Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029667.1-P | Field mustard | nucleus | 95.34 | 94.07 |
| CDY28028 | Canola | nucleus | 92.88 | 93.69 |
| CDY22126 | Canola | nucleus | 81.72 | 81.32 |
| AT3G07660.1 | Thale cress | nucleus | 81.72 | 79.19 |
| KRH16977 | Soybean | nucleus | 50.92 | 47.27 |
| KRH72609 | Soybean | nucleus | 50.43 | 46.49 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 50.55 | 45.98 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 43.07 | 41.84 |
| Solyc07g045230.2.1 | Tomato | nucleus | 44.66 | 41.55 |
| CDY61561 | Canola | cytosol | 3.31 | 40.91 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 42.82 | 39.79 |
| Solyc05g018750.2.1 | Tomato | nucleus | 39.75 | 39.71 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 25.89 | 39.51 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 41.1 | 38.86 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 37.42 | 37.01 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 37.42 | 37.01 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 37.18 | 36.77 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 28.47 | 36.14 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 36.93 | 33.78 |
| KXG24955 | Sorghum | nucleus | 30.8 | 30.87 |
| Zm00001d050112_P011 | Maize | nucleus | 30.43 | 29.28 |
| CDY72379 | Canola | cytosol, nucleus, plastid | 4.17 | 25.76 |
| CDY24202 | Canola | nucleus | 17.06 | 24.65 |
| CDY43361 | Canola | nucleus | 17.3 | 24.35 |
| CDY53764 | Canola | extracellular, vacuole | 12.76 | 23.96 |
| CDY53767 | Canola | nucleus | 16.56 | 21.95 |
| CDX78828 | Canola | nucleus | 17.91 | 20.92 |
| CDY61669 | Canola | nucleus | 18.4 | 20.27 |
| CDY15632 | Canola | nucleus | 18.4 | 19.08 |
| CDY08888 | Canola | nucleus | 13.5 | 19.06 |
| CDY48333 | Canola | nucleus | 19.14 | 18.95 |
| CDY65326 | Canola | nucleus | 19.75 | 18.92 |
| CDX84653 | Canola | nucleus | 18.77 | 18.82 |
| CDX76544 | Canola | nucleus | 13.13 | 18.8 |
| CDX90188 | Canola | nucleus | 18.9 | 18.73 |
| CDX97535 | Canola | nucleus | 19.75 | 18.66 |
| CDY43334 | Canola | nucleus | 18.65 | 18.49 |
| CDY43685 | Canola | nucleus | 18.77 | 18.43 |
| CDX94662 | Canola | nucleus | 17.91 | 18.14 |
| CDY33258 | Canola | nucleus | 18.65 | 17.45 |
| CDY39087 | Canola | nucleus | 18.65 | 17.41 |
| CDX99817 | Canola | nucleus | 13.01 | 17.1 |
| CDY61562 | Canola | nucleus | 15.71 | 16.8 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 12.64 | 15.37 |
| CDY11787 | Canola | nucleus | 10.18 | 11.26 |
Protein Annotations
| EnsemblPlants:CDY35953 | EnsemblPlantsGene:GSBRNA2T00059508001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 | PFAM:PF06972 | ProteinID:CDY35953 | ProteinID:CDY35953.1 |
| SEG:seg | SUPFAM:SSF46934 | UniParc:UPI0004EE91F2 | UniProt:A0A078HGI3 | MapMan:35.2 | : |
Description
BnaA05g29970DBnaA05g29970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGI3]
Coordinates
chrLK032364:-:124125..129001
Molecular Weight (calculated)
87180.4 Da
IEP (calculated)
6.870
GRAVY (calculated)
-0.716
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGSGARVSI DADTRKTIQT IKEITAGNYS EDEIHAMLLD CSMNPDEAAQ RLLLQDPFLE VKKKRDKRKE NLSNKDSVEP QWRSGGPGRG SRGGRMNFSS
101: RHSSHDGAGA KNSFRKENSP KQVADPSTST SQQQIKTKDN ALVCSLPPVM DKSSVGLTSG SPDGAPSAVE SSKNRVALGS NAVHTEQKSA NSLPLSRPSS
201: SEVRFTSSNS KPVSEQHLGQ SKLQNRSRGV GKATVNDAYV PRPASSHSNS TGSRPSSNYS NRSHHTVGPQ RVKEWKPKPV NHTTTQGSGA SATTEALAVP
301: TEASEKSVED VVPSAEGTSK LQRQLEDLQI QRQHVIIPNH ILVPEAERTK FSFGSFDAGF SITSSSVAFP ENEKRSAPLS QNSQEVENSL EEDELSHPNV
401: HSTEKDEENN VYSESPSQVP NDIAGEGITA ANAASVYDVS KQENMLESES NQSPFDHVPS NITGPVPPAP GSQLPQFENA DPQARDALRI PNFVVQQPFD
501: TASYYAQFYR SGPDSDGRVS PFVSPGVASK FNGNVTVLPP HSSQTMQESG NNSVLSTASP TPLVTQPAGL MQSSIPVTQQ PVPFLRPPGL HMSHYPPNYM
601: PYGHYFSPFY LPHPAMQQFL SNGAFAQQPQ ASSVYPPPPP PGAATGGKYT FPHHKPGSNN TGNLTHVGTP GVYGSPSHGS FPAGYNPNSA ASAVNSTSNE
701: DLNTLQLKEN NGYSTTGQQS EALPVWIAGP GRDVPSSFYG LQHHGQHVTY APAQAGHVTF PGMYHPGQAV TAAGGVHHPL LQQSQGVAGA EMVAPGPPNV
801: FPQPQQTPMN WPSNY
101: RHSSHDGAGA KNSFRKENSP KQVADPSTST SQQQIKTKDN ALVCSLPPVM DKSSVGLTSG SPDGAPSAVE SSKNRVALGS NAVHTEQKSA NSLPLSRPSS
201: SEVRFTSSNS KPVSEQHLGQ SKLQNRSRGV GKATVNDAYV PRPASSHSNS TGSRPSSNYS NRSHHTVGPQ RVKEWKPKPV NHTTTQGSGA SATTEALAVP
301: TEASEKSVED VVPSAEGTSK LQRQLEDLQI QRQHVIIPNH ILVPEAERTK FSFGSFDAGF SITSSSVAFP ENEKRSAPLS QNSQEVENSL EEDELSHPNV
401: HSTEKDEENN VYSESPSQVP NDIAGEGITA ANAASVYDVS KQENMLESES NQSPFDHVPS NITGPVPPAP GSQLPQFENA DPQARDALRI PNFVVQQPFD
501: TASYYAQFYR SGPDSDGRVS PFVSPGVASK FNGNVTVLPP HSSQTMQESG NNSVLSTASP TPLVTQPAGL MQSSIPVTQQ PVPFLRPPGL HMSHYPPNYM
601: PYGHYFSPFY LPHPAMQQFL SNGAFAQQPQ ASSVYPPPPP PGAATGGKYT FPHHKPGSNN TGNLTHVGTP GVYGSPSHGS FPAGYNPNSA ASAVNSTSNE
701: DLNTLQLKEN NGYSTTGQQS EALPVWIAGP GRDVPSSFYG LQHHGQHVTY APAQAGHVTF PGMYHPGQAV TAAGGVHHPL LQQSQGVAGA EMVAPGPPNV
801: FPQPQQTPMN WPSNY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.