Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G241600.2 | Wheat | nucleus | 97.17 | 93.83 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 96.93 | 93.37 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 92.51 | 86.55 |
| Zm00001d035703_P001 | Maize | nucleus | 23.34 | 70.37 |
| KXG33052 | Sorghum | nucleus | 69.29 | 68.53 |
| Zm00001d017358_P001 | Maize | nucleus | 9.21 | 68.18 |
| Os01t0663800-01 | Rice | plasma membrane | 70.27 | 67.22 |
| Zm00001d043962_P001 | Maize | nucleus | 69.41 | 67.1 |
| Zm00001d011517_P002 | Maize | nucleus | 68.18 | 66.07 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 59.34 | 55.71 |
| KRH38470 | Soybean | endoplasmic reticulum | 5.41 | 55.7 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 10.07 | 53.59 |
| Zm00001d004950_P001 | Maize | nucleus | 18.92 | 49.68 |
| CDY61561 | Canola | cytosol | 3.69 | 45.45 |
| Solyc09g018250.2.1 | Tomato | plastid | 5.9 | 45.28 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 43.0 | 41.92 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 41.52 | 39.81 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 40.79 | 37.81 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 42.14 | 37.69 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 39.8 | 37.2 |
| PGSC0003DMT400007972 | Potato | nucleus | 37.35 | 36.36 |
| Solyc02g071180.2.1 | Tomato | nucleus | 36.85 | 36.01 |
| KRH59101 | Soybean | nucleus | 36.73 | 35.38 |
| KRH42968 | Soybean | nucleus | 36.12 | 35.13 |
| KRH36716 | Soybean | nucleus | 36.0 | 34.96 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 9.09 | 34.91 |
| Solyc03g005750.2.1 | Tomato | nucleus | 35.63 | 34.4 |
| KRH11725 | Soybean | nucleus | 35.38 | 34.29 |
| CDY48333 | Canola | nucleus | 32.8 | 32.44 |
| CDY43334 | Canola | nucleus | 32.31 | 32.0 |
| Bra030134.1-P | Field mustard | nucleus | 30.71 | 31.97 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 33.17 | 31.95 |
| AT1G29370.1 | Thale cress | nucleus | 32.56 | 31.89 |
| CDY61669 | Canola | nucleus | 28.87 | 31.76 |
| CDX90188 | Canola | nucleus | 32.06 | 31.75 |
| AT1G29350.1 | Thale cress | nucleus | 32.19 | 31.53 |
| CDY15632 | Canola | nucleus | 30.22 | 31.3 |
| Bra010832.1-P | Field mustard | nucleus | 31.57 | 31.27 |
| Bra021900.1-P | Field mustard | nucleus | 31.33 | 31.06 |
| CDX94662 | Canola | nucleus | 30.71 | 31.06 |
| Bra013287.1-P | Field mustard | nucleus | 29.48 | 30.77 |
| CDY43685 | Canola | nucleus | 31.33 | 30.72 |
| CDX99817 | Canola | nucleus | 23.34 | 30.65 |
| Bra032310.1-P | Field mustard | nucleus | 32.31 | 30.62 |
| CDX78828 | Canola | nucleus | 26.17 | 30.52 |
| Bra022970.1-P | Field mustard | nucleus | 30.1 | 30.28 |
| CDX84653 | Canola | nucleus | 29.85 | 29.89 |
| CDY61562 | Canola | nucleus | 27.03 | 28.87 |
