Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G420300.1 | Wheat | nucleus | 63.97 | 64.5 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 63.97 | 63.97 |
| KXG22612 | Sorghum | nucleus | 62.32 | 63.82 |
| Zm00001d039138_P012 | Maize | nucleus | 61.27 | 62.97 |
| Zm00001d009683_P004 | Maize | nucleus | 59.98 | 60.05 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 59.86 | 59.16 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 59.04 | 58.97 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.69 | 50.63 |
| CDY61561 | Canola | cytosol | 3.52 | 45.45 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 36.97 | 37.72 |
| Solyc09g018250.2.1 | Tomato | plastid | 4.58 | 36.79 |
| Os05t0566900-01 | Rice | extracellular | 35.92 | 35.92 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 35.45 | 35.57 |
| Os01t0663800-01 | Rice | plasma membrane | 34.51 | 34.55 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.57 | 34.43 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 35.68 | 33.41 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 33.69 | 32.95 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 33.57 | 32.57 |
| KRH42968 | Soybean | nucleus | 31.57 | 32.14 |
| PGSC0003DMT400007972 | Potato | nucleus | 31.1 | 31.7 |
| Solyc02g071180.2.1 | Tomato | nucleus | 30.99 | 31.69 |
| KRH59101 | Soybean | nucleus | 30.87 | 31.12 |
| Solyc03g005750.2.1 | Tomato | nucleus | 30.28 | 30.61 |
| KRH36716 | Soybean | nucleus | 29.11 | 29.59 |
| KRH11725 | Soybean | nucleus | 29.11 | 29.52 |
| Bra030134.1-P | Field mustard | nucleus | 26.88 | 29.28 |
| CDY15632 | Canola | nucleus | 26.88 | 29.13 |
| CDY48333 | Canola | nucleus | 28.05 | 29.04 |
| Bra021900.1-P | Field mustard | nucleus | 27.82 | 28.87 |
| CDY43334 | Canola | nucleus | 27.46 | 28.47 |
| CDY43685 | Canola | nucleus | 27.7 | 28.43 |
| AT1G29370.1 | Thale cress | nucleus | 27.58 | 28.28 |
| AT1G29350.1 | Thale cress | nucleus | 27.46 | 28.16 |
| CDX99817 | Canola | nucleus | 20.31 | 27.9 |
| CDX90188 | Canola | nucleus | 26.88 | 27.86 |
| CDX94662 | Canola | nucleus | 26.29 | 27.83 |
| Bra032310.1-P | Field mustard | nucleus | 28.05 | 27.82 |
| Bra010832.1-P | Field mustard | nucleus | 26.53 | 27.49 |
| Bra022970.1-P | Field mustard | nucleus | 25.82 | 27.19 |
| CDY61669 | Canola | nucleus | 23.47 | 27.03 |
| CDX84653 | Canola | nucleus | 25.7 | 26.94 |
| Bra013287.1-P | Field mustard | nucleus | 24.53 | 26.79 |
| CDX78828 | Canola | nucleus | 21.83 | 26.65 |
| Os09t0261400-01 | Rice | plasma membrane | 2.46 | 26.25 |
| CDY61562 | Canola | nucleus | 23.36 | 26.12 |
| AT4G18150.1 | Thale cress | nucleus | 22.54 | 25.33 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 19.13 | 24.33 |
| CDX76544 | Canola | nucleus | 15.38 | 23.02 |
| CDY08888 | Canola | nucleus | 15.14 | 22.36 |
| Bra021022.1-P | Field mustard | nucleus | 15.73 | 21.58 |
| AT5G46380.2 | Thale cress | nucleus | 14.79 | 19.03 |
