CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43685	Canola	nucleus	93.58	75.54
CDY61562	Canola	nucleus	76.72	67.45
CDX84653	Canola	nucleus	77.31	63.71
CDX99817	Canola	nucleus	50.0	54.03
CDX90188	Canola	nucleus	60.45	49.27
CDY15632	Canola	nucleus	57.61	49.11
CDY43334	Canola	nucleus	60.15	49.03
CDY48333	Canola	nucleus	59.4	48.36
CDX94662	Canola	nucleus	58.06	48.32
KRH59101	Soybean	nucleus	43.73	34.67
KRH42968	Soybean	nucleus	43.28	34.65
KRH36716	Soybean	nucleus	42.39	33.89
KRH11725	Soybean	nucleus	42.09	33.57
VIT_10s0003g02740.t01	Wine grape	nucleus	42.54	32.72
CDY11787	Canola	nucleus	35.07	31.89
Solyc02g071180.2.1	Tomato	nucleus	39.1	31.45
PGSC0003DMT400007972	Potato	nucleus	38.96	31.22
Solyc03g005750.2.1	Tomato	nucleus	39.25	31.2
Zm00001d015193_P001	Maize	nucleus, plastid	9.7	29.02
CDY61669	Canola	nucleus	31.64	28.65
CDX78828	Canola	nucleus	28.21	27.08
GSMUA_Achr7P25510_001	Banana	nucleus	32.39	25.99
Zm00001d035703_P001	Maize	nucleus	10.3	25.56
Os05t0566900-01	Rice	extracellular	31.49	24.77
GSMUA_Achr3P31170_001	Banana	nucleus	32.24	24.6
Zm00001d017358_P001	Maize	nucleus	4.03	24.55
GSMUA_Achr4P14940_001	Banana	nucleus	30.75	24.26
KXG33052	Sorghum	nucleus	29.7	24.18
TraesCS1A01G403900.1	Wheat	nucleus	31.19	24.11
TraesCS1D01G411700.1	Wheat	nucleus	31.19	24.02
TraesCS1B01G433400.1	Wheat	nucleus	31.04	23.83
GSMUA_Achr4P07880_001	Banana	nucleus	32.24	23.74
KXG22544	Sorghum	nucleus	30.15	23.6
Zm00001d011517_P002	Maize	nucleus	29.1	23.21
Zm00001d039041_P007	Maize	nucleus	30.45	22.62
Zm00001d009591_P006	Maize	nucleus	28.51	22.29
Zm00001d043962_P001	Maize	nucleus	27.91	22.21
Os01t0663800-01	Rice	plasma membrane	28.06	22.09
HORVU1Hr1G089280.1	Barley	nucleus	31.19	22.07
TraesCS3B01G269500.1	Wheat	nucleus	27.76	22.01
TraesCS3D01G241600.2	Wheat	nucleus	27.16	21.59
HORVU3Hr1G060080.3	Barley	cytosol, nucleus, vacuole	27.91	21.49
Zm00001d039138_P012	Maize	nucleus	26.12	21.11
Zm00001d004950_P001	Maize	nucleus	9.7	20.97
TraesCS3A01G241400.3	Wheat	nucleus	25.22	20.76
KXG22612	Sorghum	nucleus	25.37	20.43
TraesCS1A01G420300.1	Wheat	nucleus	24.63	19.53
TraesCS1D01G428100.1	Wheat	nucleus	24.78	19.48
TraesCS1B01G450700.1	Wheat	nucleus	24.63	19.34
Zm00001d009683_P004	Maize	nucleus	24.33	19.15
HORVU1Hr1G091730.18	Barley	mitochondrion	24.63	19.14
Os05t0581800-01	Rice	nucleus	24.33	19.13
Zm00001d035814_P001	Maize	cytosol, mitochondrion, nucleus, plastid, vacuole	4.18	18.3
CDY08888	Canola	nucleus	14.93	17.33
CDX76544	Canola	nucleus	13.73	16.17
CDY24202	Canola	nucleus	11.04	13.12
CDY28028	Canola	nucleus	15.52	12.87
CDY22126	Canola	nucleus	15.67	12.82
CDY35953	Canola	nucleus	15.37	12.64
CDY43361	Canola	nucleus	10.9	12.61
VIT_19s0014g03260.t01	Wine grape	nucleus	3.43	10.85
CDY61561	Canola	cytosol	1.04	10.61
CDY65326	Canola	nucleus	13.13	10.34
CDX97535	Canola	nucleus	13.13	10.2
CDY33258	Canola	nucleus	12.24	9.41
CDY39087	Canola	nucleus	12.24	9.39
CDY53764	Canola	extracellular, vacuole	5.97	9.22
CDY53767	Canola	nucleus	8.36	9.11
KRH38470	Soybean	endoplasmic reticulum	0.45	3.8
Solyc09g018250.2.1	Tomato	plastid	0.3	1.89
CDY72379	Canola	cytosol, nucleus, plastid	0.3	1.52

Protein Annotations

EnsemblPlants:CDY37665	EnsemblPlantsGene:GSBRNA2T00064556001	PANTHER:PTHR12758	PANTHER:PTHR12758:SF20	ProteinID:CDY37665	ProteinID:CDY37665.1
SEG:seg	UniParc:UPI0004EEC0A4	UniProt:A0A078HH50	MapMan:35.2	:	:

Description

BnaA04g20030DBnaA04g20030D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078HH50]

Coordinates

chrLK032406:+:3..4198

Molecular Weight (calculated)

72797.5 Da

IEP (calculated)

4.551

GRAVY (calculated)

-0.827

Length

670 amino acids

Sequence
(BLAST)

001: CLSVRDIQDS RPRGYSNNYN RGTRGGSDRY GGPRRTGASS FNSSESGKTT NKRESEKQAY GGSFSSTSGA PSHQQIPHSD SVAVDSKTPT VSSGGGISSS
101: QPVSVQQPAW FGAAGQRSMA DIVKMGRPHT KTTNSQKNVS VVNQEHETVK DQWPSIEKPM AASTSSVSVA PTEPVICNGP ADFQSSGGDQ QVKGHLEDTH
201: LTENGPFGNL GRDHVQADTV AGGVVPEDES EVSSEVDDDD TYEHQTQNHP VEHQKDEDNV SSVAANLQEL SIENHDKYTS HEENRPAVLI PDHLLIYSEE
301: CSQLSFGSFG SRPLNNNLEE ASDVAPPMER ADARHAPFIT DFPFLNSFFL NTEFYGDEQL GSTSHGNMVH ASTAENYDDS TEPQQEVLLP ENPETAHTQN
401: QYSFAQSDQE YAYESSKQQT NTAFDASQTS MQNQIASLTD VMQGYSNATP NTLLAQTAQN ARELELQYST FPGGQSMPSR SNDYSLNDQS ISMPEALRDG
501: GGIQTSQPSQ QQNLPGANIA TGPALPQGPQ QLPMHPYSQH TVPLTHFANM ISYPLMPQGY PYMPSAFQQA FSGNSSYHQS PAALLPQYKN NISPSSLPQS
601: APISSPYGFG NSSNVGAGNF SLNQQQQQQQ AAPTGATLSY EDVMSLQYKQ NSHLLSLQQQ QQQQQQQVCF

Best Arabidopsis Sequence Match ( AT1G29350.1 )
(BLAST)

001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y

Arabidopsis Description

Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.