Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22612 | Sorghum | nucleus | 90.71 | 90.38 |
| Zm00001d009683_P004 | Maize | nucleus | 84.92 | 82.73 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 62.97 | 61.78 |
| Os05t0581800-01 | Rice | nucleus | 62.97 | 61.27 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 62.36 | 60.68 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 58.99 | 56.73 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 57.42 | 55.8 |
| KRH38470 | Soybean | endoplasmic reticulum | 5.31 | 55.7 |
| CDY61561 | Canola | cytosol | 3.86 | 48.48 |
| Zm00001d017358_P001 | Maize | nucleus | 6.39 | 48.18 |
| Zm00001d035703_P001 | Maize | nucleus | 15.08 | 46.3 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 7.24 | 39.22 |
| Solyc09g018250.2.1 | Tomato | plastid | 4.83 | 37.74 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 37.88 | 37.6 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 36.67 | 35.81 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.81 | 34.43 |
| Zm00001d011517_P002 | Maize | nucleus | 34.14 | 33.69 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 35.22 | 33.52 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 36.79 | 33.52 |
| Zm00001d043962_P001 | Maize | nucleus | 33.66 | 33.14 |
| Solyc02g071180.2.1 | Tomato | nucleus | 33.29 | 33.13 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 34.98 | 33.03 |
| KRH42968 | Soybean | nucleus | 33.17 | 32.86 |
| PGSC0003DMT400007972 | Potato | nucleus | 33.05 | 32.78 |
| KRH59101 | Soybean | nucleus | 32.69 | 32.07 |
| Solyc03g005750.2.1 | Tomato | nucleus | 32.57 | 32.03 |
| Zm00001d004950_P001 | Maize | nucleus | 11.94 | 31.94 |
| Zm00001d009591_P006 | Maize | nucleus | 32.69 | 31.62 |
| AT1G29370.1 | Thale cress | nucleus | 31.12 | 31.05 |
| CDY43334 | Canola | nucleus | 30.76 | 31.02 |
| AT1G29350.1 | Thale cress | nucleus | 30.76 | 30.69 |
| KRH11725 | Soybean | nucleus | 31.0 | 30.6 |
| KRH36716 | Soybean | nucleus | 30.88 | 30.55 |
| CDY15632 | Canola | nucleus | 28.71 | 30.28 |
| CDY48333 | Canola | nucleus | 30.04 | 30.26 |
| Bra030134.1-P | Field mustard | nucleus | 28.47 | 30.18 |
| Bra021900.1-P | Field mustard | nucleus | 29.79 | 30.09 |
| CDX90188 | Canola | nucleus | 29.79 | 30.05 |
| Bra010832.1-P | Field mustard | nucleus | 29.55 | 29.81 |
| CDY43685 | Canola | nucleus | 29.79 | 29.76 |
| Zm00001d039041_P007 | Maize | nucleus | 32.21 | 29.6 |
| CDY61669 | Canola | nucleus | 26.18 | 29.32 |
| CDX94662 | Canola | nucleus | 28.11 | 28.94 |
| Bra032310.1-P | Field mustard | nucleus | 29.67 | 28.64 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 7.72 | 28.57 |
| CDX99817 | Canola | nucleus | 21.35 | 28.55 |
| CDX78828 | Canola | nucleus | 23.88 | 28.37 |
| Bra013287.1-P | Field mustard | nucleus | 26.66 | 28.33 |
| Bra022970.1-P | Field mustard | nucleus | 27.14 | 27.81 |
| CDX84653 | Canola | nucleus | 27.14 | 27.68 |
| AT4G18150.1 | Thale cress | nucleus | 24.85 | 27.18 |
