Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050112_P011 | Maize | nucleus | 85.12 | 81.7 |
| Os09t0261400-01 | Rice | plasma membrane | 5.78 | 58.75 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 32.84 | 50.0 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 49.82 | 49.15 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 49.82 | 49.15 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 49.32 | 48.66 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 50.43 | 46.02 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 42.8 | 41.48 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 44.65 | 41.39 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 39.98 | 37.7 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 39.98 | 36.27 |
| KRH16977 | Soybean | nucleus | 38.01 | 35.19 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 27.68 | 35.05 |
| KRH72609 | Soybean | nucleus | 38.01 | 34.95 |
| Solyc07g045230.2.1 | Tomato | nucleus | 36.16 | 33.56 |
| Solyc05g018750.2.1 | Tomato | nucleus | 33.09 | 32.97 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 31.37 | 32.44 |
| Bra040021.1-P | Field mustard | nucleus | 32.47 | 32.12 |
| CDY22126 | Canola | nucleus | 32.35 | 32.11 |
| AT3G07660.1 | Thale cress | nucleus | 32.84 | 31.75 |
| CDY28028 | Canola | nucleus | 31.24 | 31.44 |
| CDY35953 | Canola | nucleus | 30.87 | 30.8 |
| Bra029667.1-P | Field mustard | nucleus | 30.87 | 30.39 |
| KRH73929 | Soybean | nucleus | 26.57 | 28.27 |
| KRH14203 | Soybean | nucleus | 26.69 | 28.07 |
| PGSC0003DMT400057353 | Potato | nucleus | 24.11 | 25.23 |
| EER88029 | Sorghum | nucleus | 22.26 | 21.07 |
| KXG33052 | Sorghum | nucleus | 18.08 | 17.86 |
| KXG22544 | Sorghum | nucleus | 18.57 | 17.64 |
| KXG39164 | Sorghum | nucleus | 14.88 | 15.43 |
| KXG22612 | Sorghum | nucleus | 15.38 | 15.02 |
Protein Annotations
| EnsemblPlants:KXG24955 | EnsemblPlantsGene:SORBI_3007G103600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF13 |
| PFAM:PF06972 | ProteinID:KXG24955 | ProteinID:KXG24955.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00081AB46C |
| UniProt:A0A1B6PHA7 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:32001081..32035167
Molecular Weight (calculated)
85468.4 Da
IEP (calculated)
6.546
GRAVY (calculated)
-0.413
Length
813 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGGRVSIP AGARRTVADI KEIAGGHTDE EVYAMLRECN MDPNETAQRL LLEDTFHEVK RKRDKKKEGS KEPSDSRWRP AMQGRGGKSG RGNYSSRTLS
101: SSNDSAGRSA ISGKENGISL ITGKGSGSTP IINANMDVKA STSMPSLLSG LRNGPYQPVD SPAVLVTSSS AVGDKSGSTA LADLTGGLPF EDVVTTIGPN
201: LLQPLRPAPL SDPVVVSFLD SHSLGDVGAS RQTIGIKKTS VEHKVGRDLP TNKGSSEQSV PSSFGRSSAS RPSSSYNSRS QQSQKVIPSK EWKPKLTCSA
301: ASQATGDVTI HDNAPLAADV IPQSAPVSNS AGTEDPLKVD KYFSDLQLSD KLHVIIPDHL QVSESEKYGL SFGSFDVSFQ QTMGSSDPEC VKSSLPKFDS
401: SHELNGSIDK PQSMQRDQNS TSTVQEEAGL VPQPSAKVEN CAPSAVGISS IAPMEPKECE DYSATSGDPQ STAIYSAPFY LTYGLAPQSH VYQIEKSESH
501: SQSKQAVDFS TKSYHPATDA DERLTPSLAA QAAHTYGNIP VVAAQTGQDQ EGNNSPVIIS SVSASVATPA AGVLSASVAI PQQPVPVFCQ PFGVHIPHLQ
601: TNCVPYNHYI SPFFIPPPTL HPFMGNATFA QPPSTGAMYP TPGSAGVLPP VKYSVPSFKP GANTGSQASI GVPGGHGTYG SSPSVYTNNA PVSSGNLTEN
701: DNVTSSQFKE NSIYIAGLQT DGLTLWVPTP RRDISALQVN SFYGMPPQGQ QVTYAPQAGH GPYGGIYHPA HSVTGAAVHP LLQPSHSMAG AVEIVGAPGV
801: YQHPQAQINW GSY
101: SSNDSAGRSA ISGKENGISL ITGKGSGSTP IINANMDVKA STSMPSLLSG LRNGPYQPVD SPAVLVTSSS AVGDKSGSTA LADLTGGLPF EDVVTTIGPN
201: LLQPLRPAPL SDPVVVSFLD SHSLGDVGAS RQTIGIKKTS VEHKVGRDLP TNKGSSEQSV PSSFGRSSAS RPSSSYNSRS QQSQKVIPSK EWKPKLTCSA
301: ASQATGDVTI HDNAPLAADV IPQSAPVSNS AGTEDPLKVD KYFSDLQLSD KLHVIIPDHL QVSESEKYGL SFGSFDVSFQ QTMGSSDPEC VKSSLPKFDS
401: SHELNGSIDK PQSMQRDQNS TSTVQEEAGL VPQPSAKVEN CAPSAVGISS IAPMEPKECE DYSATSGDPQ STAIYSAPFY LTYGLAPQSH VYQIEKSESH
501: SQSKQAVDFS TKSYHPATDA DERLTPSLAA QAAHTYGNIP VVAAQTGQDQ EGNNSPVIIS SVSASVATPA AGVLSASVAI PQQPVPVFCQ PFGVHIPHLQ
601: TNCVPYNHYI SPFFIPPPTL HPFMGNATFA QPPSTGAMYP TPGSAGVLPP VKYSVPSFKP GANTGSQASI GVPGGHGTYG SSPSVYTNNA PVSSGNLTEN
701: DNVTSSQFKE NSIYIAGLQT DGLTLWVPTP RRDISALQVN SFYGMPPQGQ QVTYAPQAGH GPYGGIYHPA HSVTGAAVHP LLQPSHSMAG AVEIVGAPGV
801: YQHPQAQINW GSY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.