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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH42968 Soybean nucleus 92.54 93.43
KRH38470 Soybean endoplasmic reticulum 7.1 75.95
KRH36716 Soybean nucleus 72.66 73.27
KRH11725 Soybean nucleus 72.66 73.1
CDY61561 Canola cytosol 4.97 63.64
VIT_10s0003g02740.t01 Wine grape nucleus 61.89 60.05
Solyc09g018250.2.1 Tomato plastid 7.34 58.49
PGSC0003DMT400007972 Potato nucleus 51.95 52.51
Solyc02g071180.2.1 Tomato nucleus 51.72 52.46
Bra021900.1-P Field mustard nucleus 48.64 50.06
Solyc03g005750.2.1 Tomato nucleus 49.59 49.7
AT1G29370.1 Thale cress nucleus 48.52 49.34
AT1G29350.1 Thale cress nucleus 48.28 49.1
CDY43334 Canola nucleus 47.57 48.91
CDX90188 Canola nucleus 47.34 48.66
CDY43685 Canola nucleus 47.69 48.55
Bra010832.1-P Field mustard nucleus 47.22 48.54
CDY48333 Canola nucleus 47.22 48.48
Bra022970.1-P Field mustard nucleus 46.39 48.45
CDY15632 Canola nucleus 44.97 48.35
Bra030134.1-P Field mustard nucleus 44.73 48.34
CDX84653 Canola nucleus 46.04 47.85
VIT_19s0014g03260.t01 Wine grape nucleus 11.95 47.64
CDX99817 Canola nucleus 34.91 47.58
CDX94662 Canola nucleus 45.33 47.58
Zm00001d017358_P001 Maize nucleus 6.15 47.27
CDY61562 Canola nucleus 41.89 46.46
Zm00001d035703_P001 Maize nucleus 14.79 46.3
Bra032310.1-P Field mustard nucleus 46.63 45.87
GSMUA_Achr7P25510_001 Banana nucleus 43.67 44.19
CDY37665 Canola cytosol, nucleus, plastid 34.67 43.73
CDY61669 Canola nucleus 37.4 42.7
GSMUA_Achr4P14940_001 Banana nucleus 41.66 41.46
Bra013287.1-P Field mustard nucleus 38.22 41.41
CDX78828 Canola nucleus 34.08 41.26
AT4G18150.1 Thale cress nucleus 35.86 39.97
GSMUA_Achr3P31170_001 Banana nucleus 41.42 39.86
GSMUA_Achr4P07880_001 Banana nucleus 42.49 39.45
Zm00001d035814_P001 Maize cytosol, mitochondrion, nucleus, plastid, vacuole 7.1 39.22
Os05t0566900-01 Rice extracellular 39.05 38.73
Os01t0663800-01 Rice plasma membrane 38.22 37.96
KXG33052 Sorghum nucleus 36.92 37.91
TraesCS3B01G269500.1 Wheat nucleus 37.04 37.04
TraesCS3A01G241400.3 Wheat nucleus 35.38 36.73
TraesCS3D01G241600.2 Wheat nucleus 36.57 36.65
Zm00001d011517_P002 Maize nucleus 36.21 36.43
Zm00001d043962_P001 Maize nucleus 36.21 36.34
KXG22544 Sorghum nucleus 36.8 36.33
TraesCS1D01G411700.1 Wheat nucleus 37.28 36.21
TraesCS1B01G433400.1 Wheat nucleus 37.4 36.2
TraesCS1A01G403900.1 Wheat nucleus 37.04 36.1
HORVU3Hr1G060080.3 Barley cytosol, nucleus, vacuole 36.8 35.75
Zm00001d009591_P006 Maize nucleus 35.74 35.24
Zm00001d039041_P007 Maize nucleus 35.62 33.37
HORVU1Hr1G089280.1 Barley nucleus 37.4 33.37
Zm00001d039138_P012 Maize nucleus 32.07 32.69
Zm00001d004950_P001 Maize nucleus 11.83 32.26
