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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78828 Canola nucleus 83.11 88.11
AT4G18150.1 Thale cress nucleus 70.68 69.0
KRH38470 Soybean endoplasmic reticulum 6.35 59.49
CDY61561 Canola cytosol 4.05 45.45
Solyc09g018250.2.1 Tomato plastid 5.81 40.57
KRH36716 Soybean nucleus 43.38 38.31
KRH11725 Soybean nucleus 43.38 38.21
VIT_10s0003g02740.t01 Wine grape nucleus 44.86 38.12
CDX90188 Canola nucleus 42.3 38.08
CDY43334 Canola nucleus 42.3 38.08
CDY48333 Canola nucleus 42.03 37.79
CDX94662 Canola nucleus 40.81 37.52
KRH59101 Soybean nucleus 42.7 37.4
KRH42968 Soybean nucleus 41.89 37.04
CDY15632 Canola nucleus 39.32 37.02
Solyc03g005750.2.1 Tomato nucleus 41.76 36.65
Solyc02g071180.2.1 Tomato nucleus 41.22 36.61
PGSC0003DMT400007972 Potato nucleus 41.35 36.6
CDX99817 Canola nucleus 30.41 36.29
CDX84653 Canola nucleus 39.05 35.55
CDY43685 Canola nucleus 39.73 35.42
VIT_19s0014g03260.t01 Wine grape nucleus 10.0 34.91
CDY08888 Canola nucleus 26.89 34.49
CDY61562 Canola nucleus 35.41 34.38
CDX76544 Canola nucleus 25.68 33.39
Zm00001d035703_P001 Maize nucleus 11.62 31.85
CDY37665 Canola cytosol, nucleus, plastid 28.65 31.64
KXG33052 Sorghum nucleus 32.97 29.65
Os05t0566900-01 Rice extracellular 34.05 29.58
GSMUA_Achr7P25510_001 Banana nucleus 33.11 29.34
GSMUA_Achr4P14940_001 Banana nucleus 33.38 29.09
TraesCS3A01G241400.3 Wheat nucleus 31.76 28.87
TraesCS3B01G269500.1 Wheat nucleus 32.7 28.64
TraesCS3D01G241600.2 Wheat nucleus 32.57 28.59
Zm00001d011517_P002 Maize nucleus 32.16 28.33
Zm00001d017358_P001 Maize nucleus 4.19 28.18
Os01t0663800-01 Rice plasma membrane 32.3 28.08
HORVU3Hr1G060080.3 Barley cytosol, nucleus, vacuole 32.84 27.93
Zm00001d043962_P001 Maize nucleus 31.76 27.91
TraesCS1B01G433400.1 Wheat nucleus 32.84 27.84
KXG22544 Sorghum nucleus 32.16 27.8
TraesCS1D01G411700.1 Wheat nucleus 32.57 27.7
TraesCS1A01G403900.1 Wheat nucleus 32.3 27.57
Zm00001d009591_P006 Maize nucleus 31.89 27.54
GSMUA_Achr4P07880_001 Banana nucleus 33.78 27.47
Zm00001d015193_P001 Maize nucleus, plastid 8.11 26.79
GSMUA_Achr3P31170_001 Banana nucleus 31.76 26.77
Zm00001d039041_P007 Maize nucleus 32.3 26.5
Zm00001d039138_P012 Maize nucleus 29.32 26.18
KXG22612 Sorghum nucleus 28.92 25.72
HORVU1Hr1G089280.1 Barley nucleus 32.7 25.55
TraesCS1D01G428100.1 Wheat nucleus 28.51 24.77
TraesCS1A01G420300.1 Wheat nucleus 28.24 24.73
Zm00001d009683_P004 Maize nucleus 27.84 24.21
Zm00001d035814_P001 Maize cytosol, mitochondrion, nucleus, plastid, vacuole 5.0 24.18
Os05t0581800-01 Rice nucleus 27.03 23.47
Zm00001d004950_P001 Maize nucleus 9.73 23.23
CDY11787 Canola nucleus 23.11 23.2
