Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16977 | Soybean | nucleus | 94.34 | 94.99 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 61.31 | 60.49 |
| Solyc07g045230.2.1 | Tomato | nucleus | 51.81 | 52.28 |
| Solyc05g018750.2.1 | Tomato | nucleus | 48.08 | 52.08 |
| CDY35953 | Canola | nucleus | 46.49 | 50.43 |
| CDY28028 | Canola | nucleus | 45.93 | 50.25 |
| CDY22126 | Canola | nucleus | 46.38 | 50.06 |
| Os09t0261400-01 | Rice | plasma membrane | 4.52 | 50.0 |
| Bra040021.1-P | Field mustard | nucleus | 46.38 | 49.88 |
| Bra029667.1-P | Field mustard | nucleus | 46.27 | 49.52 |
| AT3G07660.1 | Thale cress | nucleus | 47.06 | 49.46 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 46.49 | 48.99 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 47.4 | 47.78 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 46.15 | 47.33 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 28.05 | 46.44 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 41.97 | 45.02 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 41.86 | 44.9 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 41.63 | 44.66 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 29.98 | 41.28 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 41.52 | 41.19 |
| KRH38470 | Soybean | endoplasmic reticulum | 3.62 | 40.51 |
| KXG24955 | Sorghum | nucleus | 34.95 | 38.01 |
| KRH73929 | Soybean | nucleus | 32.24 | 37.3 |
| KRH14203 | Soybean | nucleus | 32.47 | 37.13 |
| Zm00001d050112_P011 | Maize | nucleus | 34.39 | 35.89 |
| KRH06147 | Soybean | nucleus | 25.79 | 26.51 |
| KRH47571 | Soybean | nucleus | 25.57 | 26.19 |
| KRH59101 | Soybean | nucleus | 22.51 | 23.55 |
| KRH42968 | Soybean | nucleus | 21.38 | 22.58 |
| KRH11725 | Soybean | nucleus | 21.04 | 22.14 |
| KRH36716 | Soybean | nucleus | 20.59 | 21.72 |
| KRG98923 | Soybean | nucleus | 4.41 | 19.31 |
| KRH46046 | Soybean | nucleus | 13.35 | 14.55 |
Protein Annotations
| EMBL:ACUP02001223 | EnsemblPlants:KRH72609 | EnsemblPlantsGene:GLYMA_02G222900 | EntrezGene:100794903 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | PFAM:PF06972 |
| ProteinID:KRH72609 | ProteinID:KRH72609.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023BD548 | UniProt:I1JH91 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:41062041..41073203
Molecular Weight (calculated)
92388.9 Da
IEP (calculated)
6.642
GRAVY (calculated)
-0.574
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAGFRASI PSSVRRTIQN IKEITGNHSE EDVYAMLKEC SMDPNETTQK LLLQDTFHEV KRKKDRRKEN LNNRESVEPR WRPGTLGRGA RGGRGNFSPH
101: NASHDAAGSK NSGTGKDNGT PQATEKVVPP LSASQEKISK EKSSGTSSVP INANGPTSVT SGTTSGTSPS PSSAGTGDRL GPSSCDINNL NSALPSDSSN
201: KVATVASGSG SMLSSSNHPA SGPASSSAAH FSSSDPVLVP SDDLWFPGAV GAVGAIRCEV GNLHPPGELR AVSSAENKLT AASETGSSSV QGKIQGKSQG
301: AAKNHVTEMS STSTVTHSSP STSRPSSNYS SRSQQLVGPQ KAGSNKEWKP KPTNTINQGS GPASASEVLV SVDSTGQLQS ASSALNSEEA TSKLQRKLED
401: FHLPQRQHVI LPNHIIVPDS EKNKFSFGSL GVALGVNTSY VSGPESEKSS TPVSETSQTV EETVEEQDSS QNAAVISEVG DYPDHPQSPT NGAENLSSSE
501: VDGSSSAIQE HNESKQDTAL PSGGHQYSGV LTSPNYSFGF VPPVLGTQLT QFDNSESQTR DASRLPSFIV HQQLDPASYY AQFYRTGADS DGRLSPFSSA
601: GANTKYNGNV TVLPAPTSQS PQEGVVLSTT GPTPLVTQAA GPMQSSIAVT QQPVPVFRPS GVHISHYPPN YIPYAPYFSP FYVSPPAIHQ FMGNGAFPQQ
701: PQAGTVYPPP PAVAPTGMKY PLPQFKPGAN AANPTHLVMP SAYGVYGSSA AGYNHNSAAA AGNSTSNEDL GSSQFKESNV YISGQQSEGS AVWMAAPGRD
801: ITSLPTSTFY NLPPQGQHVT FAPTQAGHGT FAGMYHPAQA VTAAAVHPLL QQSQTLAGAV DMVGPGGNVY QQPQHSQINW PSNY
101: NASHDAAGSK NSGTGKDNGT PQATEKVVPP LSASQEKISK EKSSGTSSVP INANGPTSVT SGTTSGTSPS PSSAGTGDRL GPSSCDINNL NSALPSDSSN
201: KVATVASGSG SMLSSSNHPA SGPASSSAAH FSSSDPVLVP SDDLWFPGAV GAVGAIRCEV GNLHPPGELR AVSSAENKLT AASETGSSSV QGKIQGKSQG
301: AAKNHVTEMS STSTVTHSSP STSRPSSNYS SRSQQLVGPQ KAGSNKEWKP KPTNTINQGS GPASASEVLV SVDSTGQLQS ASSALNSEEA TSKLQRKLED
401: FHLPQRQHVI LPNHIIVPDS EKNKFSFGSL GVALGVNTSY VSGPESEKSS TPVSETSQTV EETVEEQDSS QNAAVISEVG DYPDHPQSPT NGAENLSSSE
501: VDGSSSAIQE HNESKQDTAL PSGGHQYSGV LTSPNYSFGF VPPVLGTQLT QFDNSESQTR DASRLPSFIV HQQLDPASYY AQFYRTGADS DGRLSPFSSA
601: GANTKYNGNV TVLPAPTSQS PQEGVVLSTT GPTPLVTQAA GPMQSSIAVT QQPVPVFRPS GVHISHYPPN YIPYAPYFSP FYVSPPAIHQ FMGNGAFPQQ
701: PQAGTVYPPP PAVAPTGMKY PLPQFKPGAN AANPTHLVMP SAYGVYGSSA AGYNHNSAAA AGNSTSNEDL GSSQFKESNV YISGQQSEGS AVWMAAPGRD
801: ITSLPTSTFY NLPPQGQHVT FAPTQAGHGT FAGMYHPAQA VTAAAVHPLL QQSQTLAGAV DMVGPGGNVY QQPQHSQINW PSNY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.