Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73929 | Soybean | nucleus | 90.43 | 91.49 |
| Os09t0261400-01 | Rice | plasma membrane | 4.66 | 45.0 |
| VIT_19s0015g00930.t01 | Wine grape | nucleus | 44.37 | 43.64 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.27 | 41.77 |
| GSMUA_Achr7P06080_001 | Banana | nucleus | 36.09 | 33.25 |
| KRH16977 | Soybean | nucleus | 37.52 | 33.03 |
| GSMUA_Achr1P19270_001 | Banana | nucleus | 36.22 | 32.48 |
| KRH72609 | Soybean | nucleus | 37.13 | 32.47 |
| GSMUA_Achr3P12040_001 | Banana | nucleus | 36.48 | 32.16 |
| PGSC0003DMT400057353 | Potato | nucleus | 31.44 | 31.27 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 32.34 | 30.34 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 32.08 | 30.1 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 31.82 | 29.85 |
| GSMUA_Achr1P09420_001 | Banana | cytosol, nucleus, peroxisome | 24.45 | 29.44 |
| HORVU5Hr1G052360.1 | Barley | cytosol, nucleus | 20.05 | 29.03 |
| HORVU5Hr1G052340.1 | Barley | cytosol | 31.95 | 27.72 |
| KXG24955 | Sorghum | nucleus | 28.07 | 26.69 |
| Zm00001d050112_P011 | Maize | nucleus | 27.81 | 25.38 |
| KRH06147 | Soybean | nucleus | 23.16 | 20.81 |
| KRH47571 | Soybean | nucleus | 23.16 | 20.74 |
| KRH36716 | Soybean | nucleus | 20.31 | 18.74 |
| KRH11725 | Soybean | nucleus | 20.18 | 18.57 |
| KRH59101 | Soybean | nucleus | 19.92 | 18.22 |
| KRH42968 | Soybean | nucleus | 19.15 | 17.68 |
| KRG98923 | Soybean | nucleus | 3.36 | 12.87 |
| KRH46046 | Soybean | nucleus | 13.07 | 12.45 |
Protein Annotations
| EMBL:ACUP02008494 | EnsemblPlants:KRH14203 | EnsemblPlantsGene:GLYMA_14G012200 | EntrezGene:100815261 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF30 | PFAM:PF06972 |
| ProteinID:KRH14203 | ProteinID:KRH14203.1 | SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00023D3709 | UniProt:I1M6E7 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:920516..926424
Molecular Weight (calculated)
81285.3 Da
IEP (calculated)
6.941
GRAVY (calculated)
-0.620
Length
773 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGSSSC ARVPIPNNVR KIIQDIREIT GKQHTDDEIY AVLRECSMDP NETAQKLLYL DTFHEVRRRR DRKKEGLSSR ASDEPRLKQG GQGRGGRGGS
101: GGYSSNFPGT ISPPFRDGGG GRNQANRREN GVNHIAERSH APSTQPFSQK TKTNTTSQAT RVSAVAPQGA ANQSNGKSGH DSGGQSPIVS VPKSTSAAKD
201: TGHQENVQPQ AAVVAAASSS TQTFGSVTSS NQGMSVSSSD QLQTSVSDVH SSLDPVVASS VSRSLGVSGA ISREVVSNRI SAGPNHVRGS KVVHEVNDLS
301: ASKNEKYGSM NSASKTNSPQ KLNEVENNHL SEPSQLPSPS PNDSLRPSSS SGSQSPLANT TEVSTSEACV QSSAELRQHV TFPNHFQVSK ALKSGLTFGS
