Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G175100.1 | Wheat | nucleus | 96.44 | 62.5 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 96.07 | 62.26 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 95.69 | 62.01 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 99.63 | 59.71 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 43.26 | 35.98 |
| KXG24955 | Sorghum | nucleus | 50.0 | 32.84 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 50.94 | 32.42 |
| Zm00001d050112_P011 | Maize | nucleus | 48.88 | 30.81 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 50.37 | 30.67 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 48.5 | 30.05 |
| KRH72609 | Soybean | nucleus | 46.44 | 28.05 |
| KRH16977 | Soybean | nucleus | 45.88 | 27.9 |
| Solyc05g018750.2.1 | Tomato | nucleus | 42.51 | 27.82 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 46.44 | 27.68 |
| Solyc07g045230.2.1 | Tomato | nucleus | 43.45 | 26.48 |
| CDY22126 | Canola | nucleus | 40.07 | 26.13 |
| CDY28028 | Canola | nucleus | 39.33 | 25.99 |
| Bra040021.1-P | Field mustard | nucleus | 39.89 | 25.91 |
| CDY35953 | Canola | nucleus | 39.51 | 25.89 |
| AT3G07660.1 | Thale cress | nucleus | 40.26 | 25.56 |
| Bra029667.1-P | Field mustard | nucleus | 38.39 | 24.82 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 34.64 | 23.54 |
| KRH14203 | Soybean | nucleus | 29.03 | 20.05 |
| KRH73929 | Soybean | nucleus | 28.28 | 19.76 |
| PGSC0003DMT400057353 | Potato | nucleus | 25.66 | 17.63 |
| HORVU7Hr1G034850.1 | Barley | cytosol, nucleus, plastid | 23.78 | 14.73 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 20.04 | 12.3 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 17.6 | 10.9 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 19.1 | 10.77 |
| Os09t0261400-01 | Rice | plasma membrane | 0.94 | 6.25 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G052360.1 | EnsemblPlantsGene:HORVU5Hr1G052360 | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | SEG:seg | UniParc:UPI000B46A5EF |
| UniProt:A0A287R848 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:409747037..409750852
Molecular Weight (calculated)
56792.2 Da
IEP (calculated)
4.421
GRAVY (calculated)
-0.535
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: ETVPNKEWKP KPTNKPAQAE DVTRDDVAVT VEVVPQSVPA STSINKEDIS SGLDKRLGDM QLFDKQHVII PDHLQVTESE KYGLSFGSFG TSFEQAPSFP
101: NDHGSEKSSV LPEYESSQDL EEVAEEPPSS HQSASSTVEA AAESGQQQLT AEMTDNISPQ EADNLSSTPK IAEFDESKDT AASPMPQDSV PNTYSTFAVP
201: PQSQGNQIPL LETSEYQVQQ PNDFSANYYT QIYRPMADAD GHISPFTAPG VAIKSGNIPV PPSQTGQTPE ELNSVMQSSS GPTPLATPTP GAVPSSISIP
301: QQPLPMFRQP VGVHVPHYQP SFIPYNQYIS PFYVPPHALH HFMGNAAFPQ APSPGSMYPP VSSAVAPPVK YSTTAYKPGA NTGSQTYAVT PGAYGTYGSN
401: PSVYTNNNVV ASGTSAENGD VSGSQFKENN IYIAGQQSEG STVWIPAPGR DLSALQSSSF YGLPPQGQHL AFAPAQAGHG AYGGMYHPAQ TLAGAAVHPL
501: LQPSQTIAGA VEMVGPPANG YQQQQHAQMN WANY
101: NDHGSEKSSV LPEYESSQDL EEVAEEPPSS HQSASSTVEA AAESGQQQLT AEMTDNISPQ EADNLSSTPK IAEFDESKDT AASPMPQDSV PNTYSTFAVP
201: PQSQGNQIPL LETSEYQVQQ PNDFSANYYT QIYRPMADAD GHISPFTAPG VAIKSGNIPV PPSQTGQTPE ELNSVMQSSS GPTPLATPTP GAVPSSISIP
301: QQPLPMFRQP VGVHVPHYQP SFIPYNQYIS PFYVPPHALH HFMGNAAFPQ APSPGSMYPP VSSAVAPPVK YSTTAYKPGA NTGSQTYAVT PGAYGTYGSN
401: PSVYTNNNVV ASGTSAENGD VSGSQFKENN IYIAGQQSEG STVWIPAPGR DLSALQSSSF YGLPPQGQHL AFAPAQAGHG AYGGMYHPAQ TLAGAAVHPL
501: LQPSQTIAGA VEMVGPPANG YQQQQHAQMN WANY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.