KXG22612 Sorghum nucleus 31.6 32.09
Zm00001d015193_P001 Maize nucleus, plastid 8.4 31.7
Os05t0581800-01 Rice nucleus 31.12 30.87
TraesCS1A01G420300.1 Wheat nucleus 30.77 30.77
TraesCS1D01G428100.1 Wheat nucleus 30.65 30.4
CDY11787 Canola nucleus 26.39 30.26
Zm00001d009683_P004 Maize nucleus 29.7 29.49
KRG98923 Soybean nucleus 6.98 29.21
CDY08888 Canola nucleus 18.7 27.38
HORVU1Hr1G091730.18 Barley mitochondrion 27.46 26.91
TraesCS1B01G450700.1 Wheat nucleus 27.1 26.85
CDX76544 Canola nucleus 17.99 26.71
KRH46046 Soybean nucleus 24.26 25.28
Bra021022.1-P Field mustard nucleus 18.34 24.96
AT5G46380.2 Thale cress nucleus 18.46 23.57
KRH16977 Soybean nucleus 23.55 22.67
KRH72609 Soybean nucleus 23.55 22.51
KRH14203 Soybean nucleus 18.22 19.92
KRH73929 Soybean nucleus 17.4 19.24
KRH47571 Soybean nucleus 18.22 17.84
KRH06147 Soybean nucleus 18.11 17.79
Protein Annotations
EMBL:ACUP02003299EnsemblPlants:KRH59101EnsemblPlantsGene:GLYMA_05G165300EntrezGene:100776017GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:GIP1InterPro:UBA-like_sfPANTHER:PTHR12758PANTHER:PTHR12758:SF20PFAM:PF06972
ProteinID:KRH59101ProteinID:KRH59101.1SEG:segSUPFAM:SSF46934UniParc:UPI00023C4ABDUniProt:I1K465
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr5:+:35593651..35600917
Molecular Weight (calculated)
90464.9 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.709
Length
845 amino acids
Sequence
(BLAST)
001: MSGKGGGGQK AGIPPASRKM VQSLKEIVSN IPEHEIYATL KDCNMDPNEA VSRLLSQDTF HEVKSKREKK KEGKDTTDSR SRVVSNTSSR GGGARVSADR
101: YVGRGGATQF SSGGDSGLLQ GKPVLKKENG TPAYGGLTAP ASSALDNNVN RQLPSYSDSV RVCDGLSSSQ YGGMQSPWVA NPGQVSMADI VRMGRPQAKA
201: SMHNSSLHSG SHQNVFAPPE ASHNNLHSLQ GHASKVSETN NDRGFAINSN VEQNDEWPLI EHQPAVSVSS VVDDHPTSEY HTNSSNSGEA NQQLKTHVNE
301: FVAEDDPVEN PDNVGSASIS EENPESTSVF DGSTYKDINS YQSHRHPFET NEAEGGVSSV AANLEQLNLH SNDQGTEQEE ENSSVVIPNH LQLHSAECLN
401: LSFGSFGSAN DASLSGSGPY ASRPLKSNLE DTSGANDVST IGSSDVRNPD YYGDEHLTTT SDGNVAHITG VDAGTYEHSS ISQSEALKSE PPETAQENQY
501: SFPSSHEFTY ENAQQPDVTY PHSQTSSQIQ NLSPFSSVMA YTNSLPSALL ASTVQTARED IPYSPFPATQ SMPAKYSNIA SSIGGPTINM SEALRANNIS
601: TPQPNPQALP GANVATGPAL PQHLAVHPYS QPTLPLGHFA NMISYPFLPQ SYTYMPSAFQ QAFPGNSTYH QSLAAMLPQY KNSISVSSLP QSAAAAAVAS
701: GYGFGSSTSI PGGNYPLNPP AAPTSTTIGY DDVINSQFKE NNHIISLQQN ENSPMWVHGP SSRTMSAVPP STYYSFQGQN QQPGGFRQSQ QPSQQHFGSL
801: GYPNFYHSQT GISLEHQQQN PREASLAGSQ SQPPKQSQQI WQNSY
Best Arabidopsis Sequence Match ( AT1G29370.1 )
(BLAST)
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
RNA polymerase II degradation factor-like protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q8VZT4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.