Factsheet for Zm00001d050118_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015193_P001	Maize	nucleus, plastid	28.57	53.57
Zm00001d009591_P006	Maize	nucleus	68.1	33.37
Zm00001d039041_P007	Maize	nucleus	61.9	28.82
Zm00001d043962_P001	Maize	nucleus	38.81	19.36
Zm00001d011517_P002	Maize	nucleus	38.57	19.29
Zm00001d039138_P012	Maize	nucleus	19.52	9.89
Zm00001d009683_P004	Maize	nucleus	18.81	9.28
KRH46046	Soybean	nucleus	14.52	7.52
Zm00001d004950_P001	Maize	nucleus	4.05	5.48
Zm00001d050112_P011	Maize	nucleus	9.29	4.6
Zm00001d029487_P001	Maize	nucleus	7.86	4.47
Zm00001d044979_P010	Maize	nucleus	8.1	3.99
Zm00001d037122_P009	Maize	nucleus	8.1	3.95
Zm00001d035703_P001	Maize	nucleus	0.24	0.37
Zm00001d035814_P001	Maize	cytosol, mitochondrion, nucleus, plastid, vacuole	0.0	0.0
Zm00001d017358_P001	Maize	nucleus	0.0	0.0
KRG98923	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d050118_P001	EnsemblPlants:Zm00001d050118_T001	EnsemblPlantsGene:Zm00001d050118	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	InterPro:GTP_binding_domain	InterPro:P-loop_NTPase	PANTHER:PTHR12758	PANTHER:PTHR12758:SF35
PFAM:PF01926	ProteinID:AQK51966.1	SEG:seg	SUPFAM:SSF52540	UniParc:UPI0008436C8A	UniProt:A0A1Q0YID6
UniProt:A0A1X8TES1	MapMan:35.1	:	:	:	:

Description

GBF-interacting protein 1

Coordinates

chr4:+:67132382..67136209

Molecular Weight (calculated)

45093.3 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.481

Length

420 amino acids

Sequence
(BLAST)

001: MAASGSRCPR VLVLLQGWVA YIKKQRSCPC VAVNSHSRES IKEIGQAMAS SAVSGGFAIV LKVVQARIRE IKHGDNNCTG TALLVGIPNV GKSAIVNAMH
101: QIGRIAAAEK GKLKHAIVSS HPGETRDIHG YLFSPGGWSR TPGQLSMADI VKMGRSQGKA SSKPMVTAER GYAGQYPSLP STNQNLKQSG SMVSPAELDK
201: GLQPTDNLVQ TLGNSHLELD ENNTFALRST PASERHFEPS DSIPEYNDGI LNNSSSYQPH NYSYTEQEVE DSSADVSAAA ENFQSLSLHN DDFGSGAFSG
301: LLPQKTTDSN VEFLVREDSA TVDPIDARNQ DYYESGAVTS PAEENLEAVL GTNMENVDAP SISQANELSQ DVLDPSILKY DEPSVSSHAY SNMNTPQPST
401: IEDPQGNNQA HTLSHLSNMM

Best Arabidopsis Sequence Match ( AT4G10650.1 )
(BLAST)

001: MATAKTWKIA REIGDAVIKA SRNPNRRWYG PHMAAAVRAI SERIPLVDFV LEIRDARIPL SSEYELLRKF SPLPSKRIIV LNKMELADPL ELKKCIDYFE
101: ERNYLSYAVN SHNKDCVKQL LNFLQSQVRE LHKAGHSGHT TTMMLLGIPN VGKSALSNSL HHIGRISAAE KGKLKHTTVS SQPGDTKDIM SLKIGSHPNV
201: YVLDTPGIFP PNLYDAEICA KLALTGAIPD DIVGELKLAR LFLTILNSSH EYKKWAKLCK SQDLTESLSD ESSKSDAKHK RQYATDHTQD FIVYDVRRVL
301: YETISAFDGN LEDEISMGNL IETQFAALRS VLRVPEEASE FADLRVASKI LNLYRTGRLG HYTLEHVSAL AKSYTYL

Arabidopsis Description

DGP2DAR GTPase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O82497]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.