Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73929 | Soybean | nucleus | 43.64 | 44.9 |
| KRH14203 | Soybean | nucleus | 43.64 | 44.37 |
| VIT_12s0057g01290.t01 | Wine grape | nucleus | 47.33 | 41.52 |
| Os09t0261400-01 | Rice | plasma membrane | 4.2 | 41.25 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 41.35 | 38.74 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 42.37 | 38.63 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 42.75 | 38.31 |
| PGSC0003DMT400057353 | Potato | nucleus | 35.62 | 36.04 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 29.26 | 35.83 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 36.39 | 34.71 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 23.54 | 34.64 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 36.26 | 34.59 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 36.26 | 34.59 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 35.88 | 31.65 |
| KXG24955 | Sorghum | nucleus | 32.44 | 31.37 |
| Zm00001d050112_P011 | Maize | nucleus | 31.68 | 29.4 |
| VIT_04s0043g00960.t01 | Wine grape | mitochondrion | 8.27 | 25.39 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 6.62 | 24.53 |
| VIT_09s0002g01530.t01 | Wine grape | nucleus | 24.3 | 23.61 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 20.99 | 18.94 |
Protein Annotations
| EntrezGene:100258374 | wikigene:100258374 | MapMan:35.1 | EMBL:AM439620 | ProteinID:CAN73914 | ProteinID:CAN73914.1 |
| ProteinID:CBI39778 | ProteinID:CBI39778.3 | UniProt:D7UAL3 | EMBL:FN596747 | InterPro:GIP1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EntrezGene:LOC100258374 | wikigene:LOC100258374 | PFAM:PF06972 | PANTHER:PTHR12758 |
| PANTHER:PTHR12758:SF30 | SUPFAM:SSF46934 | InterPro:UBA-like_sf | UniParc:UPI0001985811 | ArrayExpress:VIT_19s0015g00930 | EnsemblPlantsGene:VIT_19s0015g00930 |
| EnsemblPlants:VIT_19s0015g00930.t01 | unigene:Vvi.6960 | RefSeq:XP_002267389 | RefSeq:XP_002267389.2 | RefSeq:XP_010644609.1 | SEG:seg |
Description
No Description!
Coordinates
chr19:+:9040241..9050695
Molecular Weight (calculated)
83046.8 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.570
Length
786 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDGGGGGGE DTSSRVLIPK DARKMVQDIK EIARKHSDED VYAMLQECAM DPNEAVQRLL YLDTFHEVKK KRDRKKESSN NRASESDRRR SGIQGRGAWT
101: GRGNYSSHNF SHDAGFGRNA AQKENGVHPR TARGFTHSSL PLSRRAQNNA TPPNVPKSST VSSNGASSVS NGSSNHVLVP GLAAGDVNTI PKDNSVAIIN
201: KSGNGPSVLI SGVECPPGTM PKHSFASVVG VKQGSSNSTS HTTPTSVSGV YSSASDSVLV PSPSSCLPDT MGTIKHEVSQ SAGVETNQLP ELSESLSLST