401: FDTLGPSEKS NSETDGDNNA SPALELSDEA ATSSNQSASL TAQGDHLDYP HSSSYLIEKA PATNGNPITG TDTKVDQSKK EVLLAPEGQQ IPTVQTAQNY
501: GLNFISSMLG TQQVQFEGTE PQSQDTSRFP NFVNASSQAV SPSPTPPLQN SIPVTPQSVS IFRPPYPANF FPYGHYYPPI YVSPIHQFLN HNGFPQQPSA
601: GSMYLPAAAG IKFPLPQFKA GANTGNAAHI GIPSGSFITP PVGYAPGQTV NTGSSTGNED LVVSQLKENQ IYTTGQLSEG SAVWIPAPGQ DMSSLQVNSL
701: YNLGPQGQHL TFPPTQAAQG AFAGMYQAGQ TIASPSTLLQ QSQAVAGPVE TVGPPSGSYQ QPQPAQINWN SNF
101: GGYSSNFPGT ISPPFRDGGG GRNQANRREN GVNHIAERSH APSTQPFSQK TKTNTTSQAT RVSAVAPQGA ANQSNGKSGH DSGGQSPIVS VPKSTSAAKD
201: TGHQENVQPQ AAVVAAASSS TQTFGSVTSS NQGMSVSSSD QLQTSVSDVH SSLDPVVASS VSRSLGVSGA ISREVVSNRI SAGPNHVRGS KVVHEVNDLS
301: ASKNEKYGSM NSASKTNSPQ KLNEVENNHL SEPSQLPSPS PNDSLRPSSS SGSQSPLANT TEVSTSEACV QSSAELRQHV TFPNHFQVSK ALKSGLTFGS
401: FDTLGPSEKS NSETDGDNNA SPALELSDEA ATSSNQSASL TAQGDHLDYP HSSSYLIEKA PATNGNPITG TDTKVDQSKK EVLLAPEGQQ IPTVQTAQNY
501: GLNFISSMLG TQQVQFEGTE PQSQDTSRFP NFVNASSQAV SPSPTPPLQN SIPVTPQSVS IFRPPYPANF FPYGHYYPPI YVSPIHQFLN HNGFPQQPSA
601: GSMYLPAAAG IKFPLPQFKA GANTGNAAHI GIPSGSFITP PVGYAPGQTV NTGSSTGNED LVVSQLKENQ IYTTGQLSEG SAVWIPAPGQ DMSSLQVNSL
701: YNLGPQGQHL TFPPTQAAQG AFAGMYQAGQ TIASPSTLLQ QSQAVAGPVE TVGPPSGSYQ QPQPAQINWN SNF
001: MSSSDGGSSR VSIPYHLRKT LQKIREYTGK QHSDEDIFAV YKDSFNDPHE TAQKLLFLDT FHEVRSKREK KKEPIVPVTQ PSGRGGRRNF ASSNSYQGSG
101: RNASFKRENG ANHVTRGSRT AQPATNKASN ITVPNETKVS GPASIPSEVS NHKAQDDPSL ISASRCSSKS DQAIEIETAS KQGKNQSLPK PDVSEQSHVT
201: FPFHLQVAKG LQNGLTFGSF DSNFVKEVSS SNGASGGYDS NFESSHGTGD DERESSPTTN GITGVASARE ETSTVSEDKD YGISNSATGA EPVVHSDHIV
301: PPVEEVPKEE ALSNTETHQI AYGQEAPLSV FGLVPSLSAI GQPVNTEAAE TQPGNSNSPP ISLVSYPPDQ SSIAAATQQT NFLRQQYPPN FFPYGYYSPY
401: YMPPPYIHQF LSPNGIPQQS YFPQGAALTA PSHAKPVDNT ENPPTTNPYL HTSPMVASSI PSTTTLNSIH SEEKASHLTE SAAAWIGQGF GNLQVNPMYN
501: LAYQGQPLGF PVVQAGHGGL MGMHQPTQPM AAASTTYQTL PPPPHTTTAM GEPIGHPHIA YQQPQAALTN WVNNY
101: RNASFKRENG ANHVTRGSRT AQPATNKASN ITVPNETKVS GPASIPSEVS NHKAQDDPSL ISASRCSSKS DQAIEIETAS KQGKNQSLPK PDVSEQSHVT
201: FPFHLQVAKG LQNGLTFGSF DSNFVKEVSS SNGASGGYDS NFESSHGTGD DERESSPTTN GITGVASARE ETSTVSEDKD YGISNSATGA EPVVHSDHIV
301: PPVEEVPKEE ALSNTETHQI AYGQEAPLSV FGLVPSLSAI GQPVNTEAAE TQPGNSNSPP ISLVSYPPDQ SSIAAATQQT NFLRQQYPPN FFPYGYYSPY
401: YMPPPYIHQF LSPNGIPQQS YFPQGAALTA PSHAKPVDNT ENPPTTNPYL HTSPMVASSI PSTTTLNSIH SEEKASHLTE SAAAWIGQGF GNLQVNPMYN
501: LAYQGQPLGF PVVQAGHGGL MGMHQPTQPM AAASTTYQTL PPPPHTTTAM GEPIGHPHIA YQQPQAALTN WVNNY
Arabidopsis Description
GIP1LGBF-interacting protein 1-like [Source:UniProtKB/Swiss-Prot;Acc:A4FVR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.