Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90188 | Canola | nucleus | 97.69 | 97.69 |
| Bra030134.1-P | Field mustard | nucleus | 77.37 | 81.33 |
| Bra032310.1-P | Field mustard | nucleus | 82.48 | 78.93 |
| AT1G29350.1 | Thale cress | nucleus | 78.95 | 78.1 |
| AT1G29370.1 | Thale cress | nucleus | 78.83 | 77.98 |
| Bra022970.1-P | Field mustard | nucleus | 63.63 | 64.65 |
| Bra021900.1-P | Field mustard | nucleus | 64.36 | 64.43 |
| KRH38470 | Soybean | endoplasmic reticulum | 5.96 | 62.03 |
| Solyc09g018250.2.1 | Tomato | plastid | 7.42 | 57.55 |
| KRH36716 | Soybean | nucleus | 48.54 | 47.61 |
| KRH42968 | Soybean | nucleus | 48.18 | 47.31 |
| KRH59101 | Soybean | nucleus | 48.54 | 47.22 |
| KRH11725 | Soybean | nucleus | 48.18 | 47.14 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 48.54 | 45.81 |
| Solyc02g071180.2.1 | Tomato | nucleus | 44.89 | 44.3 |
| PGSC0003DMT400007972 | Potato | nucleus | 44.16 | 43.42 |
| Solyc03g005750.2.1 | Tomato | nucleus | 43.92 | 42.82 |
| Zm00001d035703_P001 | Maize | nucleus | 13.75 | 41.85 |
| Zm00001d017358_P001 | Maize | nucleus | 5.47 | 40.91 |
| Bra013287.1-P | Field mustard | nucleus | 38.56 | 40.64 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 10.34 | 40.09 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 37.1 | 36.53 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 36.98 | 34.62 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 36.37 | 34.49 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 36.5 | 34.48 |
| Os05t0566900-01 | Rice | extracellular | 35.64 | 34.39 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 36.5 | 34.36 |
| KXG33052 | Sorghum | nucleus | 34.06 | 34.02 |
| KXG22544 | Sorghum | nucleus | 35.4 | 34.0 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 6.33 | 33.99 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 35.04 | 33.92 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 37.1 | 33.52 |
| Zm00001d011517_P002 | Maize | nucleus | 33.7 | 32.98 |
| Os01t0663800-01 | Rice | plasma membrane | 33.7 | 32.55 |
| Zm00001d043962_P001 | Maize | nucleus | 33.21 | 32.42 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 32.85 | 31.95 |
| Zm00001d009591_P006 | Maize | nucleus | 33.21 | 31.86 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 32.6 | 31.79 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 31.27 | 31.57 |
| Zm00001d039041_P007 | Maize | nucleus | 34.55 | 31.49 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 33.21 | 31.38 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 36.13 | 31.36 |
| Zm00001d039138_P012 | Maize | nucleus | 29.81 | 29.55 |
| KXG22612 | Sorghum | nucleus | 29.68 | 29.33 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 7.91 | 29.02 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 29.68 | 28.88 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 29.56 | 28.52 |
| Zm00001d004950_P001 | Maize | nucleus | 10.71 | 28.39 |
| Zm00001d009683_P004 | Maize | nucleus | 28.1 | 27.14 |
| Os05t0581800-01 | Rice | nucleus | 27.49 | 26.53 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 27.62 | 26.33 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 26.28 | 25.32 |
| Bra021022.1-P | Field mustard | nucleus | 18.61 | 24.64 |
| Bra039379.1-P | Field mustard | nucleus | 10.1 | 21.17 |
| Bra040021.1-P | Field mustard | nucleus | 18.73 | 18.73 |
| Bra029667.1-P | Field mustard | nucleus | 18.73 | 18.64 |
| Bra038015.1-P | Field mustard | nucleus | 12.04 | 16.26 |
| Bra021524.1-P | Field mustard | nucleus | 17.03 | 16.07 |
| Bra027380.1-P | Field mustard | nucleus | 17.15 | 15.63 |
Protein Annotations
| EnsemblPlants:Bra010832.1 | EnsemblPlants:Bra010832.1-P | EnsemblPlantsGene:Bra010832 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | PFAM:PF06972 | SEG:seg |
| SUPFAM:SSF46934 | UniParc:UPI00025454A9 | UniProt:M4D2X9 | MapMan:35.2 | : | : |
Description
AT1G29350 (E=1e-305) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).