| CDY11787 | Canola | nucleus | 14.08 | 16.28 |
| Os06t0206100-01 | Rice | nucleus | 14.2 | 14.17 |
| Os03t0411000-01 | Rice | nucleus | 10.8 | 11.93 |
Protein Annotations
| EnsemblPlants:Os05t0581800-01 | EnsemblPlantsGene:Os05g0581800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF25 | PFAM:PF06972 | ProteinID:AAU10711.1 | ProteinID:BAF18347.1 |
| ProteinID:BAS95527.1 | ProteinID:BAS95529.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI000042ABBF | UniProt:Q688S7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Protein of unknown function DUF1296 family protein. (Os05t0581800-01);Protein of unknown function DUF1296 domain containing protein. (Os05t0581800-02);Hypothetical conserved gene. (Os05t0581800-03)
Coordinates
chr5:+:28940141..28948356
Molecular Weight (calculated)
89946.0 Da
IEP (calculated)
5.211
GRAVY (calculated)
-0.573
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGGRGGG GGGGGRVPFY AAAAAAEPAS RKLVQGLKGI LTDRSEAEIY ATLLDCGMDP DVAVERLISQ DPFHEVRRKR DKKKEIKAPQ ETRPRPFYKP
101: AFRGSKTGGD STGSGKGPTK KETELHSLPK SSVSDSVKES NPTEKISAAD HATINDSLIL SSGQADAKST PLQPPSQVKH GWGGMPGRPS MADIVKMGKP
201: QAKPVRSVAC NTGMPTIGGS VISNATNHTS KDSQDLVLPS QVNSVATDRI PNGTNEVSPA SNDSSIDVLP PREGLEVPES VATVKPGSST ADVYKDEVEE
301: DMDSDKNKDM SASNADDRTS SGPYPASSKE VHSEHTQIAT HHNDLIVETE DSQSDGNAFE NNRVADSEGN MSATDKQFEQ LILHEEKKSK SSEDNPAVII
401: PDHLQVSNAD CAHLTFGSFV SGTLDAPVSL KTANGDEEVA AVSDNHSIDQ SDVRIHEYEN KDTVAPAADE HVASSTKSDT ENVDVAPVQQ PELRTADLID
501: VPNNTMYNNL STSDYATPSA VQPDSSAHIY LQEHRQLQNI SPLSSFMQGN IPNGLLPPAL PPLRDFDPAF SLLLTNPPLA TMVHGTTSSS MGNATTVSTQ
601: PQEIVNPGAS SNPQLNQSQP STSTSIASGP PLPQHLTLHP YAQATLPLGY ASMIGYPSLA PSYTYLPPPA FQQPYMNSGL FHQAAAAVPN SSVKYPLPQY
701: KGNVSLASLP QQASLLSSYV GGFGAASSMP GNFALNQSTP SATAAPGFDG TVPAQYKEGN QFVSLQQSEN AAMWMHGASS RTMPPLAANA LYYQGQQGHQ
801: GGLRQGQLPS QFGAPLAPTQ PGLGHEHRNP SDGNLSSAAA AAQANQMWPN SY
101: AFRGSKTGGD STGSGKGPTK KETELHSLPK SSVSDSVKES NPTEKISAAD HATINDSLIL SSGQADAKST PLQPPSQVKH GWGGMPGRPS MADIVKMGKP
201: QAKPVRSVAC NTGMPTIGGS VISNATNHTS KDSQDLVLPS QVNSVATDRI PNGTNEVSPA SNDSSIDVLP PREGLEVPES VATVKPGSST ADVYKDEVEE
301: DMDSDKNKDM SASNADDRTS SGPYPASSKE VHSEHTQIAT HHNDLIVETE DSQSDGNAFE NNRVADSEGN MSATDKQFEQ LILHEEKKSK SSEDNPAVII
401: PDHLQVSNAD CAHLTFGSFV SGTLDAPVSL KTANGDEEVA AVSDNHSIDQ SDVRIHEYEN KDTVAPAADE HVASSTKSDT ENVDVAPVQQ PELRTADLID
501: VPNNTMYNNL STSDYATPSA VQPDSSAHIY LQEHRQLQNI SPLSSFMQGN IPNGLLPPAL PPLRDFDPAF SLLLTNPPLA TMVHGTTSSS MGNATTVSTQ
601: PQEIVNPGAS SNPQLNQSQP STSTSIASGP PLPQHLTLHP YAQATLPLGY ASMIGYPSLA PSYTYLPPPA FQQPYMNSGL FHQAAAAVPN SSVKYPLPQY
701: KGNVSLASLP QQASLLSSYV GGFGAASSMP GNFALNQSTP SATAAPGFDG TVPAQYKEGN QFVSLQQSEN AAMWMHGASS RTMPPLAANA LYYQGQQGHQ
801: GGLRQGQLPS QFGAPLAPTQ PGLGHEHRNP SDGNLSSAAA AAQANQMWPN SY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
RNA polymerase II degradation factor-like protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q8VZT4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.