HORVU1Hr1G091730.18 Barley mitochondrion 25.68 22.04
TraesCS1B01G450700.1 Wheat nucleus 25.14 21.81
CDY35953 Canola nucleus 20.27 18.4
CDY22126 Canola nucleus 20.0 18.07
CDY28028 Canola nucleus 19.59 17.95
CDY24202 Canola nucleus 13.38 17.55
CDY43361 Canola nucleus 13.11 16.75
CDY53767 Canola nucleus 12.97 15.61
CDY65326 Canola nucleus 17.03 14.81
CDX97535 Canola nucleus 17.16 14.72
CDY39087 Canola nucleus 17.16 14.55
CDY72379 Canola cytosol, nucleus, plastid 2.57 14.39
CDY33258 Canola nucleus 16.89 14.35
CDY53764 Canola extracellular, vacuole 7.97 13.59
Protein Annotations
EnsemblPlants:CDY61669EnsemblPlantsGene:GSBRNA2T00034166001GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:GIP1
InterPro:UBA-like_sfPANTHER:PTHR12758PANTHER:PTHR12758:SF20PFAM:PF06972ProteinID:CDY61669ProteinID:CDY61669.1
SEG:segSUPFAM:SSF46934UniParc:UPI0004EE33ADUniProt:A0A078J8E3MapMan:35.2:
Description
BnaC01g40800DBnaC01g40800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8E3]
Coordinates
chrLK034024:-:17030..20776
Molecular Weight (calculated)
80774.8 Da
IEP (calculated)
5.344
GRAVY (calculated)
-0.958
Length
740 amino acids
Sequence
(BLAST)
001: MGGRGGGGDV SNAKTGGVPA SSRKVVESLK EIVNCSDLEI YAMLVDCDMD PDETVSRLLS QDTFHEVKSK RDKKKETKDP AESWTRSTPN RGARSGGYDG
101: YNTSRGGGNR FKSSERASVQ SVPVNRRENG TRNHWAGSSS TPGVLGRQPP PNSDPTNSEV KKAQPAGSTE GVTSSSLPTP AYQSAWANAN PGQRTMADIV
201: KMGRPLHQKK NVAVPRSTET QESGSKAPLK DEWPSIQKQV VSYPTSSSLL KPAAESEVPV DQFSEPQHLN ETPLDDVPVA SPPASVSNRN LLDDDDDDAA
301: RDSSEYEDEN NKVEPHAFEE NRGEDVSASV ATGFEQLTIE NEEDHETLIK EDKPPVIIPS HLQVHTSECS HLMFGSFGLG LGSGQASSGL NDSLEATKET
401: EDNSSFRHPE SDFYGEEEEQ LTELRNADHQ YKFSSPPDYG FENSQQLNPP SETNPQMQSL DNFPNAMHQG IQDAREPDLH YSPFPTKYNN PTPSSLSGSM
501: AEALRASSIS PQNAMPSGAG EQAAALAQHL ALNPYSHQPG MPLGHYGNLM SYPFMPQSYN PYMPSAFQQA FPSGNHHQSM LPQYKTQATA PPVPPPSAYG
601: FGGGGSALSS NFPLNSTSAP NSYEDVLSSQ FRDSNHLASS LQQQNEHLAA WHQGQQSNSR VVPGSGYYSH QNQQPPGFRQ AQLLQQPSQQ QQQQHFGGHS
701: YGSHYHSQAS MSLDHLHHQQ QQNARDASKQ THQQLWPNNY
Best Arabidopsis Sequence Match ( AT4G18150.1 )
(BLAST)
001: MGGGGGSVSN ANGGVPASSR KVIQDLKEIV ECSELEIYAM LVECDMNPDE AVNRLLSQDT FHEVKSKREK KKETKDHADS WTRNVPNRGA RSGNDSYNTS
101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE
201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV
301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN
401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN
501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ
601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA
701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT4G18150]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.