| CDY61562 | Canola | nucleus | 24.61 | 26.77 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 21.11 | 26.12 |
| CDX76544 | Canola | nucleus | 16.41 | 23.9 |
| CDY08888 | Canola | nucleus | 16.53 | 23.74 |
| Bra021022.1-P | Field mustard | nucleus | 16.65 | 22.22 |
| AT5G46380.2 | Thale cress | nucleus | 16.53 | 20.69 |
| Zm00001d050118_P001 | Maize | mitochondrion | 9.89 | 19.52 |
| CDY11787 | Canola | nucleus | 15.8 | 17.77 |
| Zm00001d050112_P011 | Maize | nucleus | 14.23 | 13.93 |
| Zm00001d044979_P010 | Maize | nucleus | 14.23 | 13.85 |
| Zm00001d037122_P009 | Maize | nucleus | 13.99 | 13.49 |
| Zm00001d029487_P001 | Maize | nucleus | 9.65 | 10.84 |
Protein Annotations
| EnsemblPlants:Zm00001d039138_P012 | EnsemblPlants:Zm00001d039138_T012 | EnsemblPlantsGene:Zm00001d039138 | EntrezGene:100273818 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF25 | PFAM:PF06972 |
| ProteinID:AQK88817.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI0008445D60 | UniProt:A0A1D6MDT9 | MapMan:35.2 |
Description
GBF-interacting protein 1
Coordinates
chr6:+:170946949..170955490
Molecular Weight (calculated)
88257.0 Da
IEP (calculated)
4.714
GRAVY (calculated)
-0.542
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGRGGGG RQPSYAAPDG ADAAAIPVAS RKMVQSLKGI LADRSEGEIY ATLCDCGMDP DIAVERLISQ DTFHEVRRKR DRKKETKVNH ETRPRPFQKY
101: TYRGYKAVSD RSGRADPTGG FKGPVKKEPE MQAPLNSSAL DVKTSDTTEI FSATINVAQT DAKNTTSQPL SKVQHGWGGI PGRPSMAEIV KMGRPQAKVG
201: SRSVASSTAL PTVGDSVISN TPNLVPEEYN RTVFASEAGH VAADKLPNGA VEVHSLPKDA SAFDMLPSAE GTDVEAPSMS ANAQGSSTPD ANEDDIEKYA
301: NLEEGNTESL ISPGQVSASG KDIQSEYTEV VSHVDEGSIE KTNDFQLNGL PFEHNQTDLN GDVSTATTQF DHLTLHEGPK LSDDNPAVII PDHLQVSNAD
401: CAHLTFGSFV SGTLDSSLTT KPLESHGDAA AVPDDDSIDQ SDGRIHDDEG KVTLATDVNE YVTSAANSNE ENLDITSVQQ SEVTRADFLD VTSNTEYNLT
501: STPDYATSSA PLQDSASQSL QENRQFQNIS PFSSFMQMQN GLLPPAIPPL REFDPAFSLL LTHPPMMHGT MSSSMSNTTV STQPQENANP VGLPNPQLTQ
601: SQQSTSIASG PPLPQHLLHP YAQPTLPLGY ASMIGYPSLP PSYAYLPPAA FQQPYMNSGL FHQAAAAVPT SSVKYPLPQY KSNIALASLP QPGSLLSSYV
701: GGFGTASNMP GNFPLNQSTA AATTTLGFDG TVPSHFKDGN QFISLQQNEN PAMWMHGASS RGMPPLAAST MYGYQGQSHQ AGLRQGQLPS QFGSALGQSQ
801: PGLGPEHRNP SDSNLSGAAQ ANQMWPNTY
101: TYRGYKAVSD RSGRADPTGG FKGPVKKEPE MQAPLNSSAL DVKTSDTTEI FSATINVAQT DAKNTTSQPL SKVQHGWGGI PGRPSMAEIV KMGRPQAKVG
201: SRSVASSTAL PTVGDSVISN TPNLVPEEYN RTVFASEAGH VAADKLPNGA VEVHSLPKDA SAFDMLPSAE GTDVEAPSMS ANAQGSSTPD ANEDDIEKYA
301: NLEEGNTESL ISPGQVSASG KDIQSEYTEV VSHVDEGSIE KTNDFQLNGL PFEHNQTDLN GDVSTATTQF DHLTLHEGPK LSDDNPAVII PDHLQVSNAD
401: CAHLTFGSFV SGTLDSSLTT KPLESHGDAA AVPDDDSIDQ SDGRIHDDEG KVTLATDVNE YVTSAANSNE ENLDITSVQQ SEVTRADFLD VTSNTEYNLT
501: STPDYATSSA PLQDSASQSL QENRQFQNIS PFSSFMQMQN GLLPPAIPPL REFDPAFSLL LTHPPMMHGT MSSSMSNTTV STQPQENANP VGLPNPQLTQ
601: SQQSTSIASG PPLPQHLLHP YAQPTLPLGY ASMIGYPSLP PSYAYLPPAA FQQPYMNSGL FHQAAAAVPT SSVKYPLPQY KSNIALASLP QPGSLLSSYV
701: GGFGTASNMP GNFPLNQSTA AATTTLGFDG TVPSHFKDGN QFISLQQNEN PAMWMHGASS RGMPPLAAST MYGYQGQSHQ AGLRQGQLPS QFGSALGQSQ
801: PGLGPEHRNP SDSNLSGAAQ ANQMWPNTY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.