| AT4G18150.1 | Thale cress | nucleus | 26.29 | 28.23 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 20.76 | 25.22 |
| CDY08888 | Canola | nucleus | 15.72 | 22.18 |
| CDX76544 | Canola | nucleus | 15.36 | 21.97 |
| Bra021022.1-P | Field mustard | nucleus | 16.09 | 21.09 |
| AT5G46380.2 | Thale cress | nucleus | 15.97 | 19.64 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 19.53 | 19.3 |
| CDY11787 | Canola | nucleus | 16.58 | 18.32 |
| TraesCS7A01G166800.4 | Wheat | nucleus | 15.48 | 14.22 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G241400.3 | EnsemblPlantsGene:TraesCS3A01G241400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF35 | PFAM:PF06972 | SEG:seg | SUPFAM:SSF46934 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:453654373..453676106
Molecular Weight (calculated)
86794.0 Da
IEP (calculated)
5.136
GRAVY (calculated)
-0.681
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGGGRG PAAGPVPASA RKLVQGLKEI VSRSDSEIYA ALRDCGMDPD EAVSRLLSQD TFQEVKNKRD KKKEVNKGTP EPRSRGANNS NSRAARVGTD
101: RTNRSSSVRS VSGGVDNVAS RSSILGPGVP STNSTQKPTV PSSFANNDVV PDGLCGASQS SSGFQQNWCG VPGQMSMADI VKMGRPQGRS SSKSTATADK
201: AFAGQNPSLS NETNHNTKQS ASTVAPTTFD QGFPALPDPI PQFINSNHAS AESHQTHENV WFPQDGPPSQ NQFTAPEPSG GPLSFVASLE SSVLVADAVN
301: LHEKSHTEDN TSIVKQTAIP SERHSEVLHD KVQFGDELLQ NSSTYQSQMH SFADEVEVSN VDVDSAAMNF QHLSLQKEDL AAANSADDNP QLENTDCAHL
401: SFGSFESGAF SGLLPSKVPK YSMEEVPNSD ETPAVDQIDI RNQDYYDNGA LQSSANEDVE TRIDVSGLQY NPPSVSDHVY PNTTQPSIME SQQGNAQAQQ
501: LSHFSSLLAQ QANTLQSNFL GSNLTQHRDF DFSPFLSAQS AMKYNPAVPT TSYPISMQEN LNQGGFSNTQ STQNPPSTSI PSGLPQPQQL SLHPYSQPTL
601: PLGPFASLVG YPYLPQNYYV PPPAFQQAYS SNGPFHQSDG GAAAVPGSAM KYSMPQYKSG LPVTSPPQHS SAVSGYGGFG SSSNIPNFGQ NQSASPATTM
701: GIDEALSSQF KEANHYMALQ QSDNSAMWLH GAAGSRAVSA VPPGNFYGFQ GQSAQGGFRE VQQPSQYGGL GYPSFYQSQN GMQQEHPQNS AEGSLNSSQT
801: PPSQPSHHMW QHSY
101: RTNRSSSVRS VSGGVDNVAS RSSILGPGVP STNSTQKPTV PSSFANNDVV PDGLCGASQS SSGFQQNWCG VPGQMSMADI VKMGRPQGRS SSKSTATADK
201: AFAGQNPSLS NETNHNTKQS ASTVAPTTFD QGFPALPDPI PQFINSNHAS AESHQTHENV WFPQDGPPSQ NQFTAPEPSG GPLSFVASLE SSVLVADAVN
301: LHEKSHTEDN TSIVKQTAIP SERHSEVLHD KVQFGDELLQ NSSTYQSQMH SFADEVEVSN VDVDSAAMNF QHLSLQKEDL AAANSADDNP QLENTDCAHL
401: SFGSFESGAF SGLLPSKVPK YSMEEVPNSD ETPAVDQIDI RNQDYYDNGA LQSSANEDVE TRIDVSGLQY NPPSVSDHVY PNTTQPSIME SQQGNAQAQQ
501: LSHFSSLLAQ QANTLQSNFL GSNLTQHRDF DFSPFLSAQS AMKYNPAVPT TSYPISMQEN LNQGGFSNTQ STQNPPSTSI PSGLPQPQQL SLHPYSQPTL
601: PLGPFASLVG YPYLPQNYYV PPPAFQQAYS SNGPFHQSDG GAAAVPGSAM KYSMPQYKSG LPVTSPPQHS SAVSGYGGFG SSSNIPNFGQ NQSASPATTM
701: GIDEALSSQF KEANHYMALQ QSDNSAMWLH GAAGSRAVSA VPPGNFYGFQ GQSAQGGFRE VQQPSQYGGL GYPSFYQSQN GMQQEHPQNS AEGSLNSSQT
801: PPSQPSHHMW QHSY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.