Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 59.71 | 99.63 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 87.99 | 95.15 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 87.54 | 94.66 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 87.09 | 94.17 |
| Os09t0261400-01 | Rice | plasma membrane | 6.17 | 68.75 |
| KXG24955 | Sorghum | nucleus | 46.02 | 50.43 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 44.56 | 47.32 |
| Zm00001d050112_P011 | Maize | nucleus | 44.56 | 46.87 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 44.67 | 45.38 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 41.19 | 42.58 |
| KRH72609 | Soybean | nucleus | 41.19 | 41.52 |
| KRH16977 | Soybean | nucleus | 40.4 | 41.0 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 29.52 | 40.97 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 40.07 | 39.84 |
| Solyc07g045230.2.1 | Tomato | nucleus | 38.72 | 39.38 |
| Solyc05g018750.2.1 | Tomato | nucleus | 35.8 | 39.09 |
| CDY28028 | Canola | nucleus | 33.89 | 37.38 |
| AT3G07660.1 | Thale cress | nucleus | 35.24 | 37.34 |
| CDY22126 | Canola | nucleus | 34.23 | 37.24 |
| Bra040021.1-P | Field mustard | nucleus | 34.23 | 37.1 |
| CDY35953 | Canola | nucleus | 33.78 | 36.93 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 31.65 | 35.88 |
| Bra029667.1-P | Field mustard | nucleus | 33.22 | 35.84 |
| KRH14203 | Soybean | nucleus | 27.72 | 31.95 |
| KRH73929 | Soybean | nucleus | 26.71 | 31.15 |
| PGSC0003DMT400057353 | Potato | nucleus | 25.36 | 29.09 |
| HORVU7Hr1G034850.1 | Barley | cytosol, nucleus, plastid | 21.21 | 21.93 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 18.41 | 18.85 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 18.18 | 17.11 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 14.25 | 14.73 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G052340.1 | EnsemblPlantsGene:HORVU5Hr1G052340 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | PFAM:PF06972 | SEG:seg |
| SUPFAM:SSF46934 | UniParc:UPI000B47478E | UniProt:A0A287R843 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:409679065..409689500
Molecular Weight (calculated)
87600.9 Da
IEP (calculated)
5.358
GRAVY (calculated)
-0.572
Length
891 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXEAMA AARVSIPAAV RRTIQNIKEI AGNHTDEEVY
101: AALRECDMDP NETAQKLLHQ DTFHEVKRKR EKKKESNKES VDPRWRPGTQ GRGGKGGRGN YSSRQLNNSS DVTVRNALAG KENDLNLSMD KFTSPPPVNP
201: STETKISTSI LSSSGGLSNG PSQPLAPVVK YSQATCHLPP SDSKGPADLK GTEEEVVLDL GSHVNNSSVQ ALGVGTSVSD PLLTPPLQPH SHAGEIVAKH
301: AVRSQRSVGE YKVASDDASA LPKDTPQSSG SSSTVLPSGS RPSSSYSSRS QQPSGSQKAV PNKEWKPKPT NKPAQAEDVT RDDVAVTVEV VPQSVPASTS
401: INKEDISSGL DKRLGDMQLF DKQHVIIPDH LQVTESEKYG LSFGSFGTSF EQAPSFPNDH GSEKSSVLPE YESSQDLEEV AEEPPSSHQS ASSTVEAAAE
501: SGQQQLTAEM TDNISPQEAD NLSSTPKIAE FDESKDTAAS PMPQDSVPNT YSTFAVPPQS QGNQIPLLET SEYQVQQPND FSANYYTQIY RPMADADGHI
601: SPFTAPGVAI KSGNIPVPPS QTGQTPEELN SVMQSSSGPT PLATPTPGAV PSSISIPQQP LPMFRQPVGV HVPHYQPSFI PYNQYISPFY VPPHALHHFM
701: GNAAFPQAPS PGSMYPPVSS AVAPPVKYST TAYKPGANTG SQTYAVTPGA YGTYGSNPSV YTNNNVVASG TSAENGDVSG SQFKENNIYI AGQQSEGSTV
801: WIPAPGRDLS ALQSSSFYGL PPQGQHLAFA PAQAGHGAYG GMYHPAQTLA GAAVHPLLQP SQTIAGAVEM VGPPANGYQQ QQHAQMNWAN Y
101: AALRECDMDP NETAQKLLHQ DTFHEVKRKR EKKKESNKES VDPRWRPGTQ GRGGKGGRGN YSSRQLNNSS DVTVRNALAG KENDLNLSMD KFTSPPPVNP
201: STETKISTSI LSSSGGLSNG PSQPLAPVVK YSQATCHLPP SDSKGPADLK GTEEEVVLDL GSHVNNSSVQ ALGVGTSVSD PLLTPPLQPH SHAGEIVAKH
301: AVRSQRSVGE YKVASDDASA LPKDTPQSSG SSSTVLPSGS RPSSSYSSRS QQPSGSQKAV PNKEWKPKPT NKPAQAEDVT RDDVAVTVEV VPQSVPASTS
401: INKEDISSGL DKRLGDMQLF DKQHVIIPDH LQVTESEKYG LSFGSFGTSF EQAPSFPNDH GSEKSSVLPE YESSQDLEEV AEEPPSSHQS ASSTVEAAAE
501: SGQQQLTAEM TDNISPQEAD NLSSTPKIAE FDESKDTAAS PMPQDSVPNT YSTFAVPPQS QGNQIPLLET SEYQVQQPND FSANYYTQIY RPMADADGHI
601: SPFTAPGVAI KSGNIPVPPS QTGQTPEELN SVMQSSSGPT PLATPTPGAV PSSISIPQQP LPMFRQPVGV HVPHYQPSFI PYNQYISPFY VPPHALHHFM
701: GNAAFPQAPS PGSMYPPVSS AVAPPVKYST TAYKPGANTG SQTYAVTPGA YGTYGSNPSV YTNNNVVASG TSAENGDVSG SQFKENNIYI AGQQSEGSTV
801: WIPAPGRDLS ALQSSSFYGL PPQGQHLAFA PAQAGHGAYG GMYHPAQTLA GAAVHPLLQP SQTIAGAVEM VGPPANGYQQ QQHAQMNWAN Y
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.