301: HDDSLIIDSS STHESQSSLQ FTGPSKAPDS ETEVATMIAE DNSQLITESN VSVLEEATSN LHISDARHVI FRNHLQIPEA LKNGLVFGSF DSSFSLGSKY
401: ANGPDVEKSP TPAESSQENI EITKGPSPSN QSVASTAQEE DYPDQPQSPP HAPENLSPPV GSVSSGAVPK HDQSKQEMLL PTGGPHFPVV QPLPNYSFGF
501: MPPMLGSSLV QFEGPDAQAQ DNSHSPNIVR GNSLVLSAPS PTPPATQPAG IMQTSIPVSP QSVPVFRPPY PPNYFPYSNY YPPFYVPPAI HQFLSHTGFP
601: QQPPTGNVYV PTAATAAGVK LSHPQYKPGN NTGNSGHIGI LPGYGSYSTS QVGYSPSSAV NAGSSTANVD LAASQLKENN IYTNRQQSEG SAVWIPAPGH
701: DISSLQSNSL FNLSTQGQHP TFSPAQAGHG AFTGMYHPTQ TMAAPPTVHS LLQQSQSMAG SVDMMGPPGS GYQPPQHAQI NWNPNY
101: GRGNYSSHNF SHDAGFGRNA AQKENGVHPR TARGFTHSSL PLSRRAQNNA TPPNVPKSST VSSNGASSVS NGSSNHVLVP GLAAGDVNTI PKDNSVAIIN
201: KSGNGPSVLI SGVECPPGTM PKHSFASVVG VKQGSSNSTS HTTPTSVSGV YSSASDSVLV PSPSSCLPDT MGTIKHEVSQ SAGVETNQLP ELSESLSLST
301: HDDSLIIDSS STHESQSSLQ FTGPSKAPDS ETEVATMIAE DNSQLITESN VSVLEEATSN LHISDARHVI FRNHLQIPEA LKNGLVFGSF DSSFSLGSKY
401: ANGPDVEKSP TPAESSQENI EITKGPSPSN QSVASTAQEE DYPDQPQSPP HAPENLSPPV GSVSSGAVPK HDQSKQEMLL PTGGPHFPVV QPLPNYSFGF
501: MPPMLGSSLV QFEGPDAQAQ DNSHSPNIVR GNSLVLSAPS PTPPATQPAG IMQTSIPVSP QSVPVFRPPY PPNYFPYSNY YPPFYVPPAI HQFLSHTGFP
601: QQPPTGNVYV PTAATAAGVK LSHPQYKPGN NTGNSGHIGI LPGYGSYSTS QVGYSPSSAV NAGSSTANVD LAASQLKENN IYTNRQQSEG SAVWIPAPGH
701: DISSLQSNSL FNLSTQGQHP TFSPAQAGHG AFTGMYHPTQ TMAAPPTVHS LLQQSQSMAG SVDMMGPPGS GYQPPQHAQI NWNPNY
001: MVGSGARVSI SATTRKMIQN IKETTAGNYS EDEIIAMLHE CNMDPDETAQ RLLLQDPFHE VKKKRDKRKE NINNKDSAES QWRSGGGGRG SRGGRMNFSS
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
101: RHASNDVAGA KNSFKKENGP KQVIDPSTST SQEIKTKDIA LVSSHSAVMD KSTVGPKSGS SDVRQSSNLP AGSGQLKAGR SSVPSNNIDG APSSVELSKN
201: RVAVGSRVVH TEQKAVDSLP LPRPSSSEVR FTSSNPKSEQ TAPEQHIGES KSHTRSRGVG KTAVNDTYGS RPASSHSNST GSRPSSNYSN RSHQTVGPQR
301: GAGSIKEWKP KPVVNHNTTQ GSGASSTGET LAVPTEASDK SVEDATPSAE ATSRLQRQLE DLQIQRQHVI IPNHILVPEA ERTKLSFGSF DADFSITSST
401: VAFPQSEKRS APLSHNSQEV EESFAEEEFR HPTVHSIEKE EDGNVYSESP SQVPDNMAGE GNTATNTAPE YDVTKQENML ESESNQNSFD QVPSNIIGIV
501: PPAPGNQHPQ FETSDPQARD ALRLPSFMGQ QPFDTASYYA QFYRSGPDSD GRVSPFVSPG VASKFNGITV LPPHSSQTMQ EGGNNLVLST ASPPPLVTQA
601: AGLMQSSIPV TQQPVPVFRP PGLHMSHYPP NYVPYGYFSP FYLPPPTMHQ YLSNGAYAQQ PQASGVYPPP PGTATGGKYT LPHYKPGTNT GNMTHVGITG
701: GYGPTYGSFP AGYNPTSAAS AGNSTSNEDL NSLQLKENNG YSTTGQQSEA LPVWITGPGR DVPSSFYGLQ HHGQHVTYAP AQAGHVAFPG MYHPGQAVTA
801: TGVHHPLLQQ SQGVAGAEMV APAPNVFQQP QQTQMNWPSN Y
Arabidopsis Description
Flocculation protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q0WUY5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.