Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
- cytosol 1
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 35.98 | 43.26 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 49.07 | 37.54 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 49.07 | 36.54 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 49.22 | 36.03 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 40.65 | 31.67 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 40.5 | 31.55 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 40.5 | 31.55 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 43.15 | 30.92 |
| KRH16977 | Soybean | nucleus | 41.12 | 30.07 |
| KRH72609 | Soybean | nucleus | 41.28 | 29.98 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 40.97 | 29.52 |
| Bra040021.1-P | Field mustard | nucleus | 37.54 | 29.32 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 35.83 | 29.26 |
| CDY22126 | Canola | nucleus | 37.23 | 29.18 |
| CDY28028 | Canola | nucleus | 36.14 | 28.71 |
| CDY35953 | Canola | nucleus | 36.14 | 28.47 |
| AT3G07660.1 | Thale cress | nucleus | 36.92 | 28.18 |
| Solyc07g045230.2.1 | Tomato | nucleus | 38.16 | 27.97 |
| Bra029667.1-P | Field mustard | nucleus | 35.83 | 27.84 |
| KXG24955 | Sorghum | nucleus | 35.05 | 27.68 |
| Solyc05g018750.2.1 | Tomato | nucleus | 34.42 | 27.08 |
| Zm00001d050112_P011 | Maize | nucleus | 34.58 | 26.21 |
| KRH14203 | Soybean | nucleus | 29.44 | 24.45 |
| KRH73929 | Soybean | nucleus | 28.82 | 24.21 |
| PGSC0003DMT400057353 | Potato | nucleus | 24.14 | 19.95 |
| GSMUA_Achr3P07830_001 | Banana | nucleus | 22.9 | 17.31 |
| GSMUA_Achr3P20190_001 | Banana | nucleus | 19.47 | 16.15 |
| GSMUA_Achr1P09430_001 | Banana | cytosol | 2.18 | 15.73 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 18.69 | 14.13 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 18.22 | 14.01 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 18.38 | 13.44 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 17.6 | 12.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P09420_001 | EnsemblPlants:GSMUA_Achr1T09420_001 | EnsemblPlantsGene:GSMUA_Achr1G09420_001 | ncoils:Coil | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 |
| SEG:seg | UniParc:UPI0002963D11 | UniProt:M0RYF1 | MapMan:35.2 | : | : |
Description
Putative protein of unknown function DUF1296 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G09420_001]
Coordinates
chr1:-:7244401..7252470
Molecular Weight (calculated)
67680.0 Da
IEP (calculated)
6.108
GRAVY (calculated)
-0.277
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVPCFHVS SADLVTVPSP VGCSPGKLGT IKHVIQCGET VAEMATNKVV CDAVSPLMGK GSKEMSSSYV NREIQVKSKG SEANQLTGAS EAAFSSSEMG
101: PTGSRSSNYG NHSQQPVGSQ KAVVPNKEWK PKSAHMDHTQ ASGIAGNYDV PMMGNAVSQS VSVPASCSVE LEETISKLEK KLDEMQLSVR QHVIIPDHLQ
201: VTGSERHGLS FGSFDACFNV GFANGDKCDK SATQLSGSLQ ENEENVEQPS SWSDIPLCCI HIASSASQED HPDHIQSPRQ MPENYSSREA GIYGTSATKE
301: YGQAKQEPVI APEDPKIPVV PSISMNSTFG LAPQMFGNQF VPFWSSEPGA CDTTLPNFVV NHLKLVYTTL SSPAAGGYAI EIPFNGSSVI LSTAGSTPLA
401: TQAVGAMQSS GVVSQQPVPI FRQTAGVHLS HYPISYGQYL SPFYVPPPAL HPFLSSVAFP QQPHIGSMYP HPGTAAAAAP VKFSLSQYKP GPNISSSAFI
501: GIPAGYGSSN STPTCYTYSP VVSSGNSTSK EDLNSTQFKE NNIYSSEQQQ SEGSAAWILA PGQDNSSLQT ATAFYGMPPH MTLAPTQTGH GALGGIYHPA
601: SAAVHPLVQQ SQAAAGAVEM VGPAAGVYQQ PQHAQINWTG NY
101: PTGSRSSNYG NHSQQPVGSQ KAVVPNKEWK PKSAHMDHTQ ASGIAGNYDV PMMGNAVSQS VSVPASCSVE LEETISKLEK KLDEMQLSVR QHVIIPDHLQ
201: VTGSERHGLS FGSFDACFNV GFANGDKCDK SATQLSGSLQ ENEENVEQPS SWSDIPLCCI HIASSASQED HPDHIQSPRQ MPENYSSREA GIYGTSATKE
301: YGQAKQEPVI APEDPKIPVV PSISMNSTFG LAPQMFGNQF VPFWSSEPGA CDTTLPNFVV NHLKLVYTTL SSPAAGGYAI EIPFNGSSVI LSTAGSTPLA
401: TQAVGAMQSS GVVSQQPVPI FRQTAGVHLS HYPISYGQYL SPFYVPPPAL HPFLSSVAFP QQPHIGSMYP HPGTAAAAAP VKFSLSQYKP GPNISSSAFI
501: GIPAGYGSSN STPTCYTYSP VVSSGNSTSK EDLNSTQFKE NNIYSSEQQQ SEGSAAWILA PGQDNSSLQT ATAFYGMPPH MTLAPTQTGH GALGGIYHPA
601: SAAVHPLVQQ SQAAAGAVEM VGPAAGVYQQ PQHAQINWTG NY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.