Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14203 | Soybean | nucleus | 91.49 | 90.43 |
| Os09t0261400-01 | Rice | plasma membrane | 4.58 | 43.75 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 44.9 | 43.64 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.32 | 41.77 |
| KRH16977 | Soybean | nucleus | 37.96 | 33.03 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 35.47 | 32.3 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 36.39 | 32.25 |
| KRH72609 | Soybean | nucleus | 37.3 | 32.24 |
| PGSC0003DMT400057353 | Potato | nucleus | 31.81 | 31.27 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 35.86 | 31.24 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 31.54 | 29.25 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 31.28 | 29.0 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 24.21 | 28.82 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 31.02 | 28.76 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 19.76 | 28.28 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 31.15 | 26.71 |
| KXG24955 | Sorghum | nucleus | 28.27 | 26.57 |
| Zm00001d050112_P011 | Maize | nucleus | 27.62 | 24.91 |
| KRH06147 | Soybean | nucleus | 23.17 | 20.58 |
| KRH47571 | Soybean | nucleus | 23.04 | 20.39 |
| KRH36716 | Soybean | nucleus | 19.63 | 17.9 |
| KRH11725 | Soybean | nucleus | 19.37 | 17.62 |
| KRH59101 | Soybean | nucleus | 19.24 | 17.4 |
| KRH42968 | Soybean | nucleus | 18.46 | 16.85 |
| KRH46046 | Soybean | nucleus | 13.22 | 12.45 |
| KRG98923 | Soybean | nucleus | 3.14 | 11.88 |
Protein Annotations
| EMBL:ACUP02001291 | EnsemblPlants:KRH73929 | EnsemblPlantsGene:GLYMA_02G302000 | EntrezGene:100819602 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF30 | PFAM:PF06972 |
| ProteinID:KRH73929 | ProteinID:KRH73929.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023BCEC6 | UniProt:I1JJL0 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:47759797..47766099
Molecular Weight (calculated)
80312.3 Da
IEP (calculated)
7.605
GRAVY (calculated)
-0.624
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGSSSC ARVPIPNNVR KIIQDIREIT GKQHTDDEIY AILRECSMDP NETAQKLLYL DTFHEVRRRR DRKKEGLSSR ASDEPRLKQG GQGRGGRGAS
101: GGYSSNFPDG GGGRNQANRR ENGVNHTAER SHALFTQPVS QKTKTNTTSQ ATRVSAVAPH GAANQSNGKS GHDSAGQSPI VSVPKSTSAA KDTGHQENVQ
201: PQAAVVAAAS SPSQTSGSVT TTDQGKSVSS SDQLQTSVSN VHSSLDLVVA SSVSRNPGVS GAISREVGSN WISAGPNHVK GNKVGHEVND LSASKNEKYG
301: SMNSTSKTNA PQKSNKVENN HLSEPSQLSS PSPNDSLRPS CSSGSQPSLA NIAEVSTSEV CVQSSAELRH VTFPNHFQVP KALKSGLTFG SFDTFGPSEK
401: SNSGAGGDNN ASPALELSDE TATSSNQNAS LTAQGDHLDY PHSSPYWIEK TPATKGNPIT GTDTKVDQPK KEVLLAPEGQ QIPTVQTAQN YGLNFMSTML
501: GTQQVQFEGT EPQSQDASHF PNFVNASSQA VSPSPTPPLQ SSIPVTPQSV SIFRPPYPAN FFPYGHYYPP IYVSPIHQFL NHNGFPQQPS AGNMYLPAAA
601: GIKFPVPQFK AGANTGNTAH IGIPSGSFIT PPVGYAPGQT VNTGSSTGNQ DLAVSQLKES QIYTTGQLSE GSAVWIPAPG QDMSSLQVNS LYNLTPQGQH
701: LTFPPTQAAH GAFAGIFQAG QTVASPSTLL QQSQAVAGPV ENVGPPSGSY QPPQPAQINW NSNF
101: GGYSSNFPDG GGGRNQANRR ENGVNHTAER SHALFTQPVS QKTKTNTTSQ ATRVSAVAPH GAANQSNGKS GHDSAGQSPI VSVPKSTSAA KDTGHQENVQ
201: PQAAVVAAAS SPSQTSGSVT TTDQGKSVSS SDQLQTSVSN VHSSLDLVVA SSVSRNPGVS GAISREVGSN WISAGPNHVK GNKVGHEVND LSASKNEKYG
301: SMNSTSKTNA PQKSNKVENN HLSEPSQLSS PSPNDSLRPS CSSGSQPSLA NIAEVSTSEV CVQSSAELRH VTFPNHFQVP KALKSGLTFG SFDTFGPSEK
401: SNSGAGGDNN ASPALELSDE TATSSNQNAS LTAQGDHLDY PHSSPYWIEK TPATKGNPIT GTDTKVDQPK KEVLLAPEGQ QIPTVQTAQN YGLNFMSTML
501: GTQQVQFEGT EPQSQDASHF PNFVNASSQA VSPSPTPPLQ SSIPVTPQSV SIFRPPYPAN FFPYGHYYPP IYVSPIHQFL NHNGFPQQPS AGNMYLPAAA
601: GIKFPVPQFK AGANTGNTAH IGIPSGSFIT PPVGYAPGQT VNTGSSTGNQ DLAVSQLKES QIYTTGQLSE GSAVWIPAPG QDMSSLQVNS LYNLTPQGQH
701: LTFPPTQAAH GAFAGIFQAG QTVASPSTLL QQSQAVAGPV ENVGPPSGSY QPPQPAQINW NSNF
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.