Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24955 | Sorghum | nucleus | 81.7 | 85.12 |
| Os09t0261400-01 | Rice | plasma membrane | 5.67 | 60.0 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 30.81 | 48.88 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 46.52 | 47.82 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 46.4 | 47.69 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 46.16 | 47.45 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 46.87 | 44.56 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 39.79 | 40.17 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 41.56 | 40.14 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 37.9 | 37.24 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 37.54 | 35.49 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 26.21 | 34.58 |
| KRH16977 | Soybean | nucleus | 35.77 | 34.51 |
| KRH72609 | Soybean | nucleus | 35.89 | 34.39 |
| Solyc07g045230.2.1 | Tomato | nucleus | 35.06 | 33.9 |
| Solyc05g018750.2.1 | Tomato | nucleus | 32.0 | 33.21 |
| CDY22126 | Canola | nucleus | 31.17 | 32.23 |
| Bra040021.1-P | Field mustard | nucleus | 31.17 | 32.12 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 29.4 | 31.68 |
| AT3G07660.1 | Thale cress | nucleus | 31.29 | 31.51 |
| CDY28028 | Canola | nucleus | 29.52 | 30.94 |
| CDY35953 | Canola | nucleus | 29.28 | 30.43 |
| Bra029667.1-P | Field mustard | nucleus | 29.04 | 29.78 |
| KRH14203 | Soybean | nucleus | 25.38 | 27.81 |
| KRH73929 | Soybean | nucleus | 24.91 | 27.62 |
| PGSC0003DMT400057353 | Potato | nucleus | 23.61 | 25.74 |
| Zm00001d017358_P001 | Maize | nucleus | 2.95 | 22.73 |
| Zm00001d037122_P009 | Maize | nucleus | 20.9 | 20.58 |
| Zm00001d044979_P010 | Maize | nucleus | 20.31 | 20.19 |
| Zm00001d035703_P001 | Maize | nucleus | 5.79 | 18.15 |
| Zm00001d011517_P002 | Maize | nucleus | 17.12 | 17.26 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 3.07 | 16.99 |
| Zm00001d043962_P001 | Maize | nucleus | 16.88 | 16.98 |
| Zm00001d009591_P006 | Maize | nucleus | 16.65 | 16.45 |
| Zm00001d039041_P007 | Maize | nucleus | 17.24 | 16.19 |
| Zm00001d029487_P001 | Maize | nucleus | 12.99 | 14.91 |
| Zm00001d004950_P001 | Maize | nucleus | 5.43 | 14.84 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 3.78 | 14.29 |
| Zm00001d039138_P012 | Maize | nucleus | 13.93 | 14.23 |
| Zm00001d009683_P004 | Maize | nucleus | 13.58 | 13.51 |
| Zm00001d050118_P001 | Maize | mitochondrion | 4.6 | 9.29 |
Protein Annotations
| EnsemblPlants:Zm00001d050112_P011 | EnsemblPlants:Zm00001d050112_T011 | EnsemblPlantsGene:Zm00001d050112 | EntrezGene:103653346 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf |
| PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | PFAM:PF06972 | ProteinID:AQK51944.1 | SEG:seg | SUPFAM:SSF46934 |
| UniParc:UPI00084374C6 | UniProt:A0A1D6PZU7 | MapMan:35.2 | : | : | : |
Description
Putative DUF1296 domain containing family protein
Coordinates
chr4:+:66635305..66651391
Molecular Weight (calculated)
90036.0 Da
IEP (calculated)
6.317
GRAVY (calculated)
-0.403
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGGRVSIP AGARRTIADI KEIAGGHTDE EVYAMLRECN MDPNETVQRL LLEDTFHEVK RKRDKKKEVS KEPSDSRWRP AVQGQGGKNC RNCASRSLSS
101: SNDSAGRSAI SGKENGISLI MGKGSGSTPI TNMNMDVKAS TFMPRKYVVQ ELPIVDDKFK MPACYDQSNL PYYAYIIKLH YFSNSLLSGL CNGPYQSVDP
201: AAVLVSSSSA VGDKSGSTAL ADLTGGLPFK DVVATIDPNS LQPLKPAPPS DPVVVSFLNS HSLGDVGASR QTIGIKKTSV EHKVGRDVST DKGSSEQSVQ
301: SSFRRSSASR PSSSYNSHSE QSQKVIPSKE WKPKLTCLAA SQATEDATVH DNVPLAAADT ITQSAPVPNS AGTEDSLKVD ICLNDLQLSD KQHVIIPDHL
401: QVSESEKYVL SFGSFDVSFQ QTKGSSDPDY VKSSLPKFSS SHELDGNIDE LQSMQRDQNS TSVVQEEAGH VPQPSAKLEK CAPSAMEISS IALMESKDCD
501: DDSATSGDPQ STGTHSAPSY VTYGFAPQSH VNQIEKSESH SQACASYHPT TDADERLSPS LATQAAHKYG NIPVVPTQTG QDQEGNDSPV IISSVSASVA
601: TPAAGVLSAS VAIPQQSVPV FRQPLGVHIP HLPMNYVPYN QYISPFFIPP PTLHPFMGNA TFSQPPSTGV MYPTPGTARV LPPVKFPVPS FKPGANIGSQ
701: ASIGVPGCYG TYGSSPSVYT NNAPVSSGNL AENDNVTSSQ FKENNIYFAG LQTDGLTLWV PTPGRDISAL QVNSFYGLPP PGHQVTYAPQ AGHGPYGGIY
801: HPAHSVAGAT VTPLLQPSHT MAGAVEIVGA PGGVYQHPQA HMNWGSY
101: SNDSAGRSAI SGKENGISLI MGKGSGSTPI TNMNMDVKAS TFMPRKYVVQ ELPIVDDKFK MPACYDQSNL PYYAYIIKLH YFSNSLLSGL CNGPYQSVDP
201: AAVLVSSSSA VGDKSGSTAL ADLTGGLPFK DVVATIDPNS LQPLKPAPPS DPVVVSFLNS HSLGDVGASR QTIGIKKTSV EHKVGRDVST DKGSSEQSVQ
301: SSFRRSSASR PSSSYNSHSE QSQKVIPSKE WKPKLTCLAA SQATEDATVH DNVPLAAADT ITQSAPVPNS AGTEDSLKVD ICLNDLQLSD KQHVIIPDHL
401: QVSESEKYVL SFGSFDVSFQ QTKGSSDPDY VKSSLPKFSS SHELDGNIDE LQSMQRDQNS TSVVQEEAGH VPQPSAKLEK CAPSAMEISS IALMESKDCD
501: DDSATSGDPQ STGTHSAPSY VTYGFAPQSH VNQIEKSESH SQACASYHPT TDADERLSPS LATQAAHKYG NIPVVPTQTG QDQEGNDSPV IISSVSASVA
601: TPAAGVLSAS VAIPQQSVPV FRQPLGVHIP HLPMNYVPYN QYISPFFIPP PTLHPFMGNA TFSQPPSTGV MYPTPGTARV LPPVKFPVPS FKPGANIGSQ
701: ASIGVPGCYG TYGSSPSVYT NNAPVSSGNL AENDNVTSSQ FKENNIYFAG LQTDGLTLWV PTPGRDISAL QVNSFYGLPP PGHQVTYAPQ AGHGPYGGIY
801: HPAHSVAGAT VTPLLQPSHT MAGAVEIVGA PGGVYQHPQA HMNWGSY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.