Coordinates
chrA08:+:16688630..16692313
Molecular Weight (calculated)
89984.2 Da
IEP (calculated)
5.496
GRAVY (calculated)
-0.988
Length
822 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGKVIGAR KGNNDIPTGS RKIVQSLKEI VNSPEAEIYA MLKECNMDPN EAVHRLLSQD PFHEVKSKKE KKKETRDVPD YRLRGGHNTY NRGGRGGSDR
101: YGGRSGSTHL SSTDSGNFRG KSTNKRESGT QGYTSSWSSA SGVANHHQTP HSDSVVTENK LPPAASSDGI LSSQPASGHQ TPWFGAQGQM SMADIVKRGI
201: PQNKTTNSQR SEINHGHEVN ANHLVPVKDE WPSIEKPLAP ITSSVSVAPV ESEACGGAAD FQSERGVQQH LRDRLENIQL DESGPSEDLG VDHVQPGSVG
301: NVQEDDSGVS SESNDNQYTY ETQSHPVEHH KDEDEVSSGS ADSQELTIDG HDQEASHEED RPAVVIPKHL LIHTEECSQL SFGSFGGFGS RPLSNNAEET
401: PDVAPQNEHP DARNTEFYGD ERLGSTVNGS MGHAPAAGSY DDSLESRREV LKQENPETVQ ENQYTFAQSE TEYAKQQQQQ QQLNTAYDAS QTNAQNQMQN
501: LASLSNVMAY PHSDPNSLLA QNARELEFQY SNFAQSMQSR NSNNASSLGA QSISMPEALR GSGIPGTQPM QQNLQGANIA TGPALPQQLP QMHPYSQPTM
601: PLAHFANMIS YPLIPQNYPY MPSAFQQTYA GNTSYHQQLA ALLPQYKTNL SSSNLPQSAT APASAYGFGN NSTNVGSAGN FPLNQQQSAP TGYEDVLSSQ
701: YKESNHLLAL QHQQQQQNEN SAMWHHGHGS RTMSGVPANT YYNLQAQQQQ LQQTQQAAAG GYRQAQQQQQ QRYGSHGYPN FYQSQTEMSL ERQQQNPRDG
801: AGAQVGQQPS DQTQQQLWQN SY
101: YGGRSGSTHL SSTDSGNFRG KSTNKRESGT QGYTSSWSSA SGVANHHQTP HSDSVVTENK LPPAASSDGI LSSQPASGHQ TPWFGAQGQM SMADIVKRGI
201: PQNKTTNSQR SEINHGHEVN ANHLVPVKDE WPSIEKPLAP ITSSVSVAPV ESEACGGAAD FQSERGVQQH LRDRLENIQL DESGPSEDLG VDHVQPGSVG
301: NVQEDDSGVS SESNDNQYTY ETQSHPVEHH KDEDEVSSGS ADSQELTIDG HDQEASHEED RPAVVIPKHL LIHTEECSQL SFGSFGGFGS RPLSNNAEET
401: PDVAPQNEHP DARNTEFYGD ERLGSTVNGS MGHAPAAGSY DDSLESRREV LKQENPETVQ ENQYTFAQSE TEYAKQQQQQ QQLNTAYDAS QTNAQNQMQN
501: LASLSNVMAY PHSDPNSLLA QNARELEFQY SNFAQSMQSR NSNNASSLGA QSISMPEALR GSGIPGTQPM QQNLQGANIA TGPALPQQLP QMHPYSQPTM
601: PLAHFANMIS YPLIPQNYPY MPSAFQQTYA GNTSYHQQLA ALLPQYKTNL SSSNLPQSAT APASAYGFGN NSTNVGSAGN FPLNQQQSAP TGYEDVLSSQ
701: YKESNHLLAL QHQQQQQNEN SAMWHHGHGS RTMSGVPANT YYNLQAQQQQ LQQTQQAAAG GYRQAQQQQQ QRYGSHGYPN FYQSQTEMSL ERQQQNPRDG
801: AGAQVGQQPS DQTQQQLWQN SY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.