Factsheet for Zm00001d004950_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017358_P001	Maize	nucleus	33.87	95.45
Zm00001d035814_P001	Maize	cytosol, mitochondrion, nucleus, plastid, vacuole	33.87	68.63
Zm00001d035703_P001	Maize	nucleus	51.29	58.89
Zm00001d043962_P001	Maize	nucleus	66.45	24.47
KXG33052	Sorghum	nucleus	63.55	23.94
Zm00001d011517_P002	Maize	nucleus	63.87	23.57
Solyc09g018250.2.1	Tomato	plastid	7.74	22.64
TraesCS3A01G241400.3	Wheat	nucleus	49.68	18.92
Os01t0663800-01	Rice	plasma membrane	51.61	18.8
TraesCS3D01G241600.2	Wheat	nucleus	49.35	18.15
HORVU3Hr1G060080.3	Barley	cytosol, nucleus, vacuole	50.65	18.05
TraesCS3B01G269500.1	Wheat	nucleus	49.03	17.99
VIT_19s0014g03260.t01	Wine grape	nucleus	11.94	17.45
Zm00001d009591_P006	Maize	nucleus	40.97	14.82
Zm00001d039041_P007	Maize	nucleus	41.94	14.41
GSMUA_Achr7P25510_001	Banana	nucleus	37.74	14.01
GSMUA_Achr4P14940_001	Banana	nucleus	36.77	13.43
CDX99817	Canola	nucleus	26.13	13.06
GSMUA_Achr4P07880_001	Banana	nucleus	36.45	12.42
VIT_10s0003g02740.t01	Wine grape	nucleus	34.84	12.4
GSMUA_Achr3P31170_001	Banana	nucleus	34.84	12.3
KRH11725	Soybean	nucleus	32.58	12.02
Solyc02g071180.2.1	Tomato	nucleus	32.26	12.0
Zm00001d039138_P012	Maize	nucleus	31.94	11.94
Solyc03g005750.2.1	Tomato	nucleus	32.26	11.86
PGSC0003DMT400007972	Potato	nucleus	31.94	11.84
KRH59101	Soybean	nucleus	32.26	11.83
KRH42968	Soybean	nucleus	31.94	11.83
KRH36716	Soybean	nucleus	31.94	11.81
CDY48333	Canola	nucleus	30.0	11.3
AT1G29370.1	Thale cress	nucleus	30.0	11.19
Zm00001d009683_P004	Maize	nucleus	30.65	11.16
AT1G29350.1	Thale cress	nucleus	29.68	11.07
CDY43334	Canola	nucleus	28.71	10.83
Bra010832.1-P	Field mustard	nucleus	28.39	10.71
CDX90188	Canola	nucleus	28.39	10.71
Bra021900.1-P	Field mustard	nucleus	28.06	10.6
Bra032310.1-P	Field mustard	nucleus	29.35	10.59
CDY43685	Canola	nucleus	28.06	10.48
CDY15632	Canola	nucleus	26.13	10.31
CDY61562	Canola	nucleus	25.16	10.24
Bra030134.1-P	Field mustard	nucleus	25.81	10.23
CDX94662	Canola	nucleus	26.13	10.06
CDX78828	Canola	nucleus	22.26	9.89
CDY61669	Canola	nucleus	23.23	9.73
CDY37665	Canola	cytosol, nucleus, plastid	20.97	9.7
Bra022970.1-P	Field mustard	nucleus	23.87	9.15
CDX84653	Canola	nucleus	23.87	9.1
CDY61561	Canola	cytosol	1.94	9.09
Bra013287.1-P	Field mustard	nucleus	22.58	8.97
AT4G18150.1	Thale cress	nucleus	21.29	8.71
KRH38470	Soybean	endoplasmic reticulum	1.94	7.59
AT5G46380.2	Thale cress	nucleus	14.19	6.65
CDY11787	Canola	nucleus	13.23	5.56
Zm00001d050112_P011	Maize	nucleus	14.84	5.43
Zm00001d044979_P010	Maize	nucleus	14.84	5.4
Zm00001d037122_P009	Maize	nucleus	14.84	5.35
Zm00001d029487_P001	Maize	nucleus	12.26	5.15
Zm00001d050118_P001	Maize	mitochondrion	5.48	4.05
Bra021022.1-P	Field mustard	nucleus	8.06	4.03
CDX76544	Canola	nucleus	6.77	3.69
CDY08888	Canola	nucleus	6.45	3.47
Zm00001d015193_P001	Maize	nucleus, plastid	1.94	2.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	UniProt:A0A1D6EI96	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	ProteinID:ONM19835.1	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF328	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0008450193
EnsemblPlantsGene:Zm00001d004950	EnsemblPlants:Zm00001d004950_P001	EnsemblPlants:Zm00001d004950_T001	:	:	:

Description

No Description!

Coordinates

chr2:+:150216929..150219639

Molecular Weight (calculated)

33546.8 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.251

Length

310 amino acids

Sequence
(BLAST)

001: MQQLLSGLDH CHNRGVLHQD IKGANLLLDN NGILKIAYFG LATFFNPKQK QHLTSRVVTL WYEPSELLLG ATNYGAVVDL WSVGCILAEL LSGKPIMLGR
101: TEVEQLHNIF KLCGSPSEEF WANLKLSRAT IFKPQHPYHR CVNDNLGIGV PLHPPLTVNL VGYPYLPQNY YLPSAPFQQA YSSNGPFHQS AAPAVPGAGM
201: KYPMPQYKSS PPASTLPQPS SLSGYGGFGS ANNIPGNFSQ NQGAAAAPTT LGFDEALGTQ FKHPNHYAAL QQSDNSAMWL HGGAGSRTIS AVPPGNFYGF
301: QGQSQHGGFR

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.