm00001d011517_P002 | Maize | nucleus | 19.95 | 17.5 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 20.62 | 17.47 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 19.95 | 17.44 |
| Os01t0663800-01 | Rice | plasma membrane | 20.08 | 17.39 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 19.81 | 17.28 |
| Os05t0566900-01 | Rice | extracellular | 19.67 | 17.02 |
| KXG22544 | Sorghum | nucleus | 19.54 | 16.82 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 18.32 | 16.58 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 21.03 | 16.37 |
| Zm00001d039138_P012 | Maize | nucleus | 17.77 | 15.8 |
| Zm00001d009591_P006 | Maize | nucleus | 18.32 | 15.75 |
| Zm00001d039041_P007 | Maize | nucleus | 19.27 | 15.74 |
| KXG22612 | Sorghum | nucleus | 17.64 | 15.62 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 17.5 | 15.27 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 17.64 | 15.08 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 17.1 | 14.79 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 16.82 | 14.54 |
| Zm00001d009683_P004 | Maize | nucleus | 16.69 | 14.45 |
| Os05t0581800-01 | Rice | nucleus | 16.28 | 14.08 |
| Zm00001d004950_P001 | Maize | nucleus | 5.56 | 13.23 |
| CDY08888 | Canola | nucleus | 10.31 | 13.17 |
| CDY72379 | Canola | cytosol, nucleus, plastid | 2.31 | 12.88 |
| CDX76544 | Canola | nucleus | 9.63 | 12.48 |
| CDY43361 | Canola | nucleus | 8.28 | 10.54 |
| CDY35953 | Canola | nucleus | 11.26 | 10.18 |
| CDY28028 | Canola | nucleus | 11.13 | 10.15 |
| CDY22126 | Canola | nucleus | 11.26 | 10.13 |
| CDY53764 | Canola | extracellular, vacuole | 5.83 | 9.91 |
| CDY24202 | Canola | nucleus | 7.46 | 9.75 |
| KRH38470 | Soybean | endoplasmic reticulum | 0.95 | 8.86 |
| CDY65326 | Canola | nucleus | 9.23 | 7.99 |
| CDX97535 | Canola | nucleus | 9.23 | 7.88 |
| CDY53767 | Canola | nucleus | 6.51 | 7.8 |
| CDY33258 | Canola | nucleus | 9.09 | 7.69 |
| CDY39087 | Canola | nucleus | 9.09 | 7.67 |
Protein Annotations
| EnsemblPlants:CDY11787 | EnsemblPlantsGene:GSBRNA2T00050028001 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | ProteinID:CDY11787 | ProteinID:CDY11787.1 |
| SEG:seg | UniParc:UPI0004EF3AF6 | UniProt:A0A078FFL5 | MapMan:35.2 | : | : |
Description
BnaC03g57910DBnaC03g57910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFL5]
Coordinates
chrLK032014:-:443122..453003
Molecular Weight (calculated)
82867.2 Da
IEP (calculated)
6.461
GRAVY (calculated)
-0.757
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKELIIEKK RGRRRNFRLN RNVHRDRLFL RHHTILLSRK KRSFPDSQDR DLPCVTRIPN GIGLGLDPFL IILDCVAVPQ GALQILLDYC AHSSKLWLIL
101: QTQSTISTKR SRLSSTSSPS TISASARTSE SKSRRSRLYI DNNDECVCCS DSVNFQGTLI LLSRKINCRL LLRAREYHHH SLLLDIKVNG LELQARCLWL
201: TLLRGVDHRT RQRNVNVRSE INHEHEANAN HQVPVKDEWP SIEKPLPPIT ASVSVAPPAE SEVCGGTADL QSERVDQHLR DRLENIHIAE SGPSEDLGVD
301: HVQPGLVGNV QEEDSVVSSE SNDIQYTYET QSHPVEHHKD EDEVSSGSAD FQELTVERHD QEASHEEDRP AVVIPKHLLI HTEECSQLSF GSFGGFGSRP
401: LSNNAEETPD VAPHKEHSDA RNAEFYGDER LRSNTVDGSM GHAPAAGNYD DSLESRREVL KQENPETVQE NQYTYAHSEP EYAKQQQLNT AYDASQTNAQ
501: NQMQNLASLS NVDANLVLLS ESCILTVHIG YPHSDPNSLL AQTAQNAREL DLQYSAFAQS VQSRNSENPS LGGQSISMPE ALRGSGIPGT QPMQQNLQVI
601: LLCLRTIHTC HPLSSKHTRS NHVLALQHQQ QQNENSAMWH HGHGSRTMSG VPANTHYNLQ AQQQQQLQQT QQAAAVGYRQ AQQQQQQRYG SYGYSNFYQF
701: QTEMSLERQQ QNPRDGAGAQ VGQQPSDQTQ QLWQNSY
101: QTQSTISTKR SRLSSTSSPS TISASARTSE SKSRRSRLYI DNNDECVCCS DSVNFQGTLI LLSRKINCRL LLRAREYHHH SLLLDIKVNG LELQARCLWL
201: TLLRGVDHRT RQRNVNVRSE INHEHEANAN HQVPVKDEWP SIEKPLPPIT ASVSVAPPAE SEVCGGTADL QSERVDQHLR DRLENIHIAE SGPSEDLGVD
301: HVQPGLVGNV QEEDSVVSSE SNDIQYTYET QSHPVEHHKD EDEVSSGSAD FQELTVERHD QEASHEEDRP AVVIPKHLLI HTEECSQLSF GSFGGFGSRP
401: LSNNAEETPD VAPHKEHSDA RNAEFYGDER LRSNTVDGSM GHAPAAGNYD DSLESRREVL KQENPETVQE NQYTYAHSEP EYAKQQQLNT AYDASQTNAQ
501: NQMQNLASLS NVDANLVLLS ESCILTVHIG YPHSDPNSLL AQTAQNAREL DLQYSAFAQS VQSRNSENPS LGGQSISMPE ALRGSGIPGT QPMQQNLQVI
601: LLCLRTIHTC HPLSSKHTRS NHVLALQHQQ QQNENSAMWH HGHGSRTMSG VPANTHYNLQ AQQQQQLQQT QQAAAVGYRQ AQQQQQQRYG SYGYSNFYQF
701: QTEMSLERQQ QNPRDGAGAQ VGQQPSDQTQ QLWQNSY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.